FFCP PHASE1:Hg19::chr4:1873100..1873152,+: Difference between revisions
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{{FFCP | 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284,2.19303106742873,4.96211178389294,1.05522746615772,4.72720982266503,10.7140367175657,19.168172166473,3.03482802118316,7.28519012324152,2.30626162422861,12.3300366684684,8.91737649074576,7.0688522295905,8.74777888385893,14.1832609060762,7.45250392676863,4.00314773537622,11.4694380638681,3.64353812307926,12.7842220871329,4.31855182437243,11.4660405092892,5.0748346365426,20.5417695252545,20.1097665886857,18.0812603194683,4.00855682365126,2.90102629828252,1.19502933965765,4.14755797088455,3.8720462293825,10.2948840635592,10.0551817615806,1.69354820076372,6.4149923192334,2.79185747097888,5.7332336338646,6.04019331708079,9.52057266067857,8.04658304882978,1.94228651156368,3.07988420568741,5.799072156691,2.91426595835484,16.3757624423474,9.54963720774568,8.68116662676251,19.9914565208959,12.6431594257243,18.2665040715675,4.63044948647668,6.77534637562268,10.817297816315,6.61900468735545,12.0195039021829,4.51509474364374,10.396624011448,8.0304588240846,12.7445336015863,3.47740496525458,9.53976742008942,9.39446865694332,5.17806421956407,1.76447435857846,3.5306201343234,5.11235471772562,2.75237570042724,10.177110403753,6.1530909255342,8.97487670520074,9.5997151874883,4.2322147241232,6.69591032700152,3.69740502905135,4.32626562123789,14.6353052808692,6.66519988978543,13.5567396082238,4.58949733838918,4.80991329478009,3.30821638325442,4.51273570726275,5.60762366814972,12.5943141173404,7.46252495512901,10.3432995861895,3.41174371041569,8.57031953269465,23.8978966393223,25.5127075755976,12.7830323341899,2.80047496423926,10.3079766368692,2.39488422686657,4.10679961302337,7.13931761954628,4.2316101181679,5.32256570473621,12.9431197091449,9.07182439960581,11.5843369372164,9.52147142329821,0,3.30051899293739,6.51033885305182,6.65756774185513,5.43439242695771,8.33478079988406|short_description=p1@WHSC1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12766 | |||
|TSSclassifier=S | |||
|UniProt=O96028,Q05CW4 | |||
|association_with_transcript=0bp_to_ENST00000508803,NM_001042424,uc003gdx.2,uc003gdy.1,uc003gdz.3,uc010icd.1_5end | |||
|description=CAGE_peak_1_at_WHSC1_5end | |||
|id=chr4:1873100..1873152,+ | |||
|ontology_enrichment_celltype=CL:0000133!1.03e-07!59;CL:0000333!4.01e-07!41 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.02e-07,59;CL:0000333,4.00e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.13e-15!235;DOID:14566!3.70e-14!239;DOID:2531!5.03e-10!51;DOID:0060083!5.03e-10!51;DOID:0050686!1.65e-09!137;DOID:1240!8.99e-08!39;DOID:0050687!1.30e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.70e-15,235;DOID:14566,3.83e-14,239;DOID:2531,5.00e-10,51;DOID:0060083,5.00e-10,51;DOID:0050686,1.69e-09,137;DOID:1240,8.96e-08,39;DOID:0050687,1.35e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.36e-09!94;UBERON:0001016!1.36e-09!94;UBERON:0003056!1.27e-08!61;UBERON:0003075!4.39e-08!86;UBERON:0007284!4.39e-08!86;UBERON:0002346!4.85e-08!90;UBERON:0005743!1.73e-07!86;UBERON:0000924!1.78e-07!173;UBERON:0006601!1.78e-07!173;UBERON:0001017!1.84e-07!82;UBERON:0004121!2.01e-07!169;UBERON:0000955!6.07e-07!69;UBERON:0006238!6.07e-07!69;UBERON:0000153!8.72e-07!129;UBERON:0007811!8.72e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.59e-10,89;UBERON:0003056,5.53e-09,61;UBERON:0003075,8.28e-09,82;UBERON:0007284,8.28e-09,82;UBERON:0002346,9.76e-09,86;UBERON:0001017,9.59e-08,81;UBERON:0004121,1.98e-07,171;UBERON:0000924,1.98e-07,171;UBERON:0006601,1.98e-07,171;UBERON:0000955,3.06e-07,68;UBERON:0006238,3.06e-07,68;UBERON:0000073,5.22e-07,53;UBERON:0002616,5.22e-07,53;UBERON:0001049,5.24e-07,56;UBERON:0005068,5.24e-07,56;UBERON:0006241,5.24e-07,56;UBERON:0007135,5.24e-07,56;UBERON:0011216,9.35e-07,223 | |||
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| |||
|short_description=p1@WHSC1 | |||
}} |
Revision as of 10:22, 13 September 2013
Short description: | p1@WHSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_WHSC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508803, NM_001042424, uc003gdx.2, uc003gdy.1, uc003gdz.3, uc010icd.1_5end |
EntrezGene: | WHSC1 |
HGNC: | 12766 |
UniProt: | O96028Q05CW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.02e-07 | 59 |
migratory neural crest cell | 4.00e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.59e-10 | 89 |
pre-chordal neural plate | 5.53e-09 | 61 |
neural plate | 8.28e-09 | 82 |
presumptive neural plate | 8.28e-09 | 82 |
neurectoderm | 9.76e-09 | 86 |
central nervous system | 9.59e-08 | 81 |
ectoderm-derived structure | 1.98e-07 | 171 |
ectoderm | 1.98e-07 | 171 |
presumptive ectoderm | 1.98e-07 | 171 |
brain | 3.06e-07 | 68 |
future brain | 3.06e-07 | 68 |
regional part of nervous system | 5.22e-07 | 53 |
regional part of brain | 5.22e-07 | 53 |
neural tube | 5.24e-07 | 56 |
neural rod | 5.24e-07 | 56 |
future spinal cord | 5.24e-07 | 56 |
neural keel | 5.24e-07 | 56 |
organ system subdivision | 9.35e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.70e-15 | 235 |
disease of cellular proliferation | 3.83e-14 | 239 |
hematologic cancer | 5.00e-10 | 51 |
immune system cancer | 5.00e-10 | 51 |
organ system cancer | 1.69e-09 | 137 |
leukemia | 8.96e-08 | 39 |
cell type cancer | 1.35e-07 | 143 |
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