FFCP PHASE1:Hg19::chr5:110409111..110409126,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=85480|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30743|TSSclassifier=S|UniProt=Q96AU7|association_with_transcript=85bp_to_uc010jbt.1_5end|coexpression_cluster_id=C1948|description=CAGE_peak_2_at_TSLP_5end|id=chr5:110409111..110409126,+|ontology_enrichment_celltype=CL:0000680!9.16e-14!57;CL:0000056!9.16e-14!57;CL:0000355!9.16e-14!57;CL:0000393!7.32e-13!60;CL:0000211!7.32e-13!60;CL:0000187!1.72e-12!54;CL:0000183!9.51e-12!59;CL:0000192!2.50e-11!42;CL:0000514!2.50e-11!42;CL:0000359!8.86e-10!32;CL:0000055!4.66e-09!180|ontology_enrichment_celltype_v019=CL:0000359;3.62e-13;32!CL:0000192;1.26e-10;43!CL:0000393;5.33e-08;61!CL:0000211;5.33e-08;61!CL:0000187;4.49e-07;55|ontology_enrichment_celltype_v019_2=CL:0000680,6.38e-17,58;CL:0000056,6.38e-17,58;CL:0000355,6.38e-17,58;CL:0000187,6.35e-15,55;CL:0000393,2.23e-14,61;CL:0000211,2.23e-14,61;CL:0000192,2.83e-14,43;CL:0000514,2.83e-14,43;CL:0000359,6.06e-14,32|ontology_enrichment_development_v019=CL:0000514;1.26e-10;43!CL:0000355;3.72e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002385!1.07e-14!63;UBERON:0001015!1.07e-14!63;UBERON:0000383!1.07e-14!63;UBERON:0001134!3.80e-14!61;UBERON:0002036!3.80e-14!61;UBERON:0003082!3.80e-14!61;UBERON:0004290!1.54e-13!70;UBERON:0000914!3.22e-13!83;UBERON:0002329!3.22e-13!83;UBERON:0003077!3.22e-13!83;UBERON:0003059!3.22e-13!83;UBERON:0007282!3.22e-13!83;UBERON:0009618!3.22e-13!83;UBERON:0007285!3.22e-13!83;UBERON:0000486!3.57e-11!82;UBERON:0001637!2.30e-08!42;UBERON:0003509!2.30e-08!42;UBERON:0004572!2.30e-08!42;UBERON:0005256!8.05e-08!143;UBERON:0000481!1.25e-07!347;UBERON:0000923!1.78e-07!604;UBERON:0005291!1.78e-07!604;UBERON:0006598!1.78e-07!604;UBERON:0002532!1.78e-07!604;UBERON:0002100!2.10e-07!216;UBERON:0000922!2.49e-07!612;UBERON:0002050!2.51e-07!605;UBERON:0005423!2.51e-07!605;UBERON:0004573!8.98e-07!33;UBERON:0004571!8.98e-07!33|ontology_enrichment_uberon_v019=UBERON:0004573;1.31e-10;33!UBERON:0004571;1.31e-10;33!UBERON:0001637;5.48e-08;42!UBERON:0003509;5.48e-08;42!UBERON:0004572;5.48e-08;42!UBERON:0002385;2.12e-07;31!UBERON:0001015;2.12e-07;31!UBERON:0000383;2.12e-07;31!UBERON:0007100;3.22e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002385,3.68e-18,64;UBERON:0001015,3.68e-18,64;UBERON:0000383,3.68e-18,64;UBERON:0002329,4.51e-18,71;UBERON:0003059,4.51e-18,71;UBERON:0007282,4.51e-18,71;UBERON:0004290,4.51e-18,71;UBERON:0009618,4.51e-18,71;UBERON:0001134,4.85e-18,62;UBERON:0002036,4.85e-18,62;UBERON:0003082,4.85e-18,62;UBERON:0003077,1.25e-17,72;UBERON:0007285,1.25e-17,72;UBERON:0007524,3.36e-17,73;UBERON:0005256,1.86e-16,122;UBERON:0007503,3.87e-16,78;UBERON:0000486,1.61e-14,83;UBERON:0003104,2.40e-13,160;UBERON:0009142,2.40e-13,160;UBERON:0001637,6.75e-13,42;UBERON:0003509,6.75e-13,42;UBERON:0004572,6.75e-13,42;UBERON:0004573,1.14e-11,33;UBERON:0004571,1.14e-11,33;UBERON:0000490,1.29e-11,148;UBERON:0004872,4.34e-10,83;UBERON:0002100,1.80e-09,199;UBERON:0007500,5.14e-09,59;UBERON:0001981,5.14e-09,59;UBERON:0004537,5.14e-09,59;UBERON:0006965,5.14e-09,59;UBERON:0003914,1.46e-08,117;UBERON:0001009,5.89e-08,112;UBERON:0000926,6.80e-08,315;UBERON:0004120,6.80e-08,315;UBERON:0006603,6.80e-08,315;UBERON:0007100,2.52e-07,27;UBERON:0004535,2.59e-07,109;UBERON:0002049,3.21e-07,78;UBERON:0007798,3.21e-07,78;UBERON:0000055,8.82e-07,68|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,2.52687949370732,2.61185628199839,0,1.39560233594486,0,0,1.23766352960047,0.331397375727916,0,2.41077811209591,0,1.46379839637152,0.246242116153576,1.02000345622126,0.626909442956176,0.286235987131057,1.09499540058307,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.30120591877825,3.32778609150109,0.0774672005803016,0,0,0,0.401088894940283,0,0,0.647787332037959,0.77272670290256,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,0,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,0.870627715885752,1.13477044938228,3.11411124497787,0,0,0,1.21079900526674,0.368277635987565,2.53169909952708,0.211255286311942,0.212604299965044,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0.361439152384566,0,1.15877215168659,0,0,0.378139268656271,1.55210578223795,1.05401742831751,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,2.48485975847659,1.13967460498122,4.76673050927588,1.72101972449288,1.77334191099179,0.560677600142307,1.06748995729705,0,0.311211035399766,1.75123873690594,0.8173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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=85480 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30743 | |||
|TSSclassifier=S | |||
|UniProt=Q96AU7 | |||
|association_with_transcript=85bp_to_uc010jbt.1_5end | |||
|coexpression_cluster_id=C1948 | |||
|description=CAGE_peak_2_at_TSLP_5end | |||
|id=chr5:110409111..110409126,+ | |||
|ontology_enrichment_celltype=CL:0000680!9.16e-14!57;CL:0000056!9.16e-14!57;CL:0000355!9.16e-14!57;CL:0000393!7.32e-13!60;CL:0000211!7.32e-13!60;CL:0000187!1.72e-12!54;CL:0000183!9.51e-12!59;CL:0000192!2.50e-11!42;CL:0000514!2.50e-11!42;CL:0000359!8.86e-10!32;CL:0000055!4.66e-09!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.62e-13;32!CL:0000192;1.26e-10;43!CL:0000393;5.33e-08;61!CL:0000211;5.33e-08;61!CL:0000187;4.49e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.38e-17,58;CL:0000056,6.38e-17,58;CL:0000355,6.38e-17,58;CL:0000187,6.35e-15,55;CL:0000393,2.23e-14,61;CL:0000211,2.23e-14,61;CL:0000192,2.83e-14,43;CL:0000514,2.83e-14,43;CL:0000359,6.06e-14,32 | |||
|ontology_enrichment_development_v019=CL:0000514;1.26e-10;43!CL:0000355;3.72e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;1.31e-10;33!UBERON:0004571;1.31e-10;33!UBERON:0001637;5.48e-08;42!UBERON:0003509;5.48e-08;42!UBERON:0004572;5.48e-08;42!UBERON:0002385;2.12e-07;31!UBERON:0001015;2.12e-07;31!UBERON:0000383;2.12e-07;31!UBERON:0007100;3.22e-07;25 | |||
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| |||
|short_description=p2@TSLP | |||
}} |
Revision as of 12:37, 13 September 2013
Short description: | p2@TSLP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TSLP_5end |
Coexpression cluster: | C1948_mesenchymal_Smooth_Skeletal_Lens_Keratocytes_cervical_salivary |
Association with transcript: | 85bp_to_uc010jbt.1_5end |
EntrezGene: | TSLP |
HGNC: | 30743 |
UniProt: | Q96AU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.38e-17 | 58 |
myoblast | 6.38e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.38e-17 | 58 |
muscle cell | 6.35e-15 | 55 |
electrically responsive cell | 2.23e-14 | 61 |
electrically active cell | 2.23e-14 | 61 |
smooth muscle cell | 2.83e-14 | 43 |
smooth muscle myoblast | 2.83e-14 | 43 |
vascular associated smooth muscle cell | 6.06e-14 | 32 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.