FFCP PHASE1:Mm9::chr16:91373031..91373109,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15976|HGNC=|MCL_coexpression_id=1704|UniProt=O35664,Q9D1R7|association_with_transcript=0bp_to_ENSMUST00000117836,ENSMUST00000134491_5end|description=CAGE_peak_1_at_Ifnar2_5end|id=chr16:91373031..91373109,+|ontology_enrichment_celltype=CL:0000219!3.53e-08!54;CL:0002320!5.82e-07!46;CL:0000134!5.82e-07!46|ontology_enrichment_celltype_v019_2=CL:0000219,3.53e-08,54;CL:0002320,5.82e-07,46;CL:0000134,5.82e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.89e-14!70;UBERON:0005256!8.05e-14!47;UBERON:0000926!3.41e-13!193;UBERON:0004120!3.41e-13!193;UBERON:0006603!3.41e-13!193;UBERON:0002365!7.32e-11!25;UBERON:0002330!7.32e-11!25;UBERON:0009569!4.81e-10!66;UBERON:0002204!5.96e-10!32;UBERON:0002107!6.08e-10!22;UBERON:0007499!6.08e-10!22;UBERON:0006925!6.08e-10!22;UBERON:0009497!6.08e-10!22;UBERON:0000015!6.08e-10!22;UBERON:0002423!6.08e-10!22;UBERON:0006235!6.08e-10!22;UBERON:0008835!6.08e-10!22;UBERON:0003894!6.08e-10!22;UBERON:0004161!6.08e-10!22;UBERON:0008836!6.08e-10!22;UBERON:0005172!1.74e-09!49;UBERON:0005173!1.74e-09!49;UBERON:0002417!1.74e-09!49;UBERON:0000916!1.74e-09!49;UBERON:0002100!2.72e-09!98;UBERON:0003914!4.06e-09!47;UBERON:0000466!7.33e-09!79;UBERON:0009854!9.24e-09!23;UBERON:0009856!9.24e-09!23;UBERON:0003104!3.40e-08!131;UBERON:0009142!3.40e-08!131;UBERON:0002371!1.09e-07!16;UBERON:0005057!2.65e-07!51;UBERON:0005177!5.20e-07!85;UBERON:0002384!5.82e-07!46;UBERON:0001474!7.01e-07!22;UBERON:0004765!7.01e-07!22;UBERON:0001434!7.01e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.96e-15,45;UBERON:0002100,1.38e-12,90;UBERON:0003104,4.08e-11,61;UBERON:0009142,4.08e-11,61;UBERON:0002365,7.32e-11,25;UBERON:0002330,7.32e-11,25;UBERON:0009569,4.81e-10,66;UBERON:0002204,5.96e-10,32;UBERON:0002107,6.08e-10,22;UBERON:0007499,6.08e-10,22;UBERON:0006925,6.08e-10,22;UBERON:0009497,6.08e-10,22;UBERON:0000015,6.08e-10,22;UBERON:0002423,6.08e-10,22;UBERON:0006235,6.08e-10,22;UBERON:0008835,6.08e-10,22;UBERON:0003894,6.08e-10,22;UBERON:0004161,6.08e-10,22;UBERON:0008836,6.08e-10,22;UBERON:0005172,1.74e-09,49;UBERON:0005173,1.74e-09,49;UBERON:0002417,1.74e-09,49;UBERON:0000916,1.74e-09,49;UBERON:0005177,1.92e-09,79;UBERON:0003914,4.06e-09,47;UBERON:0009854,9.24e-09,23;UBERON:0009856,9.24e-09,23;UBERON:0000926,4.40e-08,120;UBERON:0004120,4.40e-08,120;UBERON:0006603,4.40e-08,120;UBERON:0002371,1.09e-07,16;UBERON:0002384,5.82e-07,46;UBERON:0001474,7.01e-07,22;UBERON:0004765,7.01e-07,22;UBERON:0001434,7.01e-07,22|phase1_expression=38.5958721522553,65.9563520438392,91.9098463566863,22.6848158480123,30.0537437967808,24.1746151553121,31.7713191209915,70.1139646287759,31.5366737619734,31.5987110534691,16.950578854325,19.1453181588807,57.8658467167475,46.4202336844876,75.6159159321554,89.0891176515234,135.71500435686,64.1965506504014,65.8149281307546,57.2926029927341,44.2225108785563,100.780315468899,99.5171196619344,54.0774389041715,65.8404636662778,66.6109078373423,59.0143934737932,62.2711862462219,9.69119439227507,9.32511480111744,44.5678326417162,30.4814723260623,20.9122027778754,15.8481681015439,10.9763615505484,13.9637102101134,13.271008157054,179.131537955397,187.520482685712,161.24531314393,185.881150217801,176.908780604237,175.269237444246,65.4663453473002,66.199136086343,53.7791983833727,115.011527619162,37.9363772101977,90.7303934693369,102.853416610296,81.472097385961,69.0012308951864,33.2209559994318,61.6557820709643,65.8743846319229,155.127439929676,169.341263003805,165.530741621059,20.4339625468194,16.9277113367051,19.0149421051854,48.1159235538168,70.25428889278,278.069012639952,294.682176044958,291.296847127901,127.330046970322,97.5914495516749,31.0031940802348,35.2365499045713,38.9101178500057,27.1368435183613,33.7928867655969,24.3756690437759,23.6738313415044,31.2534387447407,34.1359231098105,27.9635270406561,27.6491759861238,18.4640802822271,18.0230657896747,13.5437476344758,34.6186918761712,38.8306200921859,38.5051584397561,33.5876587439981,28.4743361598206,22.5543329448614,46.2687041265755,72.1708399019802,113.337015082356,172.084775396277,121.714868733687,150.577190466951,183.88672613769,179.210754838934,92.1315396064292,93.0549561276195,95.3414636892528,97.1683829903436,37.3235062408203,82.1289455451634,142.690934235722,113.770672504533,48.2775021455007,43.0711771307668,39.9364311561679,84.6102548718234,162.871928814071,101.53442312034,38.8607131956144,56.6305789660583,77.9480380725478,71.1410863408378,87.250820694693,111.340599918092,57.1020375466404,191.883346632723,112.345540097634,52.4124593829606,68.460870722722,61.5791571481732,22.3670113461747,37.1831612204665,21.9919042154128,43.4276993854605,94.8935786086889,106.782686116827,108.263833466251,34.0024751448948,34.312545211397,32.1675141408933,35.6339856394167,28.8958466783273,36.362907797923,26.9320496692478,78.3144708008932,84.3479260736431,79.3549461481739,97.224137419551,25.2433659347645,24.3696230699481,26.829257340997,32.250831016843,27.1465631613798,22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| ||
|EntrezGene=15976 | |||
|HGNC= | |||
|MCL_coexpression_id=1704 | |||
|UniProt=O35664,Q9D1R7 | |||
|association_with_transcript=0bp_to_ENSMUST00000117836,ENSMUST00000134491_5end | |||
|description=CAGE_peak_1_at_Ifnar2_5end | |||
|id=chr16:91373031..91373109,+ | |||
|ontology_enrichment_celltype=CL:0000219!3.53e-08!54;CL:0002320!5.82e-07!46;CL:0000134!5.82e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,3.53e-08,54;CL:0002320,5.82e-07,46;CL:0000134,5.82e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.89e-14!70;UBERON:0005256!8.05e-14!47;UBERON:0000926!3.41e-13!193;UBERON:0004120!3.41e-13!193;UBERON:0006603!3.41e-13!193;UBERON:0002365!7.32e-11!25;UBERON:0002330!7.32e-11!25;UBERON:0009569!4.81e-10!66;UBERON:0002204!5.96e-10!32;UBERON:0002107!6.08e-10!22;UBERON:0007499!6.08e-10!22;UBERON:0006925!6.08e-10!22;UBERON:0009497!6.08e-10!22;UBERON:0000015!6.08e-10!22;UBERON:0002423!6.08e-10!22;UBERON:0006235!6.08e-10!22;UBERON:0008835!6.08e-10!22;UBERON:0003894!6.08e-10!22;UBERON:0004161!6.08e-10!22;UBERON:0008836!6.08e-10!22;UBERON:0005172!1.74e-09!49;UBERON:0005173!1.74e-09!49;UBERON:0002417!1.74e-09!49;UBERON:0000916!1.74e-09!49;UBERON:0002100!2.72e-09!98;UBERON:0003914!4.06e-09!47;UBERON:0000466!7.33e-09!79;UBERON:0009854!9.24e-09!23;UBERON:0009856!9.24e-09!23;UBERON:0003104!3.40e-08!131;UBERON:0009142!3.40e-08!131;UBERON:0002371!1.09e-07!16;UBERON:0005057!2.65e-07!51;UBERON:0005177!5.20e-07!85;UBERON:0002384!5.82e-07!46;UBERON:0001474!7.01e-07!22;UBERON:0004765!7.01e-07!22;UBERON:0001434!7.01e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,5.96e-15,45;UBERON:0002100,1.38e-12,90;UBERON:0003104,4.08e-11,61;UBERON:0009142,4.08e-11,61;UBERON:0002365,7.32e-11,25;UBERON:0002330,7.32e-11,25;UBERON:0009569,4.81e-10,66;UBERON:0002204,5.96e-10,32;UBERON:0002107,6.08e-10,22;UBERON:0007499,6.08e-10,22;UBERON:0006925,6.08e-10,22;UBERON:0009497,6.08e-10,22;UBERON:0000015,6.08e-10,22;UBERON:0002423,6.08e-10,22;UBERON:0006235,6.08e-10,22;UBERON:0008835,6.08e-10,22;UBERON:0003894,6.08e-10,22;UBERON:0004161,6.08e-10,22;UBERON:0008836,6.08e-10,22;UBERON:0005172,1.74e-09,49;UBERON:0005173,1.74e-09,49;UBERON:0002417,1.74e-09,49;UBERON:0000916,1.74e-09,49;UBERON:0005177,1.92e-09,79;UBERON:0003914,4.06e-09,47;UBERON:0009854,9.24e-09,23;UBERON:0009856,9.24e-09,23;UBERON:0000926,4.40e-08,120;UBERON:0004120,4.40e-08,120;UBERON:0006603,4.40e-08,120;UBERON:0002371,1.09e-07,16;UBERON:0002384,5.82e-07,46;UBERON:0001474,7.01e-07,22;UBERON:0004765,7.01e-07,22;UBERON:0001434,7.01e-07,22 | |||
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| |||
|short_description=p1@Ifnar2 | |||
}} |
Revision as of 13:17, 13 September 2013
Short description: | p1@Ifnar2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ifnar2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1704 |
Association with transcript: | 0bp_to_ENSMUST00000117836, ENSMUST00000134491_5end |
EntrezGene: | Ifnar2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 3.53e-08 | 54 |
connective tissue cell | 5.82e-07 | 46 |
mesenchymal cell | 5.82e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 5.96e-15 | 45 |
trunk | 1.38e-12 | 90 |
mesenchyme | 4.08e-11 | 61 |
entire embryonic mesenchyme | 4.08e-11 | 61 |
exocrine gland | 7.32e-11 | 25 |
exocrine system | 7.32e-11 | 25 |
subdivision of trunk | 4.81e-10 | 66 |
musculoskeletal system | 5.96e-10 | 32 |
liver | 6.08e-10 | 22 |
epithelial sac | 6.08e-10 | 22 |
digestive gland | 6.08e-10 | 22 |
epithelium of foregut-midgut junction | 6.08e-10 | 22 |
anatomical boundary | 6.08e-10 | 22 |
hepatobiliary system | 6.08e-10 | 22 |
foregut-midgut junction | 6.08e-10 | 22 |
hepatic diverticulum | 6.08e-10 | 22 |
liver primordium | 6.08e-10 | 22 |
septum transversum | 6.08e-10 | 22 |
liver bud | 6.08e-10 | 22 |
abdomen element | 1.74e-09 | 49 |
abdominal segment element | 1.74e-09 | 49 |
abdominal segment of trunk | 1.74e-09 | 49 |
abdomen | 1.74e-09 | 49 |
trunk region element | 1.92e-09 | 79 |
epithelial tube | 4.06e-09 | 47 |
digestive tract diverticulum | 9.24e-09 | 23 |
sac | 9.24e-09 | 23 |
mesoderm | 4.40e-08 | 120 |
mesoderm-derived structure | 4.40e-08 | 120 |
presumptive mesoderm | 4.40e-08 | 120 |
bone marrow | 1.09e-07 | 16 |
connective tissue | 5.82e-07 | 46 |
bone element | 7.01e-07 | 22 |
skeletal element | 7.01e-07 | 22 |
skeletal system | 7.01e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.