FFCP PHASE1:Mm9::chr17:29144870..29144907,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106504|HGNC=|MCL_coexpression_id=2200|UniProt=Q91VJ4,B2KF04|association_with_transcript=0bp_to_ENSMUST00000009138,ENSMUST00000119274,ENSMUST00000126893,NM_134115,uc008bsa.1,uc008bsb.1,uc008bsc.1_5end|description=CAGE_peak_1_at_Stk38_5end|id=chr17:29144870..29144907,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.37e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.09e-07,47|phase1_expression=20.0186058880992,37.3403686174116,35.0349414329943,83.4801223206851,69.1236107325959,39.1158703554703,35.976346651711,101.490932225079,22.385406822115,34.875614421977,20.8885921235116,24.1709641755869,121.381317521225,131.65512604301,23.9839028507277,30.5737653758637,25.8837894907414,60.5687357487816,63.2097538922456,56.8682133409361,29.7651515528744,27.4043025314443,22.9855814442263,41.4380375034923,36.2466664086129,24.1177424928308,25.4149577733854,32.5361561355692,37.4346136329057,44.3573028377478,29.0466968958449,16.5107975099504,19.0670084151217,15.8481681015439,36.3953040886606,38.2339684324532,36.9546534834888,184.153917524239,155.485733560236,182.709786646856,207.645715274948,201.498418062741,184.008423798807,39.2798072083801,37.8135953448789,42.3992997493484,17.9950009200049,16.7879370412944,16.2567775223509,20.8039992009483,26.3174472655682,11.5002051491977,44.6301732113579,132.741271988076,80.3264179950489,55.3107787477286,70.2006927849954,34.0343580903112,21.0409119293982,19.5726662330652,13.3104594736298,19.9918273920788,16.8966011261116,19.7977937801908,24.7216590641744,22.7353636782752,14.9800055259202,14.9845139075406,38.0540877172113,35.776573657898,27.9732198597338,13.7112472513826,16.3442720304194,22.0483438586917,31.3414690229633,33.0918763179608,13.2139057199266,16.343979274904,18.279177457493,25.3221672441972,19.9443063053253,26.045668527838,17.3093459380856,14.069065250792,19.0997809721013,18.2669722993674,18.0812034614861,21.063137378259,24.3081080599521,26.3744744772681,35.073603132903,24.0918685554788,35.358509352803,30.2233787317178,52.6318898132612,57.347441548459,34.4088829322792,36.8129496768605,29.615604524727,30.0338638333789,24.7884418806958,35.931413676009,63.7013099266614,14.2213340630666,29.0097994955027,28.6296647986861,32.3535644809461,38.4799674653232,83.8958743016836,33.3994812895856,34.6970653532272,33.7956680926477,31.1330921295679,32.1039224377086,35.5117895549829,31.1653146497595,55.3716727724997,55.670752414166,54.8458542208922,41.4123135865367,47.2600849505242,41.2143965164939,74.5567044872489,34.5481340473626,33.9303665037797,52.3686963177612,14.0183695671927,7.19883277192089,12.8340929343795,24.4158742229861,27.9075367719362,26.2617595915887,18.0777292999968,19.1786592997748,24.103413168909,20.2801578834697,37.4768858969164,47.3990558024454,20.975988949995,42.9301386008407,27.8457747940186,27.3583504275833,28.0896922496345,39.1832526372859,37.556147531533,33.9501358754852,33.9200242906218,48.3775303281959,30.3950870035308,32.3371397086971,31.1433489770189,29.1530324128675,36.4241896485533,36.9147296513497,44.0373771912999,39.6078190968801,20.3641824320838,11.5806558201622,18.1864639613179,32.1044947430028,30.7229138575236,32.7712951859047,32.9075182463442,41.5172528987022,35.7899701898718,45.8091871158303,39.9727368085433,39.1163896930018,40.6462829286297,41.8627033401693,39.31837262974,36.1113968940571,39.5190207523891,41.7381962344756,17.6643556793867,34.6788543718189,87.8913962736903,45.2210468994661,36.472290841525,34.6032641072053,39.0468407805943,45.1771095156287,43.5860965935946,44.1323452581137,51.2491386468073,40.1865449526587,42.2243150784453,37.2048602716952,43.2820273404447,38.6492345721315,54.4667885684229,55.3612739647141,30.7261999543992,31.7610865055046,32.6852433451933,35.8426337007753,35.8812101260108,32.1222055097659,37.8154492003059,43.6926038019622,46.6286221688883,37.0191491765402,56.3259991465583,32.5347956146383,33.6115881643577,29.4569367224158,38.1377028210385,41.0001171579109,39.4670070261201,42.57902834272,45.5599987237849,34.0456152353221,69.0087391331302,42.7962089818779,51.4862160639025,43.1909881289561,43.5935714858247,36.1832641022525,53.2089187679821,27.4762547067203,36.1782247701297,36.3254483558903,42.2442446919304,43.5516269348721,46.1804663318867,56.5887578787617,52.1772326991492,40.7495028953746,47.9958853659036,55.058073744488,44.725410303267,50.7718195621106,84.4431190059925,106.061608344648,56.0611271241701,38.9070812289673,24.0825884981688,28.248016468721,37.5411024912587,34.0835751725904,26.8181986503818,29.2829058222479,39.2070583873694,35.8453196928828,34.0881971346063,44.7260918646355,37.2425845540903,28.9333299332199,30.8324466798288,27.9549545286972,42.5820255624806,37.2157111664563,36.6495658545546,50.3158875066233,50.4431525691859,27.6769925216679,31.1393263673694,33.0058889572822,30.1207930738388,41.1963098244863,40.0563854410743,32.7180356529755,38.5017168655499,39.82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| ||
|EntrezGene=106504 | |||
|HGNC= | |||
|MCL_coexpression_id=2200 | |||
|UniProt=Q91VJ4,B2KF04 | |||
|association_with_transcript=0bp_to_ENSMUST00000009138,ENSMUST00000119274,ENSMUST00000126893,NM_134115,uc008bsa.1,uc008bsb.1,uc008bsc.1_5end | |||
|description=CAGE_peak_1_at_Stk38_5end | |||
|id=chr17:29144870..29144907,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.37e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.09e-07,47 | |||
|phase1_expression=20.0186058880992,37.3403686174116,35.0349414329943,83.4801223206851,69.1236107325959,39.1158703554703,35.976346651711,101.490932225079,22.385406822115,34.875614421977,20.8885921235116,24.1709641755869,121.381317521225,131.65512604301,23.9839028507277,30.5737653758637,25.8837894907414,60.5687357487816,63.2097538922456,56.8682133409361,29.7651515528744,27.4043025314443,22.9855814442263,41.4380375034923,36.2466664086129,24.1177424928308,25.4149577733854,32.5361561355692,37.4346136329057,44.3573028377478,29.0466968958449,16.5107975099504,19.0670084151217,15.8481681015439,36.3953040886606,38.2339684324532,36.9546534834888,184.153917524239,155.485733560236,182.709786646856,207.645715274948,201.498418062741,184.008423798807,39.2798072083801,37.8135953448789,42.3992997493484,17.9950009200049,16.7879370412944,16.2567775223509,20.8039992009483,26.3174472655682,11.5002051491977,44.6301732113579,132.741271988076,80.3264179950489,55.3107787477286,70.2006927849954,34.0343580903112,21.0409119293982,19.5726662330652,13.3104594736298,19.9918273920788,16.8966011261116,19.7977937801908,24.7216590641744,22.7353636782752,14.9800055259202,14.9845139075406,38.0540877172113,35.776573657898,27.9732198597338,13.7112472513826,16.3442720304194,22.0483438586917,31.3414690229633,33.0918763179608,13.2139057199266,16.343979274904,18.279177457493,25.3221672441972,19.9443063053253,26.045668527838,17.3093459380856,14.069065250792,19.0997809721013,18.2669722993674,18.0812034614861,21.063137378259,24.3081080599521,26.3744744772681,35.073603132903,24.0918685554788,35.358509352803,30.2233787317178,52.6318898132612,57.347441548459,34.4088829322792,36.8129496768605,29.615604524727,30.0338638333789,24.7884418806958,35.931413676009,63.7013099266614,14.2213340630666,29.0097994955027,28.6296647986861,32.3535644809461,38.4799674653232,83.8958743016836,33.3994812895856,34.6970653532272,33.7956680926477,31.1330921295679,32.1039224377086,35.5117895549829,31.1653146497595,55.3716727724997,55.670752414166,54.8458542208922,41.4123135865367,47.2600849505242,41.2143965164939,74.5567044872489,34.5481340473626,33.9303665037797,52.3686963177612,14.0183695671927,7.19883277192089,12.8340929343795,24.4158742229861,27.9075367719362,26.2617595915887,18.0777292999968,19.1786592997748,24.103413168909,20.2801578834697,37.4768858969164,47.3990558024454,20.975988949995,42.9301386008407,27.8457747940186,27.3583504275833,28.0896922496345,39.1832526372859,37.556147531533,33.9501358754852,33.9200242906218,48.3775303281959,30.3950870035308,32.3371397086971,31.1433489770189,29.1530324128675,36.4241896485533,36.9147296513497,44.0373771912999,39.6078190968801,20.3641824320838,11.5806558201622,18.1864639613179,32.1044947430028,30.7229138575236,32.7712951859047,32.9075182463442,41.5172528987022,35.7899701898718,45.8091871158303,39.9727368085433,39.1163896930018,40.6462829286297,41.8627033401693,39.31837262974,36.1113968940571,39.5190207523891,41.7381962344756,17.6643556793867,34.6788543718189,87.8913962736903,45.2210468994661,36.472290841525,34.6032641072053,39.0468407805943,45.1771095156287,43.5860965935946,44.1323452581137,51.2491386468073,40.1865449526587,42.2243150784453,37.2048602716952,43.2820273404447,38.6492345721315,54.4667885684229,55.3612739647141,30.7261999543992,31.7610865055046,32.6852433451933,35.8426337007753,35.8812101260108,32.1222055097659,37.8154492003059,43.6926038019622,46.6286221688883,37.0191491765402,56.3259991465583,32.5347956146383,33.6115881643577,29.4569367224158,38.1377028210385,41.0001171579109,39.4670070261201,42.57902834272,45.5599987237849,34.0456152353221,69.0087391331302,42.7962089818779,51.4862160639025,43.1909881289561,43.5935714858247,36.1832641022525,53.2089187679821,27.4762547067203,36.1782247701297,36.3254483558903,42.2442446919304,43.5516269348721,46.1804663318867,56.5887578787617,52.1772326991492,40.7495028953746,47.9958853659036,55.058073744488,44.725410303267,50.7718195621106,84.4431190059925,106.061608344648,56.0611271241701,38.9070812289673,24.0825884981688,28.248016468721,37.5411024912587,34.0835751725904,26.8181986503818,29.2829058222479,39.2070583873694,35.8453196928828,34.0881971346063,44.7260918646355,37.2425845540903,28.9333299332199,30.8324466798288,27.9549545286972,42.5820255624806,37.2157111664563,36.6495658545546,50.3158875066233,50.4431525691859,27.6769925216679,31.1393263673694,33.0058889572822,30.1207930738388,41.1963098244863,40.0563854410743,32.7180356529755,38.5017168655499,39.8206314999128,43.2216295157495,47.442349894166,34.3844001811326,31.5106914554793,32.2103122619059,35.1512737451811,33.694644392032,43.3436226773031,38.0108237590899,26.4884505729701,33.0887108369832,49.3568725112701,33.2997881062992,62.6567761177624,68.4609169190639,45.5965712456858,40.228479929057,44.9746065301468,45.4710105142567,24.2907145633768,41.3507531530803,33.6410594780053,37.9648781107909,37.2969544869288,41.1449625440286,40.264958484348,15.1280802694531,15.954465564897,13.681797406638,49.6428721367859,31.0009273709513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| |||
|short_description=p1@Stk38 | |||
}} | |||
Revision as of 13:58, 13 September 2013
| Short description: | p1@Stk38 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Stk38_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2200 |
| Association with transcript: | 0bp_to_ENSMUST00000009138, ENSMUST00000119274, ENSMUST00000126893, NM_134115, uc008bsa.1, uc008bsb.1, uc008bsc.1_5end |
| EntrezGene: | Stk38 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 2.09e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
