FFCP PHASE1:Hg19::chr5:149569742..149569784,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6534|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11054|TSSclassifier=S|UniProt=|association_with_transcript=-29bp_to_ENST00000513403_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_SLC6A7_5end|id=chr5:149569742..149569784,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;9.64e-19;3!UBERON:0006601;2.41e-16;82!UBERON:0006222;9.24e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.78e-73!57;UBERON:0005068!5.78e-73!57;UBERON:0006241!5.78e-73!57;UBERON:0007135!5.78e-73!57;UBERON:0002616!9.20e-63!59;UBERON:0001017!2.93e-61!82;UBERON:0000955!4.68e-61!69;UBERON:0006238!4.68e-61!69;UBERON:0005743!6.39e-58!86;UBERON:0002780!1.12e-56!41;UBERON:0001890!1.12e-56!41;UBERON:0006240!1.12e-56!41;UBERON:0001893!5.48e-56!34;UBERON:0002020!7.49e-56!34;UBERON:0003528!7.49e-56!34;UBERON:0001869!1.88e-55!32;UBERON:0003080!3.73e-55!42;UBERON:0002791!2.99e-53!33;UBERON:0000073!2.04e-51!94;UBERON:0001016!2.04e-51!94;UBERON:0003075!4.81e-50!86;UBERON:0007284!4.81e-50!86;UBERON:0007023!9.33e-50!115;UBERON:0002619!3.88e-49!22;UBERON:0002346!2.45e-47!90;UBERON:0001950!6.71e-44!20;UBERON:0000956!8.66e-43!25;UBERON:0000203!8.66e-43!25;UBERON:0003056!1.35e-35!61;UBERON:0000033!1.20e-31!123;UBERON:0000153!1.12e-29!129;UBERON:0007811!1.12e-29!129;UBERON:0004121!9.06e-24!169;UBERON:0000924!5.82e-23!173;UBERON:0006601!5.82e-23!173;UBERON:0000200!9.87e-19!6;UBERON:0003076!4.58e-18!15;UBERON:0003057!4.58e-18!15;UBERON:0000025!3.77e-17!194;UBERON:0002021!9.88e-16!5;UBERON:0004733!7.32e-15!12;UBERON:0002028!7.32e-15!12;UBERON:0007277!7.32e-15!12;UBERON:0000349!7.69e-15!5;UBERON:0002420!2.32e-14!9;UBERON:0007245!2.32e-14!9;UBERON:0010009!2.32e-14!9;UBERON:0010011!2.32e-14!9;UBERON:0000454!2.32e-14!9;UBERON:0002308!3.06e-14!9;UBERON:0000125!3.06e-14!9;UBERON:0004732!1.33e-13!13;UBERON:0001871!1.84e-13!7;UBERON:0002680!9.82e-12!9;UBERON:0001895!9.82e-12!9;UBERON:0010092!9.82e-12!9;UBERON:0004111!1.03e-11!241;UBERON:0001872!2.12e-10!5;UBERON:0000064!2.35e-10!219;UBERON:0000477!3.09e-10!286;UBERON:0002771!3.69e-10!3;UBERON:0009663!1.38e-09!7;UBERON:0000988!4.02e-09!3;UBERON:0002298!9.68e-09!8;UBERON:0000483!1.03e-08!309;UBERON:0000119!1.58e-08!312;UBERON:0000475!6.61e-08!365;UBERON:0001870!2.50e-07!2;UBERON:0000062!5.00e-07!511;UBERON:0001876!6.51e-07!2;UBERON:0001954!6.90e-07!2;UBERON:0003022!6.90e-07!2;UBERON:0002421!6.90e-07!2;UBERON:0002600!6.90e-07!2;UBERON:0002148!9.50e-07!2;UBERON:0009662!9.50e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;1.23e-93;22!UBERON:0001950;1.51e-83;20!UBERON:0000956;2.43e-82;25!UBERON:0000203;2.43e-82;25!UBERON:0001869;2.05e-69;32!UBERON:0003528;6.93e-63;34!UBERON:0002020;6.93e-63;34!UBERON:0002791;3.25e-62;32!UBERON:0001893;7.15e-62;34!UBERON:0002780;9.43e-49;41!UBERON:0001890;9.43e-49;41!UBERON:0000073;2.82e-43;53!UBERON:0002616;2.82e-43;53!UBERON:0000200;2.95e-34;6!UBERON:0000955;1.68e-32;68!UBERON:0001017;6.27e-31;75!UBERON:0002021;2.01e-28;5!UBERON:0000349;8.45e-27;5!UBERON:0001016;6.29e-26;83!UBERON:0001871;6.20e-20;6!UBERON:0001872;9.71e-19;5!UBERON:0001870;8.40e-18;3!UBERON:0007023;2.82e-13;114!UBERON:0002771;1.37e-12;2!UBERON:0002702;1.37e-12;2!UBERON:0004733;9.10e-12;12!UBERON:0002028;9.10e-12;12!UBERON:0001876;1.01e-11;2!UBERON:0001954;1.01e-11;2!UBERON:0003022;1.01e-11;2!UBERON:0002421;1.01e-11;2!UBERON:0002600;1.01e-11;2!UBERON:0011216;1.39e-11;132!UBERON:0004732;7.64e-11;13!UBERON:0002680;1.42e-10;9!UBERON:0001895;1.42e-10;9!UBERON:0002037;1.31e-09;6!UBERON:0010314;3.35e-07;132!UBERON:0002581;3.78e-07;1!UBERON:0002902;3.78e-07;1!UBERON:0009899;3.78e-07;1!UBERON:0007190;3.78e-07;1!UBERON:0002022;6.38e-07;1!UBERON:0003112;6.38e-07;1!UBERON:0011158;6.38e-07;1!UBERON:0003128;6.38e-07;1!UBERON:0001703;6.38e-07;1!UBERON:0002241;6.38e-07;1!UBERON:0001882;7.79e-07;1!UBERON:0005403;7.79e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.74e-93,22;UBERON:0001950,1.93e-83,20;UBERON:0001049,6.63e-83,56;UBERON:0005068,6.63e-83,56;UBERON:0006241,6.63e-83,56;UBERON:0007135,6.63e-83,56;UBERON:0000956,3.30e-82,25;UBERON:0000203,3.30e-82,25;UBERON:0000073,6.84e-82,53;UBERON:0002616,6.84e-82,53;UBERON:0001869,8.40e-78,32;UBERON:0000955,2.69e-76,68;UBERON:0006238,2.69e-76,68;UBERON:0001893,4.33e-73,34;UBERON:0003528,8.51e-73,34;UBERON:0002020,8.51e-73,34;UBERON:0001017,3.78e-72,81;UBERON:0002780,9.01e-72,41;UBERON:0001890,9.01e-72,41;UBERON:0003080,9.01e-72,41;UBERON:0006240,9.01e-72,41;UBERON:0002791,1.46e-70,32;UBERON:0001016,1.66e-64,89;UBERON:0003075,3.92e-55,82;UBERON:0007284,3.92e-55,82;UBERON:0002346,2.48e-52,86;UBERON:0003056,5.36e-47,61;UBERON:0010371,2.31e-42,104;UBERON:0007023,1.16e-41,114;UBERON:0010314,1.05e-34,132;UBERON:0000200,3.51e-34,6;UBERON:0004121,3.10e-31,171;UBERON:0000924,3.10e-31,171;UBERON:0006601,3.10e-31,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6534 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11054 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENST00000513403_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SLC6A7_5end | |||
|id=chr5:149569742..149569784,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.64e-19;3!UBERON:0006601;2.41e-16;82!UBERON:0006222;9.24e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@SLC6A7 | |||
}} |
Revision as of 14:02, 13 September 2013
Short description: | p3@SLC6A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC6A7_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -29bp_to_ENST00000513403_5end |
EntrezGene: | SLC6A7 |
HGNC: | 11054 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.