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FFCP PHASE1:Mm9::chr17:32525943..32525992,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22404|HGNC=|MCL_coexpression_id=22|UniProt=E9PZC6,O88286|association_with_transcript=-48bp_to_ENSMUST00000169280,NM_011717,uc008bwo.2_5end|description=CAGE_peak_4_at_Wiz_5end|id=chr17:32525943..32525992,-|ontology_enrichment_celltype=CL:0000117!2.09e-11!23;CL:0000337!2.09e-11!23;CL:0000540!3.15e-11!33;CL:0000047!3.15e-11!33;CL:0000031!3.15e-11!33;CL:0000404!3.15e-11!33;CL:0000393!4.88e-08!39;CL:0000211!4.88e-08!39;CL:0000221!3.12e-07!44;CL:0000133!3.12e-07!44;CL:0002319!7.65e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-14,23;CL:0000337,1.70e-14,23;CL:0000540,1.28e-12,33;CL:0000047,1.28e-12,33;CL:0000031,1.28e-12,33;CL:0000404,1.28e-12,33;CL:0000393,3.46e-09,39;CL:0000211,3.46e-09,39;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44;CL:0002319,3.76e-08,43;CL:0002609,8.74e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.30e-16!71;UBERON:0003075!9.30e-16!71;UBERON:0007284!9.30e-16!71;UBERON:0001017!1.01e-15!73;UBERON:0005743!1.01e-15!73;UBERON:0003056!2.40e-15!49;UBERON:0000073!8.12e-15!75;UBERON:0001016!8.12e-15!75;UBERON:0001049!2.34e-14!52;UBERON:0005068!2.34e-14!52;UBERON:0006241!2.34e-14!52;UBERON:0007135!2.34e-14!52;UBERON:0000033!3.26e-14!63;UBERON:0004121!9.08e-14!102;UBERON:0000924!9.08e-14!102;UBERON:0006601!9.08e-14!102;UBERON:0003080!1.65e-13!40;UBERON:0007811!2.17e-13!86;UBERON:0002780!2.85e-13!39;UBERON:0001890!2.85e-13!39;UBERON:0006240!2.85e-13!39;UBERON:0000153!1.96e-12!94;UBERON:0002020!2.79e-12!34;UBERON:0002616!1.03e-11!49;UBERON:0000955!1.30e-11!50;UBERON:0006238!1.30e-11!50;UBERON:0002791!3.16e-09!29;UBERON:0003528!3.16e-09!29;UBERON:0001893!3.16e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.72e-21,64;UBERON:0003075,2.72e-21,64;UBERON:0007284,2.72e-21,64;UBERON:0000073,1.34e-18,54;UBERON:0010371,1.55e-18,73;UBERON:0003056,2.19e-18,49;UBERON:0001049,3.36e-18,52;UBERON:0005068,3.36e-18,52;UBERON:0006241,3.36e-18,52;UBERON:0007135,3.36e-18,52;UBERON:0001017,4.89e-18,73;UBERON:0001016,4.78e-17,75;UBERON:0003080,8.35e-17,40;UBERON:0002780,1.78e-16,39;UBERON:0001890,1.78e-16,39;UBERON:0006240,1.78e-16,39;UBERON:0004121,3.96e-16,95;UBERON:0000924,3.96e-16,95;UBERON:0006601,3.96e-16,95;UBERON:0002020,2.39e-15,34;UBERON:0002616,9.33e-15,46;UBERON:0000955,3.69e-14,47;UBERON:0006238,3.69e-14,47;UBERON:0010314,1.66e-11,92;UBERON:0003528,3.14e-11,29;UBERON:0002791,3.14e-11,29;UBERON:0001893,3.14e-11,29;UBERON:0000956,1.27e-07,21;UBERON:0001869,1.27e-07,21;UBERON:0000203,1.27e-07,21|phase1_expression=2.08193501236232,0,0,0,0,0,0,0.774739940649458,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0,0,0,0.548457734422955,0.84877930359606,0.935476191661768,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0,0.202753862439029,0.917733760808408,0,0,0.659058548203415,0,0.139986421625363,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,7.28339259094552,5.81890077199236,5.70448263155561,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0,6.11768712620018,5.67024940993101,3.78584930432488,6.56997264128748,3.3130281142742,5.87955836231779,8.05101956553185,9.19218786610021,1.10115880999389,1.27687338085188,0.46081959976873,8.44072241473241,8.41686321142169,5.73004707612436,0.279182999001381,1.12552522006336,1.5279824777681,9.72274332063103,7.68807076315156,8.38797506213853,0.075726193333184,0.226714680320357,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,2.53518155598025,0,0,0,0,0.253359865475099,0,0.22836775943812,0.258937883647172,0.593768556259299,1.38788261412909,0,0.461230994512117,0.452167921657868,0.352766121407114,0.502666365318702,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,1.67557365450764,0,0.239630249011841,0.599902730993408,0,1.49790639404823,2.74500361691176,19.2251158732683,2.08589184230732,1.53429274398198,1.87009240103604,1.46017136760982,2.64782346010822,0.248813941220186,0.252722758433675,0.420883711772948,1.43132487258974,1.60931473103431,1.80062129805349,1.20563854268572,1.90502197623718,1.66547836370305,2.43624483855295,0.776110112217047,0.862271971731369,0.756424320671277,1.93546236580344,1.09597866213787,0.278047249225598,0,0,2.58744546864041,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.710234206755631,0.393528463494808,0.154267112887378,0.465067889500816,0.804820204198858,0.233530684734339,0.658239399653922,0,0,0.292399974850665,0.439100230582101,0.536825675041487,1.05144974282064,2.98423375899925,0,0,1.49301775374664,3.25131340604614,1.15980715189884,0.201683524623343,0.667134131534611,0.951128130562796,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0.199141273254367,1.89667900953082,0.799739588268102,0,1.62921062276251,1.35766741017338,2.31448205638051,1.13825766823663,0.14761014797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|EntrezGene=22404
|HGNC=
|MCL_coexpression_id=22
|UniProt=E9PZC6,O88286
|association_with_transcript=-48bp_to_ENSMUST00000169280,NM_011717,uc008bwo.2_5end
|description=CAGE_peak_4_at_Wiz_5end
|id=chr17:32525943..32525992,-
|ontology_enrichment_celltype=CL:0000117!2.09e-11!23;CL:0000337!2.09e-11!23;CL:0000540!3.15e-11!33;CL:0000047!3.15e-11!33;CL:0000031!3.15e-11!33;CL:0000404!3.15e-11!33;CL:0000393!4.88e-08!39;CL:0000211!4.88e-08!39;CL:0000221!3.12e-07!44;CL:0000133!3.12e-07!44;CL:0002319!7.65e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.70e-14,23;CL:0000337,1.70e-14,23;CL:0000540,1.28e-12,33;CL:0000047,1.28e-12,33;CL:0000031,1.28e-12,33;CL:0000404,1.28e-12,33;CL:0000393,3.46e-09,39;CL:0000211,3.46e-09,39;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44;CL:0002319,3.76e-08,43;CL:0002609,8.74e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.30e-16!71;UBERON:0003075!9.30e-16!71;UBERON:0007284!9.30e-16!71;UBERON:0001017!1.01e-15!73;UBERON:0005743!1.01e-15!73;UBERON:0003056!2.40e-15!49;UBERON:0000073!8.12e-15!75;UBERON:0001016!8.12e-15!75;UBERON:0001049!2.34e-14!52;UBERON:0005068!2.34e-14!52;UBERON:0006241!2.34e-14!52;UBERON:0007135!2.34e-14!52;UBERON:0000033!3.26e-14!63;UBERON:0004121!9.08e-14!102;UBERON:0000924!9.08e-14!102;UBERON:0006601!9.08e-14!102;UBERON:0003080!1.65e-13!40;UBERON:0007811!2.17e-13!86;UBERON:0002780!2.85e-13!39;UBERON:0001890!2.85e-13!39;UBERON:0006240!2.85e-13!39;UBERON:0000153!1.96e-12!94;UBERON:0002020!2.79e-12!34;UBERON:0002616!1.03e-11!49;UBERON:0000955!1.30e-11!50;UBERON:0006238!1.30e-11!50;UBERON:0002791!3.16e-09!29;UBERON:0003528!3.16e-09!29;UBERON:0001893!3.16e-09!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.72e-21,64;UBERON:0003075,2.72e-21,64;UBERON:0007284,2.72e-21,64;UBERON:0000073,1.34e-18,54;UBERON:0010371,1.55e-18,73;UBERON:0003056,2.19e-18,49;UBERON:0001049,3.36e-18,52;UBERON:0005068,3.36e-18,52;UBERON:0006241,3.36e-18,52;UBERON:0007135,3.36e-18,52;UBERON:0001017,4.89e-18,73;UBERON:0001016,4.78e-17,75;UBERON:0003080,8.35e-17,40;UBERON:0002780,1.78e-16,39;UBERON:0001890,1.78e-16,39;UBERON:0006240,1.78e-16,39;UBERON:0004121,3.96e-16,95;UBERON:0000924,3.96e-16,95;UBERON:0006601,3.96e-16,95;UBERON:0002020,2.39e-15,34;UBERON:0002616,9.33e-15,46;UBERON:0000955,3.69e-14,47;UBERON:0006238,3.69e-14,47;UBERON:0010314,1.66e-11,92;UBERON:0003528,3.14e-11,29;UBERON:0002791,3.14e-11,29;UBERON:0001893,3.14e-11,29;UBERON:0000956,1.27e-07,21;UBERON:0001869,1.27e-07,21;UBERON:0000203,1.27e-07,21
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0.774739940649458,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0,0,0,0.548457734422955,0.84877930359606,0.935476191661768,0.198581902401771,0.261199789138935,0,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0.485510353031154,0,0.202753862439029,0.917733760808408,0,0,0.659058548203415,0,0.139986421625363,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0.286533439938757,0,7.28339259094552,5.81890077199236,5.70448263155561,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0,6.11768712620018,5.67024940993101,3.78584930432488,6.56997264128748,3.3130281142742,5.87955836231779,8.05101956553185,9.19218786610021,1.10115880999389,1.27687338085188,0.46081959976873,8.44072241473241,8.41686321142169,5.73004707612436,0.279182999001381,1.12552522006336,1.5279824777681,9.72274332063103,7.68807076315156,8.38797506213853,0.075726193333184,0.226714680320357,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,2.53518155598025,0,0,0,0,0.253359865475099,0,0.22836775943812,0.258937883647172,0.593768556259299,1.38788261412909,0,0.461230994512117,0.452167921657868,0.352766121407114,0.502666365318702,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,1.67557365450764,0,0.239630249011841,0.599902730993408,0,1.49790639404823,2.74500361691176,19.2251158732683,2.08589184230732,1.53429274398198,1.87009240103604,1.46017136760982,2.64782346010822,0.248813941220186,0.252722758433675,0.420883711772948,1.43132487258974,1.60931473103431,1.80062129805349,1.20563854268572,1.90502197623718,1.66547836370305,2.43624483855295,0.776110112217047,0.862271971731369,0.756424320671277,1.93546236580344,1.09597866213787,0.278047249225598,0,0,2.58744546864041,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0.710234206755631,0.393528463494808,0.154267112887378,0.465067889500816,0.804820204198858,0.233530684734339,0.658239399653922,0,0,0.292399974850665,0.439100230582101,0.536825675041487,1.05144974282064,2.98423375899925,0,0,1.49301775374664,3.25131340604614,1.15980715189884,0.201683524623343,0.667134131534611,0.951128130562796,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0,0,0.199141273254367,1.89667900953082,0.799739588268102,0,1.62921062276251,1.35766741017338,2.31448205638051,1.13825766823663,0.147610147979602,0.156998727841375,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,2.44447464663039,0.678980343100753,0.469380496577004,0.837531287209079,0.714130922658041,0.975668239288994,0.157635144106191,0.44292937929755,1.2756381492599,1.14704320301017,0.172684981865896,0.578596234326046,1.50791283939272,0,0,0.275936746304732,1.28440471990234,0.468846746368813,0.655739781506702,0,1.26203287766503,1.56175497718655,1.93881057959519,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,2.33804686329049,0.790575555893047,0.642642632843614,0.425820255624806,1.78065603667255,2.76907830901079,1.31976098378028,0,2.18502572539483,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0,0,0,0.340439605753788,3.06103859853227,3.88076051348264,2.7863814554107,4.78818630834139,3.56737635204141,3.9491764944509,3.04464949114599,0.23467170806371,0,0.220528398054962,0.16488625294148,0.322928853391811,0.482503399425247,0.238744688006273,0.164140899745061,0.291480836629851,0.370850604021019,0,2.88941615148511,0.185194527369712,0,0,0.457556346413045,0.169978429993855,0.139951452323658,0.414599921413271,0,1.73984796469624,2.84647253977588,0.756037385752609,1.46361807210128,1.31017538247707,0.674321731924103,0.578574190077352,1.04702376793612,0,1.24267862617385,0.56369293868419,0.897099276263873,0.992750942742586,1.75006069509643,1.6790777052105,1.35164900392623,1.5256441023948,1.8228613878153,1.25831213310853,0.966336483304024,0,1.58005560314089,0.810900861160657,0.308132871494482,1.03936658382236,1.25318686967237,2.18549490259391,1.32214994471966,1.9199638532695,1.81739609906666,3.73413352609499,2.21817607301049,1.75424185331554,2.11666051608725,2.45441494581295,0.226730383615211,0,0,0,0.965947970160952,0.187682475451182,0.73260649706906,0.214368379079066,0,2.25900737046827,4.60325236507177,0.572895513439397,3.43706364687375,2.05524755931193,0,2.02506750069542,0.900642406448441,1.81256963593682,1.55328093525546,0.830298780673413,0.798049746802062,1.87806966329548,1.21553358534147,0,1.2869045591501,1.33348036680969,0.618105171716683,0.320919209591815,1.51618327058278,0.50695859978048,1.50901073108861,1.40462261204824,1.02440243847791,1.66562859971278,2.85776214769844,1.73826488917283,1.54327376370964,1.64834360321323,1.03039244094078,0.685738504770831,1.4198064492747,0.715308569841963,1.45346416632329,0.752875043322645,0.930760686808441,0.914639864363863,0.263069711437843,1.49384525230448,1.68342681497322,1.77952527186261,1.18205378850676,0.409231043169689,1.08455788830176,1.54325288784913,2.24829520144151,2.57324769289949,0.644613162144895,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p4@Wiz
}}

Revision as of 14:06, 13 September 2013

Short description:p4@Wiz
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Wiz_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -48bp_to_ENSMUST00000169280, NM_011717, uc008bwo.2_5end
EntrezGene:Wiz
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Wiz

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F119.23
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.72e-2164
neural plate2.72e-2164
presumptive neural plate2.72e-2164
regional part of nervous system1.34e-1854
ecto-epithelium1.55e-1873
pre-chordal neural plate2.19e-1849
neural tube3.36e-1852
neural rod3.36e-1852
future spinal cord3.36e-1852
neural keel3.36e-1852
central nervous system4.89e-1873
nervous system4.78e-1775
anterior neural tube8.35e-1740
regional part of forebrain1.78e-1639
forebrain1.78e-1639
future forebrain1.78e-1639
ectoderm-derived structure3.96e-1695
ectoderm3.96e-1695
presumptive ectoderm3.96e-1695
gray matter2.39e-1534
regional part of brain9.33e-1546
brain3.69e-1447
future brain3.69e-1447
structure with developmental contribution from neural crest1.66e-1192
brain grey matter3.14e-1129
regional part of telencephalon3.14e-1129
telencephalon3.14e-1129
cerebral cortex1.27e-0721
cerebral hemisphere1.27e-0721
pallium1.27e-0721







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