FFCP PHASE1:Mm9::chr17:56396225..56396259,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14154|HGNC=|MCL_coexpression_id=35|UniProt=Q9Z2G1|association_with_transcript=9bp_to_ENSMUST00000060253,NM_010192,uc008dbk.2_5end|description=CAGE_peak_1_at_Fem1a_5end|id=chr17:56396225..56396259,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=17.135926640213,24.7772539423946,17.7449703361919,23.2897442706259,31.5564309866199,27.0285627778143,27.099066309081,23.1130748960421,22.5261955442667,23.8745816848433,19.6900663459331,23.5327869036242,23.7969014604376,29.8977776272971,12.9912807108108,14.7806945194573,10.4934281719222,29.0225192129579,27.285772287542,33.5267824920444,18.4543939627821,13.8014422169231,10.7091913546964,17.5991665072747,16.9762867989706,22.9692785646008,16.3689558540448,18.7459972436723,15.2018735565099,17.8941392129551,17.0732493204585,26.6712882853045,57.201025245365,31.6963362030877,17.3310971850765,22.9403810594719,21.8461211200735,17.1597968602132,8.5946887897618,12.0410461113974,15.8822501768374,17.7591826089196,16.5073520030592,12.211991343631,10.44182391561,10.6457116253775,23.4717403304412,22.2385659508055,25.2639110144643,23.5260177879883,17.358316281545,15.8127820801469,23.3217822420254,18.1340535502836,20.1656279485478,7.46052364504246,8.30946975822394,17.532851137433,23.2663929988537,23.2756030879694,23.4517619297286,21.3472055203553,16.0073063300005,18.4479442042687,26.6993917893083,39.7868864369816,32.0572118254693,32.6585559523321,25.0928861786516,30.7813539396255,26.0802952075714,23.9946826899195,23.8538024227743,20.9459266657571,32.0123873200909,22.0612508786405,15.4162233399144,16.343979274904,16.7431121249305,25.190280956467,29.4590212399759,30.7338888628488,16.4717969410815,19.1339287410771,17.2662019987795,23.8649154233671,19.5049202694771,20.1311401491325,16.8112149199669,12.4693074176196,14.7830889237856,29.2544118173671,12.9194553404473,25.3660500069774,16.2444104361917,26.8816132258401,62.2168781183661,10.9075406449957,10.1316541795119,10.9535268098205,18.7321748302985,8.98285341900225,2.54805239706646,7.11066703153331,5.62876706629157,6.58735650235256,5.56076889516262,23.6360631018454,11.1343289968284,21.5241101643996,14.052311468057,13.7009465240464,16.1430848079241,12.2085338847624,14.8161770990988,21.4889871173745,13.3485282576562,30.9442623808611,27.4229271104461,72.7950824763341,69.565078315024,35.8807687320064,16.775258509631,21.6657789788545,18.431310199584,18.9038220854358,11.7418822015802,6.59893004092748,10.6738990741374,18.574039286198,22.8750301409313,31.9162054366676,19.2944995413427,22.2472447877388,21.6099566341943,20.6046404096052,14.155671575194,22.2688477392066,19.459652399393,33.0393713741764,12.6216829673823,11.4951052216736,14.945156773844,15.6733010549144,20.2068402479444,16.9110110776002,21.1765897504987,22.2484898835553,11.8562396113063,11.3463648100692,15.8356011747554,16.001288467213,8.89751197521913,25.4224081561182,12.3469281844766,6.96619933864726,6.31991868581911,11.5806558201622,6.81992398549422,21.9553318887632,13.3679854189225,18.9065164534066,28.17262353464,23.4149435779411,27.7680803197281,30.9270146518042,48.2892122519315,45.7720142079304,52.9882716721407,42.6835406605648,87.9596583572535,90.643992203706,76.6229902365767,92.3340161071358,27.5479832619007,29.0191006909582,14.8688452342709,21.1560453330835,9.38468302355029,9.28946687441754,18.0414445850931,16.7397325437374,14.2321948060717,12.3646656973163,18.9811624617805,15.317002789333,12.8180956488137,12.5342577385925,12.4777015756237,17.9763881730844,12.1037307929829,15.9313018603494,14.7940962743404,11.1963542357534,20.2873924211545,8.96065842519383,10.6673867942194,16.4819176742249,16.5679727265554,16.5323365737154,17.1128613347099,22.2114895059241,24.6055680482334,20.8556382145118,14.3488066432638,17.9889689907883,12.1716072833102,13.7470981058878,14.5136735515409,17.5494643844994,14.9164408633033,11.2570179407113,11.5014565221884,14.8856379067401,17.78614736753,20.4588891137161,23.1422663443267,23.1572890254416,17.736306255994,11.7484675297701,13.6890580211302,12.9006265189143,9.15291968325158,15.0755631697634,21.1858840388552,21.8549685600735,14.029527825451,14.1737401375216,21.3669390001033,17.6972379892997,18.6499780415167,16.2006945611293,24.1266054302836,7.61467957346193,32.9482062922754,23.4546234359023,14.4495530989013,13.9481907044722,11.4754461763673,174.457410698222,12.6203287766503,12.4940398174924,15.7259080344943,17.4447222505363,16.7099005561796,12.1722908239198,14.1683745586213,17.82760733259,15.4162233399144,24.4204200480573,11.4971469018698,12.2865266530406,15.4742611385897,16.0021019283359,35.84118735179,16.2663026223838,11.4882951646605,17.5402724172985,28.644283609435,23.3650712437385,20.4158351602895,14.9048829085777,21.3898427030833,25.5989773928011,39.0048851727495,34.0347292719017,26.8947288545492,11.1637878299412,14.4881725836685,16.5039516974326,17.7340233642274,25.8634785523002,16.4549020602121,35.0134691481789,15.9576761483323,10.1679394014634,19.4064990288366,31.8230468177056,23.2508774442104,22.6776597729866,19.4576920725112,17.2347944732314,18.0718118710507,21.1384844291981,14.5240248678175,16.0981757011314,11.2968661695524,10.1718966782533,14.2161996829866,17.1583629904892,8.32894306969891,5.87796099759364,8.153798454461,20.0480829783174,16.1331356726379,11.7925290933572,14.688726351765,14.0089158329694,14.8486543347401,16.3185859125633,17.2745722465952,24.6050585464988,14.7761069552644,21.1255366449555,12.4012446510522,9.27002585472668,8.60384150376908,8.5558522871381,13.0451421712508,9.12363077650202,9.27122185301456,7.55185432094911,7.23529476537405,9.42178071221424,34.8516307572017,16.4325782726653,13.1771389938607,15.5093545318889,12.6023198288461,14.143108957731,20.0668168329078,19.9524446203148,15.6550898805052,16.2555984416518,16.079636204205,14.6197968448419,17.4449606524157,17.4143433368996,16.1290125010565,102.25540301046,5.77163478772568,9.06109951755704,8.05846158547577,24.7282680361204,17.2667877415087,17.948859178192,20.5793643915903,25.0786052017682,28.2375921308533,36.365693684067,32.0821487526062,28.0120687220211,21.2375581128899,24.1726047164704,20.2506750069542,22.9663813644352,19.938265995305,23.8169743405837,12.350694362517,18.3551441764474,13.4879548545766,25.7693120092392,15.9306003597267,22.7965950478018,31.3367886200277,35.6440649023287,29.2036480728552,32.5979403175299,35.7405812845238,28.1053248665254,26.4069051065068,33.805280469771,31.7043788634985,40.4849637590613,38.9371335174714,39.1605717541321,34.6152156674778,32.8253591899706,29.8296249575311,26.6213709239006,31.4735770730464,28.778590493201,30.2091111133211,28.0074352121449,33.4758190357174,22.0978557607788,35.9880901691534,33.6685362994643,35.8277754735006,37.3331988203386,27.8277109355389,37.3397787258178,27.3927387593221,37.4715866906919,33.4522200076934,39.1065318367903,78.2369278161569,56.2508118754765,53.5614700283174|short_description=p1@Fem1a}} | ||
|EntrezGene=14154 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|UniProt=Q9Z2G1 | |||
|association_with_transcript=9bp_to_ENSMUST00000060253,NM_010192,uc008dbk.2_5end | |||
|description=CAGE_peak_1_at_Fem1a_5end | |||
|id=chr17:56396225..56396259,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=17.135926640213,24.7772539423946,17.7449703361919,23.2897442706259,31.5564309866199,27.0285627778143,27.099066309081,23.1130748960421,22.5261955442667,23.8745816848433,19.6900663459331,23.5327869036242,23.7969014604376,29.8977776272971,12.9912807108108,14.7806945194573,10.4934281719222,29.0225192129579,27.285772287542,33.5267824920444,18.4543939627821,13.8014422169231,10.7091913546964,17.5991665072747,16.9762867989706,22.9692785646008,16.3689558540448,18.7459972436723,15.2018735565099,17.8941392129551,17.0732493204585,26.6712882853045,57.201025245365,31.6963362030877,17.3310971850765,22.9403810594719,21.8461211200735,17.1597968602132,8.5946887897618,12.0410461113974,15.8822501768374,17.7591826089196,16.5073520030592,12.211991343631,10.44182391561,10.6457116253775,23.4717403304412,22.2385659508055,25.2639110144643,23.5260177879883,17.358316281545,15.8127820801469,23.3217822420254,18.1340535502836,20.1656279485478,7.46052364504246,8.30946975822394,17.532851137433,23.2663929988537,23.2756030879694,23.4517619297286,21.3472055203553,16.0073063300005,18.4479442042687,26.6993917893083,39.7868864369816,32.0572118254693,32.6585559523321,25.0928861786516,30.7813539396255,26.0802952075714,23.9946826899195,23.8538024227743,20.9459266657571,32.0123873200909,22.0612508786405,15.4162233399144,16.343979274904,16.7431121249305,25.190280956467,29.4590212399759,30.7338888628488,16.4717969410815,19.1339287410771,17.2662019987795,23.8649154233671,19.5049202694771,20.1311401491325,16.8112149199669,12.4693074176196,14.7830889237856,29.2544118173671,12.9194553404473,25.3660500069774,16.2444104361917,26.8816132258401,62.2168781183661,10.9075406449957,10.1316541795119,10.9535268098205,18.7321748302985,8.98285341900225,2.54805239706646,7.11066703153331,5.62876706629157,6.58735650235256,5.56076889516262,23.6360631018454,11.1343289968284,21.5241101643996,14.052311468057,13.7009465240464,16.1430848079241,12.2085338847624,14.8161770990988,21.4889871173745,13.3485282576562,30.9442623808611,27.4229271104461,72.7950824763341,69.565078315024,35.8807687320064,16.775258509631,21.6657789788545,18.431310199584,18.9038220854358,11.7418822015802,6.59893004092748,10.6738990741374,18.574039286198,22.8750301409313,31.9162054366676,19.2944995413427,22.2472447877388,21.6099566341943,20.6046404096052,14.155671575194,22.2688477392066,19.459652399393,33.0393713741764,12.6216829673823,11.4951052216736,14.945156773844,15.6733010549144,20.2068402479444,16.9110110776002,21.1765897504987,22.2484898835553,11.8562396113063,11.3463648100692,15.8356011747554,16.001288467213,8.89751197521913,25.4224081561182,12.3469281844766,6.96619933864726,6.31991868581911,11.5806558201622,6.81992398549422,21.9553318887632,13.3679854189225,18.9065164534066,28.17262353464,23.4149435779411,27.7680803197281,30.9270146518042,48.2892122519315,45.7720142079304,52.9882716721407,42.6835406605648,87.9596583572535,90.643992203706,76.6229902365767,92.3340161071358,27.5479832619007,29.0191006909582,14.8688452342709,21.1560453330835,9.38468302355029,9.28946687441754,18.0414445850931,16.7397325437374,14.2321948060717,12.3646656973163,18.9811624617805,15.317002789333,12.8180956488137,12.5342577385925,12.4777015756237,17.9763881730844,12.1037307929829,15.9313018603494,14.7940962743404,11.1963542357534,20.2873924211545,8.96065842519383,10.6673867942194,16.4819176742249,16.5679727265554,16.5323365737154,17.1128613347099,22.2114895059241,24.6055680482334,20.8556382145118,14.3488066432638,17.9889689907883,12.1716072833102,13.7470981058878,14.5136735515409,17.5494643844994,14.9164408633033,11.2570179407113,11.5014565221884,14.8856379067401,17.78614736753,20.4588891137161,23.1422663443267,23.1572890254416,17.736306255994,11.7484675297701,13.6890580211302,12.9006265189143,9.15291968325158,15.0755631697634,21.1858840388552,21.8549685600735,14.029527825451,14.1737401375216,21.3669390001033,17.6972379892997,18.6499780415167,16.2006945611293,24.1266054302836,7.61467957346193,32.9482062922754,23.4546234359023,14.4495530989013,13.9481907044722,11.4754461763673,174.457410698222,12.6203287766503,12.4940398174924,15.7259080344943,17.4447222505363,16.7099005561796,12.1722908239198,14.1683745586213,17.82760733259,15.4162233399144,24.4204200480573,11.4971469018698,12.2865266530406,15.4742611385897,16.0021019283359,35.84118735179,16.2663026223838,11.4882951646605,17.5402724172985,28.644283609435,23.3650712437385,20.4158351602895,14.9048829085777,21.3898427030833,25.5989773928011,39.0048851727495,34.0347292719017,26.8947288545492,11.1637878299412,14.4881725836685,16.5039516974326,17.7340233642274,25.8634785523002,16.4549020602121,35.0134691481789,15.9576761483323,10.1679394014634,19.4064990288366,31.8230468177056,23.2508774442104,22.6776597729866,19.4576920725112,17.2347944732314,18.0718118710507,21.1384844291981,14.5240248678175,16.0981757011314,11.2968661695524,10.1718966782533,14.2161996829866,17.1583629904892,8.32894306969891,5.87796099759364,8.153798454461,20.0480829783174,16.1331356726379,11.7925290933572,14.688726351765,14.0089158329694,14.8486543347401,16.3185859125633,17.2745722465952,24.6050585464988,14.7761069552644,21.1255366449555,12.4012446510522,9.27002585472668,8.60384150376908,8.5558522871381,13.0451421712508,9.12363077650202,9.27122185301456,7.55185432094911,7.23529476537405,9.42178071221424,34.8516307572017,16.4325782726653,13.1771389938607,15.5093545318889,12.6023198288461,14.143108957731,20.0668168329078,19.9524446203148,15.6550898805052,16.2555984416518,16.079636204205,14.6197968448419,17.4449606524157,17.4143433368996,16.1290125010565,102.25540301046,5.77163478772568,9.06109951755704,8.05846158547577,24.7282680361204,17.2667877415087,17.948859178192,20.5793643915903,25.0786052017682,28.2375921308533,36.365693684067,32.0821487526062,28.0120687220211,21.2375581128899,24.1726047164704,20.2506750069542,22.9663813644352,19.938265995305,23.8169743405837,12.350694362517,18.3551441764474,13.4879548545766,25.7693120092392,15.9306003597267,22.7965950478018,31.3367886200277,35.6440649023287,29.2036480728552,32.5979403175299,35.7405812845238,28.1053248665254,26.4069051065068,33.805280469771,31.7043788634985,40.4849637590613,38.9371335174714,39.1605717541321,34.6152156674778,32.8253591899706,29.8296249575311,26.6213709239006,31.4735770730464,28.778590493201,30.2091111133211,28.0074352121449,33.4758190357174,22.0978557607788,35.9880901691534,33.6685362994643,35.8277754735006,37.3331988203386,27.8277109355389,37.3397787258178,27.3927387593221,37.4715866906919,33.4522200076934,39.1065318367903,78.2369278161569,56.2508118754765,53.5614700283174 | |||
|short_description=p1@Fem1a | |||
}} | |||
Revision as of 14:58, 13 September 2013
| Short description: | p1@Fem1a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Fem1a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:35 |
| Association with transcript: | 9bp_to_ENSMUST00000060253, NM_010192, uc008dbk.2_5end |
| EntrezGene: | Fem1a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
