FFCP PHASE1:Hg19::chr5:180242576..180242585,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4245|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7044|TSSclassifier=S|UniProt=D6RAK2|association_with_transcript=0bp_to_ENST00000514438_5end|coexpression_cluster_id=C0|description=CAGE_peak_12_at_MGAT1_5end|id=chr5:180242576..180242585,-|ontology_enrichment_celltype=CL:0002194!1.09e-73!63;CL:0000576!1.09e-73!63;CL:0000040!1.09e-73!63;CL:0000559!1.09e-73!63;CL:0002009!1.14e-73!65;CL:0002057!2.36e-68!42;CL:0000557!6.74e-66!71;CL:0000766!2.77e-65!76;CL:0000839!1.61e-64!70;CL:0000860!9.03e-63!45;CL:0000763!3.72e-45!112;CL:0000049!3.72e-45!112;CL:0000738!1.18e-40!140;CL:0002087!5.38e-38!119;CL:0002031!9.87e-33!124;CL:0000037!3.59e-29!172;CL:0000566!3.59e-29!172;CL:0002032!1.29e-26!165;CL:0000837!1.29e-26!165;CL:0000988!1.96e-26!182;CL:0002393!3.54e-14!9;CL:0002397!3.54e-14!9;CL:0000990!2.80e-11!8;CL:0000451!4.69e-11!10;CL:0000840!5.38e-07!5;CL:0001029!5.38e-07!5|ontology_enrichment_celltype_v019=CL:0000860;5.11e-85;33!CL:0002057;5.11e-85;33!CL:0000473;1.58e-84;39!CL:0000234;1.58e-84;39!CL:0000576;2.25e-69;48!CL:0000766;1.99e-48;69!CL:0000763;5.57e-22;100!CL:0002087;2.69e-18;104!CL:0000235;3.52e-18;6!CL:0002393;3.99e-18;6!CL:0002397;3.99e-18;6!CL:0000738;9.34e-18;136!CL:0000990;2.97e-12;8!CL:0002619;8.45e-11;3!CL:0000451;6.64e-10;10!CL:0000988;1.72e-08;177!CL:0000219;3.18e-07;193|ontology_enrichment_celltype_v019_2=CL:0002194,2.01e-128,59;CL:0000576,2.01e-128,59;CL:0000040,2.01e-128,59;CL:0000559,2.01e-128,59;CL:0000473,8.56e-125,48;CL:0000234,8.56e-125,48;CL:0002009,6.69e-124,61;CL:0000839,8.90e-114,66;CL:0000766,2.77e-112,72;CL:0000557,6.25e-112,67;CL:0000860,4.07e-107,42;CL:0002057,4.07e-107,42;CL:0000763,1.32e-80,108;CL:0000049,1.32e-80,108;CL:0000738,2.79e-69,136;CL:0002087,6.81e-69,115;CL:0002031,2.96e-60,120;CL:0000037,8.47e-54,168;CL:0002032,2.67e-52,161;CL:0000837,2.67e-52,161;CL:0000988,1.91e-50,177;CL:0000134,5.54e-19,354;CL:0002320,2.28e-18,361;CL:0000235,3.37e-18,6;CL:0000219,3.31e-16,386;CL:0002393,4.90e-16,9;CL:0002397,4.90e-16,9;CL:0000048,1.46e-13,427;CL:0000723,3.39e-13,433;CL:0000034,1.01e-12,441;CL:0000990,2.74e-12,8;CL:0002619,7.92e-11,3;CL:0000451,6.22e-10,10|ontology_enrichment_development_v019=CL:0002057;9.17e-79;42!CL:0000049;3.32e-24;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.04e-56!80;UBERON:0002390!8.47e-53!102;UBERON:0003061!8.47e-53!102;UBERON:0001474!3.37e-51!86;UBERON:0002193!1.19e-49!112;UBERON:0002405!2.66e-42!115;UBERON:0004765!7.07e-41!101;UBERON:0001434!7.07e-41!101;UBERON:0003081!8.17e-22!216;UBERON:0002204!1.77e-19!167;UBERON:0007023!1.70e-13!115;UBERON:0000062!3.50e-09!511;UBERON:0000926!5.21e-07!448;UBERON:0004120!5.21e-07!448;UBERON:0006603!5.21e-07!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-97,76;UBERON:0001474,1.43e-89,82;UBERON:0002390,6.53e-83,98;UBERON:0003061,6.53e-83,98;UBERON:0004765,1.17e-80,90;UBERON:0002405,1.05e-77,93;UBERON:0002193,3.40e-74,108;UBERON:0001434,1.68e-71,100;UBERON:0002204,2.94e-38,167;UBERON:0003081,5.63e-34,203;UBERON:0000926,1.33e-17,315;UBERON:0004120,1.33e-17,315;UBERON:0006603,1.33e-17,315;UBERON:0002384,1.57e-17,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,2.16742572642506,0,0,0,0,0,0,3.87796785972314,1.20326668482085,1.51907609501096,6.26963327871788,7.77344798445551,6.18181362322048,4.9435401185052,7.55751887377619,4.85168122375632,10.2268776238501,11.1015329765893,13.6270803193846,3.74000110018796,8.96562472851852,7.56743135643473,12.7555901872549,12.9096936716765,9.47985406160392,8.65914761895982,11.1891521523717,12.8092386133698,9.18251677112708,17.6510964891852,14.0654167675789,1.31940520074686,3.59034583718937,2.13112375266347,11.6083695451434,10.2129340444405,10.5879782329248,11.0549412712967,6.25779502104242,9.77349801173025,6.05399502633369,14.7311054395026,11.076183560431,3.80259515361495,4.67729459923096,1.88692780957538,1.23561494261145,0.450530678524519,0.803627933485401,1.42506371870624,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,1.24930726552346,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,3.8945687238562,5.57215159357655,3.72282289452822,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,5.14809383306323,1.63494278517601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7044 | |||
|TSSclassifier=S | |||
|UniProt=D6RAK2 | |||
|association_with_transcript=0bp_to_ENST00000514438_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_MGAT1_5end | |||
|id=chr5:180242576..180242585,- | |||
|ontology_enrichment_celltype=CL:0002194!1.09e-73!63;CL:0000576!1.09e-73!63;CL:0000040!1.09e-73!63;CL:0000559!1.09e-73!63;CL:0002009!1.14e-73!65;CL:0002057!2.36e-68!42;CL:0000557!6.74e-66!71;CL:0000766!2.77e-65!76;CL:0000839!1.61e-64!70;CL:0000860!9.03e-63!45;CL:0000763!3.72e-45!112;CL:0000049!3.72e-45!112;CL:0000738!1.18e-40!140;CL:0002087!5.38e-38!119;CL:0002031!9.87e-33!124;CL:0000037!3.59e-29!172;CL:0000566!3.59e-29!172;CL:0002032!1.29e-26!165;CL:0000837!1.29e-26!165;CL:0000988!1.96e-26!182;CL:0002393!3.54e-14!9;CL:0002397!3.54e-14!9;CL:0000990!2.80e-11!8;CL:0000451!4.69e-11!10;CL:0000840!5.38e-07!5;CL:0001029!5.38e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.11e-85;33!CL:0002057;5.11e-85;33!CL:0000473;1.58e-84;39!CL:0000234;1.58e-84;39!CL:0000576;2.25e-69;48!CL:0000766;1.99e-48;69!CL:0000763;5.57e-22;100!CL:0002087;2.69e-18;104!CL:0000235;3.52e-18;6!CL:0002393;3.99e-18;6!CL:0002397;3.99e-18;6!CL:0000738;9.34e-18;136!CL:0000990;2.97e-12;8!CL:0002619;8.45e-11;3!CL:0000451;6.64e-10;10!CL:0000988;1.72e-08;177!CL:0000219;3.18e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.01e-128,59;CL:0000576,2.01e-128,59;CL:0000040,2.01e-128,59;CL:0000559,2.01e-128,59;CL:0000473,8.56e-125,48;CL:0000234,8.56e-125,48;CL:0002009,6.69e-124,61;CL:0000839,8.90e-114,66;CL:0000766,2.77e-112,72;CL:0000557,6.25e-112,67;CL:0000860,4.07e-107,42;CL:0002057,4.07e-107,42;CL:0000763,1.32e-80,108;CL:0000049,1.32e-80,108;CL:0000738,2.79e-69,136;CL:0002087,6.81e-69,115;CL:0002031,2.96e-60,120;CL:0000037,8.47e-54,168;CL:0002032,2.67e-52,161;CL:0000837,2.67e-52,161;CL:0000988,1.91e-50,177;CL:0000134,5.54e-19,354;CL:0002320,2.28e-18,361;CL:0000235,3.37e-18,6;CL:0000219,3.31e-16,386;CL:0002393,4.90e-16,9;CL:0002397,4.90e-16,9;CL:0000048,1.46e-13,427;CL:0000723,3.39e-13,433;CL:0000034,1.01e-12,441;CL:0000990,2.74e-12,8;CL:0002619,7.92e-11,3;CL:0000451,6.22e-10,10 | |||
|ontology_enrichment_development_v019=CL:0002057;9.17e-79;42!CL:0000049;3.32e-24;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.04e-56!80;UBERON:0002390!8.47e-53!102;UBERON:0003061!8.47e-53!102;UBERON:0001474!3.37e-51!86;UBERON:0002193!1.19e-49!112;UBERON:0002405!2.66e-42!115;UBERON:0004765!7.07e-41!101;UBERON:0001434!7.07e-41!101;UBERON:0003081!8.17e-22!216;UBERON:0002204!1.77e-19!167;UBERON:0007023!1.70e-13!115;UBERON:0000062!3.50e-09!511;UBERON:0000926!5.21e-07!448;UBERON:0004120!5.21e-07!448;UBERON:0006603!5.21e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.80e-97,76;UBERON:0001474,1.43e-89,82;UBERON:0002390,6.53e-83,98;UBERON:0003061,6.53e-83,98;UBERON:0004765,1.17e-80,90;UBERON:0002405,1.05e-77,93;UBERON:0002193,3.40e-74,108;UBERON:0001434,1.68e-71,100;UBERON:0002204,2.94e-38,167;UBERON:0003081,5.63e-34,203;UBERON:0000926,1.33e-17,315;UBERON:0004120,1.33e-17,315;UBERON:0006603,1.33e-17,315;UBERON:0002384,1.57e-17,371 | |||
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|short_description=p12@MGAT1 | |||
}} |
Revision as of 15:16, 13 September 2013
Short description: | p12@MGAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MGAT1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000514438_5end |
EntrezGene: | MGAT1 |
HGNC: | 7044 |
UniProt: | D6RAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.80e-97 | 76 |
bone element | 1.43e-89 | 82 |
hematopoietic system | 6.53e-83 | 98 |
blood island | 6.53e-83 | 98 |
skeletal element | 1.17e-80 | 90 |
immune system | 1.05e-77 | 93 |
hemolymphoid system | 3.40e-74 | 108 |
skeletal system | 1.68e-71 | 100 |
musculoskeletal system | 2.94e-38 | 167 |
lateral plate mesoderm | 5.63e-34 | 203 |
mesoderm | 1.33e-17 | 315 |
mesoderm-derived structure | 1.33e-17 | 315 |
presumptive mesoderm | 1.33e-17 | 315 |
connective tissue | 1.57e-17 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.