FFCP PHASE1:Hg19::chr5:35991458..35991478,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=133688|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26625|TSSclassifier=S|UniProt=B7Z8Q8,A8K444|association_with_transcript=20bp_to_ENST00000503189,uc003jjv.1,uc011coq.1,uc011cor.1_5end|coexpression_cluster_id=C1009|description=CAGE_peak_1_at_UGT3A1_5end|id=chr5:35991458..35991478,-|ontology_enrichment_celltype=CL:0002322!2.64e-08!5|ontology_enrichment_celltype_v019=CL:0000182;3.04e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.04e-07,12|ontology_enrichment_development_v019=UBERON:0003918;1.04e-08;10!UBERON:0007687;1.04e-08;10!UBERON:0003104;2.50e-07;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003296!6.07e-18!4;UBERON:0010133!6.07e-18!4;UBERON:0001894!2.60e-10!7;UBERON:0006222!2.60e-10!7;UBERON:0001905!4.63e-10!2;UBERON:0002757!4.63e-10!2;UBERON:0010134!4.63e-10!2;UBERON:0002784!4.63e-10!2;UBERON:0005408!4.63e-10!2;UBERON:0001899!4.63e-10!2;UBERON:0001630!5.07e-10!2;UBERON:0005090!5.07e-10!2;UBERON:0000007!1.30e-09!2;UBERON:0002368!5.20e-09!35|ontology_enrichment_uberon_v019=UBERON:0002108;2.95e-16;4!UBERON:0000160;8.72e-12;17!UBERON:0002426;1.03e-09;1!UBERON:0003831;1.03e-09;1!UBERON:0003898;1.03e-09;1!UBERON:0004830;1.03e-09;1!UBERON:0003830;1.03e-09;1!UBERON:0005175;1.03e-09;1!UBERON:0001774;1.03e-09;1!UBERON:0001103;1.03e-09;1!UBERON:0005409;3.41e-09;22!UBERON:0002107;9.68e-08;19!UBERON:0006925;9.68e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.03e-16,4;UBERON:0000160,9.24e-12,17;UBERON:0002426,9.82e-10,1;UBERON:0003831,9.82e-10,1;UBERON:0003898,9.82e-10,1;UBERON:0004830,9.82e-10,1;UBERON:0003830,9.82e-10,1;UBERON:0005175,9.82e-10,1;UBERON:0001774,9.82e-10,1;UBERON:0001103,9.82e-10,1;UBERON:0010084,9.82e-10,1;UBERON:0005409,4.26e-08,25;UBERON:0002107,9.68e-08,19;UBERON:0006925,9.68e-08,19;UBERON:0008836,9.68e-08,19;UBERON:0005172,2.15e-07,54;UBERON:0005173,2.15e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4253552385155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.464775771478074,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,19.6565443335525,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,5.564214628977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9896214411693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,6.30154757147647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.964518890790115,0.550157746388935,0,0,0,0,0,24.5085749700506,13.0087378574795,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5949096221713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,10.7140367175657,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,26.5590937198904,0,0,3.47629945811999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0,0,0.647428837187895,0.513314034281235,5.799072156691,0.485710993059139,0.233939463462106,0,0,0,2.6385724018903,0,2.54674721756217,11.5836567067097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93540260773101,0,0,0,0,0,0.633492505057185,0.203977659483963,0,0,0,0,0,0,0,0,1.66645102024618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@UGT3A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=133688 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26625 | |||
|TSSclassifier=S | |||
|UniProt=B7Z8Q8,A8K444 | |||
|association_with_transcript=20bp_to_ENST00000503189,uc003jjv.1,uc011coq.1,uc011cor.1_5end | |||
|coexpression_cluster_id=C1009 | |||
|description=CAGE_peak_1_at_UGT3A1_5end | |||
|id=chr5:35991458..35991478,- | |||
|ontology_enrichment_celltype=CL:0002322!2.64e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.04e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.04e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.04e-08;10!UBERON:0007687;1.04e-08;10!UBERON:0003104;2.50e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!6.07e-18!4;UBERON:0010133!6.07e-18!4;UBERON:0001894!2.60e-10!7;UBERON:0006222!2.60e-10!7;UBERON:0001905!4.63e-10!2;UBERON:0002757!4.63e-10!2;UBERON:0010134!4.63e-10!2;UBERON:0002784!4.63e-10!2;UBERON:0005408!4.63e-10!2;UBERON:0001899!4.63e-10!2;UBERON:0001630!5.07e-10!2;UBERON:0005090!5.07e-10!2;UBERON:0000007!1.30e-09!2;UBERON:0002368!5.20e-09!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.95e-16;4!UBERON:0000160;8.72e-12;17!UBERON:0002426;1.03e-09;1!UBERON:0003831;1.03e-09;1!UBERON:0003898;1.03e-09;1!UBERON:0004830;1.03e-09;1!UBERON:0003830;1.03e-09;1!UBERON:0005175;1.03e-09;1!UBERON:0001774;1.03e-09;1!UBERON:0001103;1.03e-09;1!UBERON:0005409;3.41e-09;22!UBERON:0002107;9.68e-08;19!UBERON:0006925;9.68e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.03e-16,4;UBERON:0000160,9.24e-12,17;UBERON:0002426,9.82e-10,1;UBERON:0003831,9.82e-10,1;UBERON:0003898,9.82e-10,1;UBERON:0004830,9.82e-10,1;UBERON:0003830,9.82e-10,1;UBERON:0005175,9.82e-10,1;UBERON:0001774,9.82e-10,1;UBERON:0001103,9.82e-10,1;UBERON:0010084,9.82e-10,1;UBERON:0005409,4.26e-08,25;UBERON:0002107,9.68e-08,19;UBERON:0006925,9.68e-08,19;UBERON:0008836,9.68e-08,19;UBERON:0005172,2.15e-07,54;UBERON:0005173,2.15e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4253552385155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.464775771478074,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0132552232746,19.6565443335525,9.45263850690247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,5.564214628977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9896214411693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,6.30154757147647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.964518890790115,0.550157746388935,0,0,0,0,0,24.5085749700506,13.0087378574795,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5949096221713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,10.7140367175657,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,26.5590937198904,0,0,3.47629945811999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.894843454382338,0,0,0.647428837187895,0.513314034281235,5.799072156691,0.485710993059139,0.233939463462106,0,0,0,2.6385724018903,0,2.54674721756217,11.5836567067097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93540260773101,0,0,0,0,0,0.633492505057185,0.203977659483963,0,0,0,0,0,0,0,0,1.66645102024618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@UGT3A1 | |||
}} |
Revision as of 15:31, 13 September 2013
Short description: | p1@UGT3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_UGT3A1_5end |
Coexpression cluster: | C1009_kidney_liver_renal_Hepatocyte_small_temporal_pineal |
Association with transcript: | 20bp_to_ENST00000503189, uc003jjv.1, uc011coq.1, uc011cor.1_5end |
EntrezGene: | UGT3A1 |
HGNC: | 26625 |
UniProt: | B7Z8Q8A8K444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.03e-16 | 4 |
intestine | 9.24e-12 | 17 |
chest muscle | 9.82e-10 | 1 |
respiratory system muscle | 9.82e-10 | 1 |
skeletal muscle of trunk | 9.82e-10 | 1 |
respiratory system skeletal muscle | 9.82e-10 | 1 |
thoracic segment muscle | 9.82e-10 | 1 |
chest organ | 9.82e-10 | 1 |
muscle of trunk | 9.82e-10 | 1 |
diaphragm | 9.82e-10 | 1 |
future diaphragm | 9.82e-10 | 1 |
gastrointestinal system | 4.26e-08 | 25 |
liver | 9.68e-08 | 19 |
digestive gland | 9.68e-08 | 19 |
liver bud | 9.68e-08 | 19 |
abdomen element | 2.15e-07 | 54 |
abdominal segment element | 2.15e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.