FFCP PHASE1:Mm9::chr17:93598348..93598373,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11516|HGNC=|MCL_coexpression_id=724|UniProt=Q3UYH8|association_with_transcript=0bp_to_uc008dwi.1_5end|description=CAGE_peak_3_at_Adcyap1_5end|id=chr17:93598348..93598373,+|ontology_enrichment_celltype=CL:0000540!4.55e-14!33;CL:0000047!4.55e-14!33;CL:0000031!4.55e-14!33;CL:0000404!4.55e-14!33;CL:0000117!2.20e-13!23;CL:0000337!2.20e-13!23;CL:0002319!4.40e-11!43;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0000393!1.82e-10!39;CL:0000211!1.82e-10!39;CL:0000055!3.32e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-19,23;CL:0000337,5.58e-19,23;CL:0000540,9.78e-18,33;CL:0000047,9.78e-18,33;CL:0000031,9.78e-18,33;CL:0000404,9.78e-18,33;CL:0002319,1.79e-16,43;CL:0000221,5.49e-16,44;CL:0000133,5.49e-16,44;CL:0000393,2.43e-14,39;CL:0000211,2.43e-14,39;CL:0002321,2.74e-08,70;CL:0002614,2.96e-08,3;CL:0002612,9.04e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.68e-27!75;UBERON:0001016!1.68e-27!75;UBERON:0001017!1.85e-25!73;UBERON:0005743!1.85e-25!73;UBERON:0001049!3.15e-22!52;UBERON:0005068!3.15e-22!52;UBERON:0006241!3.15e-22!52;UBERON:0007135!3.15e-22!52;UBERON:0002020!7.23e-20!34;UBERON:0000955!1.18e-18!50;UBERON:0006238!1.18e-18!50;UBERON:0002346!2.14e-18!71;UBERON:0003075!2.14e-18!71;UBERON:0007284!2.14e-18!71;UBERON:0004121!2.83e-18!102;UBERON:0000924!2.83e-18!102;UBERON:0006601!2.83e-18!102;UBERON:0002616!7.85e-18!49;UBERON:0003080!1.71e-15!40;UBERON:0002791!3.30e-15!29;UBERON:0003528!3.30e-15!29;UBERON:0001893!3.30e-15!29;UBERON:0000033!7.69e-15!63;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0003056!1.28e-13!49;UBERON:0002021!1.15e-09!10;UBERON:0000411!1.15e-09!10;UBERON:0001950!1.15e-09!10;UBERON:0000956!1.42e-09!21;UBERON:0001869!1.42e-09!21;UBERON:0000203!1.42e-09!21;UBERON:0007811!1.09e-08!86;UBERON:0002619!1.31e-07!17;UBERON:0003076!1.62e-07!12;UBERON:0003057!1.62e-07!12;UBERON:0000153!2.56e-07!94;UBERON:0002298!3.06e-07!6;UBERON:0002420!3.55e-07!8;UBERON:0007245!3.55e-07!8;UBERON:0010009!3.55e-07!8;UBERON:0010011!3.55e-07!8;UBERON:0000454!3.55e-07!8;UBERON:0002240!3.96e-07!6;UBERON:0005174!3.96e-07!6;UBERON:0001137!3.96e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.54e-36,75;UBERON:0001017,9.29e-33,73;UBERON:0004121,3.48e-27,95;UBERON:0000924,3.48e-27,95;UBERON:0006601,3.48e-27,95;UBERON:0000073,4.83e-27,54;UBERON:0001049,3.90e-26,52;UBERON:0005068,3.90e-26,52;UBERON:0006241,3.90e-26,52;UBERON:0007135,3.90e-26,52;UBERON:0002020,8.97e-25,34;UBERON:0002346,1.62e-23,64;UBERON:0003075,1.62e-23,64;UBERON:0007284,1.62e-23,64;UBERON:0010371,9.02e-20,73;UBERON:0000955,4.34e-18,47;UBERON:0006238,4.34e-18,47;UBERON:0002616,1.07e-16,46;UBERON:0002021,1.30e-16,10;UBERON:0000411,1.30e-16,10;UBERON:0001950,1.30e-16,10;UBERON:0003528,4.61e-16,29;UBERON:0002791,4.61e-16,29;UBERON:0001893,4.61e-16,29;UBERON:0003080,8.32e-16,40;UBERON:0002780,2.43e-14,39;UBERON:0001890,2.43e-14,39;UBERON:0006240,2.43e-14,39;UBERON:0010314,2.81e-14,92;UBERON:0002240,3.34e-14,6;UBERON:0005174,3.34e-14,6;UBERON:0001137,3.34e-14,6;UBERON:0001948,3.59e-12,5;UBERON:0002315,3.59e-12,5;UBERON:0003056,4.56e-12,49;UBERON:0003076,1.10e-11,12;UBERON:0003057,1.10e-11,12;UBERON:0002619,4.42e-11,17;UBERON:0000956,1.50e-10,21;UBERON:0001869,1.50e-10,21;UBERON:0000203,1.50e-10,21;UBERON:0002950,2.13e-10,4;UBERON:0001891,2.13e-10,4;UBERON:0009616,2.13e-10,4;UBERON:0010286,2.13e-10,4;UBERON:0011216,4.76e-10,194;UBERON:0000025,1.96e-08,114;UBERON:0002038,2.96e-08,3;UBERON:0009663,2.96e-08,3;UBERON:0009661,2.96e-08,3;UBERON:0000125,2.96e-08,3;UBERON:0002308,2.96e-08,3;UBERON:0002257,9.04e-08,3;UBERON:0004111,1.78e-07,122;UBERON:0002420,6.47e-07,8;UBERON:0007245,6.47e-07,8;UBERON:0010009,6.47e-07,8;UBERON:0010011,6.47e-07,8;UBERON:0000454,6.47e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.420649922702764,6.85562362569129,6.62605622854841,0,0.383381884072945,0,0,2.93680877595932,5.06901559745603,0.923204014111357,1.55528994124096,1.04182674111352,4.18774498502071,10.1297269805702,10.6958773443767,8.83885756421003,8.25755748634797,2.05039390407831,13.0249052533077,34.6117745289078,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0.292780797011547,0.628340120440365,0,0,0,0,5.84183493678809,0.915001205637253,0.125654352112864,4.17178368461463,5.11430914660661,5.194701113989,2.10913641988085,0,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,3.98519734413491,0,0,1.26203287766503,0.780877488593277,3.23135096599198,0,0,0,0.404810701674894,0.584511715822624,1.18586333383957,3.85585579706168,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0.658196082408484,0.913394847343798,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0.259229946583586,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,6.21227026878773,2.76195141904306,4.01026859407578,6.8741272937475,0.685082519770642,3.0215755895588,2.70009000092722,2.70192721934532,3.62513927187364,3.10656187051092,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.37456602987953,0.384150914429216,0.402048282689293,0,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0,0.145346416632329,0.470546902076653,0.423073039458382,0.548783918618318,0,0.950628796921032,0,0.118635018124174,0.492522411877817,0,0.619747364743864,0,1.74867404556562,0.467863216890817,0.859484216193193,0.382576664137687,0.661774257358546,0.463735671240843|short_description=p3@Adcyap1}} | ||
|EntrezGene=11516 | |||
|HGNC= | |||
|MCL_coexpression_id=724 | |||
|UniProt=Q3UYH8 | |||
|association_with_transcript=0bp_to_uc008dwi.1_5end | |||
|description=CAGE_peak_3_at_Adcyap1_5end | |||
|id=chr17:93598348..93598373,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.55e-14!33;CL:0000047!4.55e-14!33;CL:0000031!4.55e-14!33;CL:0000404!4.55e-14!33;CL:0000117!2.20e-13!23;CL:0000337!2.20e-13!23;CL:0002319!4.40e-11!43;CL:0000221!1.31e-10!44;CL:0000133!1.31e-10!44;CL:0000393!1.82e-10!39;CL:0000211!1.82e-10!39;CL:0000055!3.32e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-19,23;CL:0000337,5.58e-19,23;CL:0000540,9.78e-18,33;CL:0000047,9.78e-18,33;CL:0000031,9.78e-18,33;CL:0000404,9.78e-18,33;CL:0002319,1.79e-16,43;CL:0000221,5.49e-16,44;CL:0000133,5.49e-16,44;CL:0000393,2.43e-14,39;CL:0000211,2.43e-14,39;CL:0002321,2.74e-08,70;CL:0002614,2.96e-08,3;CL:0002612,9.04e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.68e-27!75;UBERON:0001016!1.68e-27!75;UBERON:0001017!1.85e-25!73;UBERON:0005743!1.85e-25!73;UBERON:0001049!3.15e-22!52;UBERON:0005068!3.15e-22!52;UBERON:0006241!3.15e-22!52;UBERON:0007135!3.15e-22!52;UBERON:0002020!7.23e-20!34;UBERON:0000955!1.18e-18!50;UBERON:0006238!1.18e-18!50;UBERON:0002346!2.14e-18!71;UBERON:0003075!2.14e-18!71;UBERON:0007284!2.14e-18!71;UBERON:0004121!2.83e-18!102;UBERON:0000924!2.83e-18!102;UBERON:0006601!2.83e-18!102;UBERON:0002616!7.85e-18!49;UBERON:0003080!1.71e-15!40;UBERON:0002791!3.30e-15!29;UBERON:0003528!3.30e-15!29;UBERON:0001893!3.30e-15!29;UBERON:0000033!7.69e-15!63;UBERON:0002780!1.25e-14!39;UBERON:0001890!1.25e-14!39;UBERON:0006240!1.25e-14!39;UBERON:0003056!1.28e-13!49;UBERON:0002021!1.15e-09!10;UBERON:0000411!1.15e-09!10;UBERON:0001950!1.15e-09!10;UBERON:0000956!1.42e-09!21;UBERON:0001869!1.42e-09!21;UBERON:0000203!1.42e-09!21;UBERON:0007811!1.09e-08!86;UBERON:0002619!1.31e-07!17;UBERON:0003076!1.62e-07!12;UBERON:0003057!1.62e-07!12;UBERON:0000153!2.56e-07!94;UBERON:0002298!3.06e-07!6;UBERON:0002420!3.55e-07!8;UBERON:0007245!3.55e-07!8;UBERON:0010009!3.55e-07!8;UBERON:0010011!3.55e-07!8;UBERON:0000454!3.55e-07!8;UBERON:0002240!3.96e-07!6;UBERON:0005174!3.96e-07!6;UBERON:0001137!3.96e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.54e-36,75;UBERON:0001017,9.29e-33,73;UBERON:0004121,3.48e-27,95;UBERON:0000924,3.48e-27,95;UBERON:0006601,3.48e-27,95;UBERON:0000073,4.83e-27,54;UBERON:0001049,3.90e-26,52;UBERON:0005068,3.90e-26,52;UBERON:0006241,3.90e-26,52;UBERON:0007135,3.90e-26,52;UBERON:0002020,8.97e-25,34;UBERON:0002346,1.62e-23,64;UBERON:0003075,1.62e-23,64;UBERON:0007284,1.62e-23,64;UBERON:0010371,9.02e-20,73;UBERON:0000955,4.34e-18,47;UBERON:0006238,4.34e-18,47;UBERON:0002616,1.07e-16,46;UBERON:0002021,1.30e-16,10;UBERON:0000411,1.30e-16,10;UBERON:0001950,1.30e-16,10;UBERON:0003528,4.61e-16,29;UBERON:0002791,4.61e-16,29;UBERON:0001893,4.61e-16,29;UBERON:0003080,8.32e-16,40;UBERON:0002780,2.43e-14,39;UBERON:0001890,2.43e-14,39;UBERON:0006240,2.43e-14,39;UBERON:0010314,2.81e-14,92;UBERON:0002240,3.34e-14,6;UBERON:0005174,3.34e-14,6;UBERON:0001137,3.34e-14,6;UBERON:0001948,3.59e-12,5;UBERON:0002315,3.59e-12,5;UBERON:0003056,4.56e-12,49;UBERON:0003076,1.10e-11,12;UBERON:0003057,1.10e-11,12;UBERON:0002619,4.42e-11,17;UBERON:0000956,1.50e-10,21;UBERON:0001869,1.50e-10,21;UBERON:0000203,1.50e-10,21;UBERON:0002950,2.13e-10,4;UBERON:0001891,2.13e-10,4;UBERON:0009616,2.13e-10,4;UBERON:0010286,2.13e-10,4;UBERON:0011216,4.76e-10,194;UBERON:0000025,1.96e-08,114;UBERON:0002038,2.96e-08,3;UBERON:0009663,2.96e-08,3;UBERON:0009661,2.96e-08,3;UBERON:0000125,2.96e-08,3;UBERON:0002308,2.96e-08,3;UBERON:0002257,9.04e-08,3;UBERON:0004111,1.78e-07,122;UBERON:0002420,6.47e-07,8;UBERON:0007245,6.47e-07,8;UBERON:0010009,6.47e-07,8;UBERON:0010011,6.47e-07,8;UBERON:0000454,6.47e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.26766280701236,0,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0.420649922702764,6.85562362569129,6.62605622854841,0,0.383381884072945,0,0,2.93680877595932,5.06901559745603,0.923204014111357,1.55528994124096,1.04182674111352,4.18774498502071,10.1297269805702,10.6958773443767,8.83885756421003,8.25755748634797,2.05039390407831,13.0249052533077,34.6117745289078,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0.292780797011547,0.628340120440365,0,0,0,0,5.84183493678809,0.915001205637253,0.125654352112864,4.17178368461463,5.11430914660661,5.194701113989,2.10913641988085,0,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.29816946959713,3.98519734413491,0,0,1.26203287766503,0.780877488593277,3.23135096599198,0,0,0,0.404810701674894,0.584511715822624,1.18586333383957,3.85585579706168,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0.658196082408484,0.913394847343798,0,0,0.441056796109924,0.16488625294148,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0.259229946583586,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0.214368379079066,0,6.21227026878773,2.76195141904306,4.01026859407578,6.8741272937475,0.685082519770642,3.0215755895588,2.70009000092722,2.70192721934532,3.62513927187364,3.10656187051092,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.37456602987953,0.384150914429216,0.402048282689293,0,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0,0.145346416632329,0.470546902076653,0.423073039458382,0.548783918618318,0,0.950628796921032,0,0.118635018124174,0.492522411877817,0,0.619747364743864,0,1.74867404556562,0.467863216890817,0.859484216193193,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p3@Adcyap1 | |||
}} |
Revision as of 15:39, 13 September 2013
Short description: | p3@Adcyap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Adcyap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:724 |
Association with transcript: | 0bp_to_uc008dwi.1_5end |
EntrezGene: | Adcyap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.58e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-19 | 23 |
neuron | 9.78e-18 | 33 |
neuronal stem cell | 9.78e-18 | 33 |
neuroblast | 9.78e-18 | 33 |
electrically signaling cell | 9.78e-18 | 33 |
neural cell | 1.79e-16 | 43 |
ectodermal cell | 5.49e-16 | 44 |
neurectodermal cell | 5.49e-16 | 44 |
electrically responsive cell | 2.43e-14 | 39 |
electrically active cell | 2.43e-14 | 39 |
embryonic cell | 2.74e-08 | 70 |
neuron of the substantia nigra | 2.96e-08 | 3 |
neuron of the ventral spinal cord | 9.04e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.