FFCP PHASE1:Mm9::chr18:77193634..77193645,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=56|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:77193634..77193645,+|id=chr18:77193634..77193645,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!5.05e-37!24;UBERON:0005156!5.09e-34!26;UBERON:0000990!5.09e-34!26;UBERON:0000473!1.13e-32!14;UBERON:0003135!2.09e-30!15;UBERON:0000991!3.01e-30!18;UBERON:0005564!3.01e-30!18;UBERON:0003101!2.02e-28!16;UBERON:0000079!2.02e-28!16;UBERON:0004176!1.14e-26!17;UBERON:0009196!1.14e-26!17;UBERON:0009117!1.14e-26!17;UBERON:0005631!5.14e-15!3;UBERON:0000478!5.14e-15!3;UBERON:0000158!5.14e-15!3;UBERON:0002323!6.94e-14!37;UBERON:0004458!6.94e-14!37;UBERON:0003886!1.78e-13!38;UBERON:0002553!4.36e-13!39;UBERON:0005795!8.03e-12!4;UBERON:0000995!8.03e-12!4;UBERON:0001987!6.66e-11!2;UBERON:0003124!6.66e-11!2;UBERON:0004340!6.66e-11!2;UBERON:0003975!1.49e-09!5;UBERON:0000464!2.03e-08!57|ontology_enrichment_uberon_v019_2=UBERON:0003133,7.63e-26,24;UBERON:0005156,7.50e-24,26;UBERON:0000990,7.50e-24,26;UBERON:0005795,9.27e-23,4;UBERON:0000995,9.27e-23,4;UBERON:0001987,1.59e-20,2;UBERON:0003124,1.59e-20,2;UBERON:0004340,1.59e-20,2;UBERON:0003975,2.31e-18,5;UBERON:0000473,1.34e-17,14;UBERON:0003135,1.92e-16,15;UBERON:0003101,1.98e-15,16;UBERON:0000079,1.98e-15,16;UBERON:0004176,1.56e-14,17;UBERON:0009196,1.56e-14,17;UBERON:0009117,1.56e-14,17;UBERON:0005631,4.93e-14,3;UBERON:0000478,4.93e-14,3;UBERON:0000158,4.93e-14,3;UBERON:0000991,9.73e-14,18;UBERON:0005564,9.73e-14,18;UBERON:0003134,9.70e-12,8;UBERON:0006834,2.90e-11,1;UBERON:0004175,1.66e-10,9;UBERON:0000474,1.66e-10,9;UBERON:0003100,1.05e-08,11;UBERON:0002323,9.67e-07,37;UBERON:0004458,9.67e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2029288193129,1.48282449604674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25477175473676,0.448549638131936,0,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,3.6457227756306,4.92838918800841,3.62376181239009,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,3.94133198447482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:77193634..77193645,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:77193634..77193645,+ | |||
|id=chr18:77193634..77193645,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!5.05e-37!24;UBERON:0005156!5.09e-34!26;UBERON:0000990!5.09e-34!26;UBERON:0000473!1.13e-32!14;UBERON:0003135!2.09e-30!15;UBERON:0000991!3.01e-30!18;UBERON:0005564!3.01e-30!18;UBERON:0003101!2.02e-28!16;UBERON:0000079!2.02e-28!16;UBERON:0004176!1.14e-26!17;UBERON:0009196!1.14e-26!17;UBERON:0009117!1.14e-26!17;UBERON:0005631!5.14e-15!3;UBERON:0000478!5.14e-15!3;UBERON:0000158!5.14e-15!3;UBERON:0002323!6.94e-14!37;UBERON:0004458!6.94e-14!37;UBERON:0003886!1.78e-13!38;UBERON:0002553!4.36e-13!39;UBERON:0005795!8.03e-12!4;UBERON:0000995!8.03e-12!4;UBERON:0001987!6.66e-11!2;UBERON:0003124!6.66e-11!2;UBERON:0004340!6.66e-11!2;UBERON:0003975!1.49e-09!5;UBERON:0000464!2.03e-08!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,7.63e-26,24;UBERON:0005156,7.50e-24,26;UBERON:0000990,7.50e-24,26;UBERON:0005795,9.27e-23,4;UBERON:0000995,9.27e-23,4;UBERON:0001987,1.59e-20,2;UBERON:0003124,1.59e-20,2;UBERON:0004340,1.59e-20,2;UBERON:0003975,2.31e-18,5;UBERON:0000473,1.34e-17,14;UBERON:0003135,1.92e-16,15;UBERON:0003101,1.98e-15,16;UBERON:0000079,1.98e-15,16;UBERON:0004176,1.56e-14,17;UBERON:0009196,1.56e-14,17;UBERON:0009117,1.56e-14,17;UBERON:0005631,4.93e-14,3;UBERON:0000478,4.93e-14,3;UBERON:0000158,4.93e-14,3;UBERON:0000991,9.73e-14,18;UBERON:0005564,9.73e-14,18;UBERON:0003134,9.70e-12,8;UBERON:0006834,2.90e-11,1;UBERON:0004175,1.66e-10,9;UBERON:0000474,1.66e-10,9;UBERON:0003100,1.05e-08,11;UBERON:0002323,9.67e-07,37;UBERON:0004458,9.67e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2029288193129,1.48282449604674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25477175473676,0.448549638131936,0,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,3.6457227756306,4.92838918800841,3.62376181239009,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,3.94133198447482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:77193634..77193645,+ | |||
}} |
Revision as of 16:46, 13 September 2013
Short description: | p@chr18:77193634..77193645, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:77193634..77193645, + |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 7.63e-26 | 24 |
reproductive structure | 7.50e-24 | 26 |
reproductive system | 7.50e-24 | 26 |
embryonic uterus | 9.27e-23 | 4 |
uterus | 9.27e-23 | 4 |
placenta | 1.59e-20 | 2 |
chorion | 1.59e-20 | 2 |
allantois | 1.59e-20 | 2 |
internal female genitalia | 2.31e-18 | 5 |
testis | 1.34e-17 | 14 |
male reproductive organ | 1.92e-16 | 15 |
male organism | 1.98e-15 | 16 |
male reproductive system | 1.98e-15 | 16 |
external genitalia | 1.56e-14 | 17 |
indifferent external genitalia | 1.56e-14 | 17 |
indifferent gonad | 1.56e-14 | 17 |
extraembryonic membrane | 4.93e-14 | 3 |
extraembryonic structure | 4.93e-14 | 3 |
membranous layer | 4.93e-14 | 3 |
gonad | 9.73e-14 | 18 |
gonad primordium | 9.73e-14 | 18 |
female reproductive organ | 9.70e-12 | 8 |
uterus or analog | 2.90e-11 | 1 |
internal genitalia | 1.66e-10 | 9 |
female reproductive system | 1.66e-10 | 9 |
female organism | 1.05e-08 | 11 |
body cavity | 9.67e-07 | 37 |
body cavity or lining | 9.67e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.