FFCP PHASE1:Hg19::chr6:101846679..101846702,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2898|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4580|TSSclassifier=S|UniProt=G3XAD3|association_with_transcript=10bp_to_ENST00000358361_5end|coexpression_cluster_id=C118|description=CAGE_peak_1_at_GRIK2_5end|id=chr6:101846679..101846702,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002579;5.32e-08;3|ontology_enrichment_celltype_v019_2=CL:0002579,5.05e-08,3|ontology_enrichment_development_v019=UBERON:0006601;8.74e-22;82!UBERON:0006215;3.84e-10;3!UBERON:0006241;2.86e-08;3!UBERON:0003057;2.86e-08;3!UBERON:0010122;2.95e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.71e-71!82;UBERON:0005743!4.49e-69!86;UBERON:0000073!5.24e-65!94;UBERON:0001016!5.24e-65!94;UBERON:0001049!1.16e-62!57;UBERON:0005068!1.16e-62!57;UBERON:0006241!1.16e-62!57;UBERON:0007135!1.16e-62!57;UBERON:0000955!3.56e-59!69;UBERON:0006238!3.56e-59!69;UBERON:0002616!4.81e-57!59;UBERON:0003075!2.41e-53!86;UBERON:0007284!2.41e-53!86;UBERON:0002346!4.31e-50!90;UBERON:0002780!1.78e-48!41;UBERON:0001890!1.78e-48!41;UBERON:0006240!1.78e-48!41;UBERON:0003080!5.02e-47!42;UBERON:0002020!1.49e-44!34;UBERON:0003528!1.49e-44!34;UBERON:0001893!1.81e-44!34;UBERON:0002791!5.75e-43!33;UBERON:0001869!5.19e-42!32;UBERON:0003056!4.83e-37!61;UBERON:0004121!1.67e-36!169;UBERON:0000924!4.02e-35!173;UBERON:0006601!4.02e-35!173;UBERON:0000033!5.39e-34!123;UBERON:0002619!2.33e-33!22;UBERON:0000153!1.64e-31!129;UBERON:0007811!1.64e-31!129;UBERON:0000956!3.13e-31!25;UBERON:0000203!3.13e-31!25;UBERON:0001950!2.54e-30!20;UBERON:0007023!3.96e-30!115;UBERON:0000025!8.82e-22!194;UBERON:0003076!4.36e-16!15;UBERON:0003057!4.36e-16!15;UBERON:0002420!3.81e-15!9;UBERON:0007245!3.81e-15!9;UBERON:0010009!3.81e-15!9;UBERON:0010011!3.81e-15!9;UBERON:0000454!3.81e-15!9;UBERON:0004111!8.27e-15!241;UBERON:0002308!1.07e-14!9;UBERON:0000125!1.07e-14!9;UBERON:0000483!5.37e-14!309;UBERON:0000119!1.20e-13!312;UBERON:0000475!2.36e-13!365;UBERON:0000477!3.06e-13!286;UBERON:0000064!7.79e-13!219;UBERON:0004733!2.63e-12!12;UBERON:0002028!2.63e-12!12;UBERON:0007277!2.63e-12!12;UBERON:0009663!6.19e-12!7;UBERON:0004732!3.73e-11!13;UBERON:0000200!8.93e-11!6;UBERON:0001871!1.04e-10!7;UBERON:0000349!1.83e-09!5;UBERON:0002298!3.13e-09!8;UBERON:0002021!3.79e-09!5;UBERON:0001872!3.85e-09!5;UBERON:0000062!6.52e-09!511;UBERON:0002680!1.34e-08!9;UBERON:0001895!1.34e-08!9;UBERON:0010092!1.34e-08!9;UBERON:0000467!2.73e-08!625;UBERON:0000480!3.16e-08!626;UBERON:0000369!3.69e-08!4;UBERON:0002435!3.69e-08!4;UBERON:0000204!3.69e-08!4;UBERON:0010082!3.69e-08!4;UBERON:0000468!4.45e-08!659;UBERON:0000923!8.55e-08!604;UBERON:0005291!8.55e-08!604;UBERON:0006598!8.55e-08!604;UBERON:0002532!8.55e-08!604;UBERON:0000922!8.99e-08!612;UBERON:0002050!9.85e-08!605;UBERON:0005423!9.85e-08!605;UBERON:0000481!1.79e-07!347|ontology_enrichment_uberon_v019=UBERON:0001869;2.22e-64;32!UBERON:0001893;5.03e-62;34!UBERON:0003528;9.19e-62;34!UBERON:0002020;9.19e-62;34!UBERON:0002791;1.55e-60;32!UBERON:0002780;1.19e-56;41!UBERON:0001890;1.19e-56;41!UBERON:0002619;3.30e-56;22!UBERON:0000073;2.31e-54;53!UBERON:0002616;2.31e-54;53!UBERON:0000956;2.83e-53;25!UBERON:0000203;2.83e-53;25!UBERON:0001950;5.35e-51;20!UBERON:0001017;4.00e-42;75!UBERON:0000955;3.59e-39;68!UBERON:0001016;8.58e-34;83!UBERON:0002420;3.72e-20;9!UBERON:0007245;3.72e-20;9!UBERON:0010009;3.72e-20;9!UBERON:0010011;3.72e-20;9!UBERON:0000454;3.72e-20;9!UBERON:0000125;1.79e-19;9!UBERON:0002308;1.79e-19;9!UBERON:0004733;2.53e-17;12!UBERON:0002028;2.53e-17;12!UBERON:0000200;3.48e-17;6!UBERON:0004732;7.58e-16;13!UBERON:0002298;2.36e-15;6!UBERON:0000349;5.12e-15;5!UBERON:0001871;7.01e-15;6!UBERON:0009663;8.58e-15;7!UBERON:0001872;1.78e-14;5!UBERON:0002021;2.05e-14;5!UBERON:0007023;7.18e-14;114!UBERON:0011216;7.03e-13;132!UBERON:0000369;8.39e-13;4!UBERON:0002435;8.39e-13;4!UBERON:0000204;8.39e-13;4!UBERON:0002680;3.44e-11;9!UBERON:0001895;3.44e-11;9!UBERON:0005383;4.44e-10;3!UBERON:0005382;4.44e-10;3!UBERON:0001870;1.38e-09;3!UBERON:0001894;1.72e-09;7!UBERON:0000988;8.70e-09;3!UBERON:0002240;2.86e-08;3!UBERON:0005174;2.86e-08;3!UBERON:0001137;2.86e-08;3!UBERON:0001896;2.94e-08;3!UBERON:0005290;2.94e-08;3!UBERON:0010314;1.05e-07;132!UBERON:0001873;2.95e-07;2!UBERON:0001876;3.52e-07;2!UBERON:0002771;5.60e-07;2!UBERON:0003688;6.26e-07;6!UBERON:0002358;6.26e-07;6!UBERON:0003684;6.26e-07;6!UBERON:0001178;6.26e-07;6!UBERON:0002702;6.46e-07;2!UBERON:0001954;8.84e-07;2!UBERON:0003022;8.84e-07;2!UBERON:0002421;8.84e-07;2!UBERON:0002600;8.84e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.13e-103,56;UBERON:0005068,4.13e-103,56;UBERON:0006241,4.13e-103,56;UBERON:0007135,4.13e-103,56;UBERON:0001017,9.88e-97,81;UBERON:0000073,4.73e-96,53;UBERON:0002616,4.73e-96,53;UBERON:0001016,1.56e-92,89;UBERON:0000955,2.63e-89,68;UBERON:0006238,2.63e-89,68;UBERON:0002780,2.65e-79,41;UBERON:0001890,2.65e-79,41;UB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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2898 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4580 | |||
|TSSclassifier=S | |||
|UniProt=G3XAD3 | |||
|association_with_transcript=10bp_to_ENST00000358361_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_1_at_GRIK2_5end | |||
|id=chr6:101846679..101846702,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;5.32e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,5.05e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.74e-22;82!UBERON:0006215;3.84e-10;3!UBERON:0006241;2.86e-08;3!UBERON:0003057;2.86e-08;3!UBERON:0010122;2.95e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@GRIK2 | |||
}} |
Revision as of 17:06, 13 September 2013
Short description: | p1@GRIK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GRIK2_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 10bp_to_ENST00000358361_5end |
EntrezGene: | GRIK2 |
HGNC: | 4580 |
UniProt: | G3XAD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 5.05e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.