FFCP PHASE1:Hg19::chr6:109775447..109775474,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64780|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=20619|TSSclassifier=W|UniProt=|association_with_transcript=178bp_to_uc003ptj.2_5end|description=CAGE_peak_4_at_MICAL1_5end|id=chr6:109775447..109775474,-|ontology_enrichment_celltype=CL:0000055!2.43e-12!180;CL:0000057!1.48e-10!75;CL:0002620!2.76e-07!23|ontology_enrichment_celltype_v019=CL:0002620;6.97e-11;23!CL:0000188;7.60e-10;9!CL:0000680;1.93e-07;7!CL:0000057;8.38e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,1.62e-12,76;CL:0002620,5.71e-11,23;CL:0000188,1.79e-09,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;4.83e-08;5!DOID:450;4.83e-08;5!DOID:66;4.83e-08;5!DOID:423;4.83e-08;5!DOID:0080000;4.83e-08;5!DOID:11722;4.83e-08;5|ontology_enrichment_disease_v019_2=DOID:17,2.63e-08,5;DOID:450,2.63e-08,5;DOID:66,2.63e-08,5;DOID:423,2.63e-08,5;DOID:0080000,2.63e-08,5;DOID:11722,2.63e-08,5|ontology_enrichment_uberon=UBERON:0003102!2.78e-10!95;UBERON:0002097!3.47e-09!40;UBERON:0002199!1.15e-08!45;UBERON:0002416!1.15e-08!45;UBERON:0000914!1.03e-07!83;UBERON:0002329!1.03e-07!83;UBERON:0003077!1.03e-07!83;UBERON:0003059!1.03e-07!83;UBERON:0007282!1.03e-07!83;UBERON:0009618!1.03e-07!83;UBERON:0007285!1.03e-07!83;UBERON:0005256!7.26e-07!143|ontology_enrichment_uberon_v019=UBERON:0001134;5.09e-12;16!UBERON:0002036;5.09e-12;16!UBERON:0002097;3.74e-10;41!UBERON:0002199;7.15e-08;46!UBERON:0002416;7.15e-08;46!UBERON:0005904;3.73e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.19e-12,41;UBERON:0002199,2.41e-11,46;UBERON:0002416,2.41e-11,46;UBERON:0003102,4.13e-10,99;UBERON:0005904,3.22e-07,4|phase1_expression=0.363356758541113,1.92690471501885,0.845726424575827,2.00146596706261,3.5756887554183,0.872338524100369,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.495065411840187,0,0,0,0,0,0.246242116153576,0,1.25381888591235,0,0.136874425072884,0.87879847716362,0,0.164201178899891,0.550975469195755,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0.200544447470142,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0,0.632924774881769,0,0.212604299965044,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0,0.393010762749165,0.411202997999018,0.501559486172034,0,0,0,0.111410456885174,0,0,0.541607727530031,0,0.390178042679635,0.164437904603676,0.276350017785848,0.579606171470105,0.296573126324121,0,0,0.453237370790265,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,4.87613732627923,0,0.383587685530591,1.0843174571537,3.00802746381534,0.579386075843295,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,2.61958150995425,0.364295288292542,0,0.324547393654683,0.522389211897802,0.398873881556595,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,1.2663051166458,0.132409180813219,0.286836620748814,0,2.80338800071154,3.20246987189115,1.72667283892012,0,0.134710672069688,0,1.81628913173918,1.72852777344,0.234321431833797,0,0.570471821544449,0.448346041655403,0.117434498643765,0.323745888736263,0.280901613404497,0,0.368502951935304,0.413303124703062,0,2.47266929278557,3.64064544775211,4.31170885089743,0.505008341862199,0.250237039743928,0.277064115484183,4.82875382968922,2.75839016219118,3.30523729594513,0.340296549480063,4.84352016359927,6.40672166455702,2.54318281391474,1.80054657650641,1.64884046781502,8.24449728146013,5.95573940261087,2.02531598689519,1.36411807225678,5.80597680761463,6.44349290496095,0.484938170456436,4.9701342952326,1.30977727695932,2.54340888465731,0,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0,0.829288440122964,0.252320850875628,0,1.56449532329816,3.85944562915731,2.76269842704961,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0.766765358330422,0,0,0,0,0.12624243342638,0.825472625798197,0.763976851116555,2.34434894420094,0,0.102827492703324,0.600686115687835,2.28661146104463,0.224262168690721,0.87192013766656,0.1466765716419,0,28.6125156681506,0,2.92531928243358,2.08014873822732,1.28603687131071,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,2.39624855491583,17.2292903751171,0,2.02693829334611,2.26023954805422,5.01370697071708,0.336255431980582,0.197030760201927,0,0.385029108839245,0.76228387266739,0,0,0.167516265334349,1.27587750330633,0,2.99161459204025,0.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20619 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=178bp_to_uc003ptj.2_5end | |||
|description=CAGE_peak_4_at_MICAL1_5end | |||
|id=chr6:109775447..109775474,- | |||
|ontology_enrichment_celltype=CL:0000055!2.43e-12!180;CL:0000057!1.48e-10!75;CL:0002620!2.76e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.97e-11;23!CL:0000188;7.60e-10;9!CL:0000680;1.93e-07;7!CL:0000057;8.38e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.62e-12,76;CL:0002620,5.71e-11,23;CL:0000188,1.79e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.83e-08;5!DOID:450;4.83e-08;5!DOID:66;4.83e-08;5!DOID:423;4.83e-08;5!DOID:0080000;4.83e-08;5!DOID:11722;4.83e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.63e-08,5;DOID:450,2.63e-08,5;DOID:66,2.63e-08,5;DOID:423,2.63e-08,5;DOID:0080000,2.63e-08,5;DOID:11722,2.63e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.78e-10!95;UBERON:0002097!3.47e-09!40;UBERON:0002199!1.15e-08!45;UBERON:0002416!1.15e-08!45;UBERON:0000914!1.03e-07!83;UBERON:0002329!1.03e-07!83;UBERON:0003077!1.03e-07!83;UBERON:0003059!1.03e-07!83;UBERON:0007282!1.03e-07!83;UBERON:0009618!1.03e-07!83;UBERON:0007285!1.03e-07!83;UBERON:0005256!7.26e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;5.09e-12;16!UBERON:0002036;5.09e-12;16!UBERON:0002097;3.74e-10;41!UBERON:0002199;7.15e-08;46!UBERON:0002416;7.15e-08;46!UBERON:0005904;3.73e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.19e-12,41;UBERON:0002199,2.41e-11,46;UBERON:0002416,2.41e-11,46;UBERON:0003102,4.13e-10,99;UBERON:0005904,3.22e-07,4 | |||
|phase1_expression=0.363356758541113,1.92690471501885,0.845726424575827,2.00146596706261,3.5756887554183,0.872338524100369,2.53299878168311,0,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.495065411840187,0,0,0,0,0,0.246242116153576,0,1.25381888591235,0,0.136874425072884,0.87879847716362,0,0.164201178899891,0.550975469195755,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0.200544447470142,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0,0.632924774881769,0,0.212604299965044,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.526768169550154,0,0.393010762749165,0.411202997999018,0.501559486172034,0,0,0,0.111410456885174,0,0,0.541607727530031,0,0.390178042679635,0.164437904603676,0.276350017785848,0.579606171470105,0.296573126324121,0,0,0.453237370790265,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,4.87613732627923,0,0.383587685530591,1.0843174571537,3.00802746381534,0.579386075843295,0,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,2.61958150995425,0.364295288292542,0,0.324547393654683,0.522389211897802,0.398873881556595,0.476981248610684,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0.436094052142534,1.49091585508596,1.2663051166458,0.132409180813219,0.286836620748814,0,2.80338800071154,3.20246987189115,1.72667283892012,0,0.134710672069688,0,1.81628913173918,1.72852777344,0.234321431833797,0,0.570471821544449,0.448346041655403,0.117434498643765,0.323745888736263,0.280901613404497,0,0.368502951935304,0.413303124703062,0,2.47266929278557,3.64064544775211,4.31170885089743,0.505008341862199,0.250237039743928,0.277064115484183,4.82875382968922,2.75839016219118,3.30523729594513,0.340296549480063,4.84352016359927,6.40672166455702,2.54318281391474,1.80054657650641,1.64884046781502,8.24449728146013,5.95573940261087,2.02531598689519,1.36411807225678,5.80597680761463,6.44349290496095,0.484938170456436,4.9701342952326,1.30977727695932,2.54340888465731,0,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0,0.829288440122964,0.252320850875628,0,1.56449532329816,3.85944562915731,2.76269842704961,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0.246217006087397,0.468008530278475,0,0,0.335964256397719,0.141775097242386,0.358234090811393,0,0.766765358330422,0,0,0,0,0.12624243342638,0.825472625798197,0.763976851116555,2.34434894420094,0,0.102827492703324,0.600686115687835,2.28661146104463,0.224262168690721,0.87192013766656,0.1466765716419,0,28.6125156681506,0,2.92531928243358,2.08014873822732,1.28603687131071,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,2.39624855491583,17.2292903751171,0,2.02693829334611,2.26023954805422,5.01370697071708,0.336255431980582,0.197030760201927,0,0.385029108839245,0.76228387266739,0,0,0.167516265334349,1.27587750330633,0,2.99161459204025,0.414415513436035,0.12269149171914,1.50051156317903,0.271265023699736,3.32753378449291,0.356857977594324,0.788512075169673,0.234282829985426,0.300946099727719,0,0,0,0.553107505625109,1.30325421702124,3.32861967686659,7.89229874764969,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0.248107807818777,1.68808170616869,0.280660094433074,0.256278298511402,0.511707249066704,0,1.48418066444991,0.308419387605311,0,0.410635780069046,0,0.232420756919918,0.241718899183244,0.40101294060657,0.0920809889358963,0.114814448164607,0.546273504020151,0.786746489756545,0.451199612907412,0.539107359730903,0.784349769176855,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0,0.082509499920588,0.574265537996172,0.650060246036521,1.6068392984416,12.663864096268,1.07834031980251,1.22802939780904,2.06754858726796,1.07420244868274,1.74020032697074,1.27839941124151,8.01288320820636,0.165284915360978,0,0.638063562472921,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0.869932992075073,0.74129687641568,0,0.744316738719335,1.89827654831236,0,1.02359116524534,0.42793898803392,0,1.56989728039846,0.539617372749944,0.54907405947211,0.824686816419805,0.606547444719948,0,0.421258456238981,0,0,1.05650146756755,0.409499734223957,0.424216295861138,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.845086807596724,0,0.0982490410131212,1.07001315444375,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0.670302275535787,0,0.564862804660675,0.43050537267123,0,0,0.459446800413919,0.507447609232169,0,0.569647187174163,0.476463550915578,1.64544909234478,0.648473311192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| |||
|short_description=p4@MICAL1 | |||
}} |
Revision as of 17:20, 13 September 2013
Short description: | p4@MICAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MICAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 178bp_to_uc003ptj.2_5end |
EntrezGene: | MICAL1 |
HGNC: | 20619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.62e-12 | 76 |
skin fibroblast | 5.71e-11 | 23 |
cell of skeletal muscle | 1.79e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.19e-12 | 41 |
integument | 2.41e-11 | 46 |
integumental system | 2.41e-11 | 46 |
surface structure | 4.13e-10 | 99 |
duct of male reproductive system | 3.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.63e-08 | 5 |
myotonic disease | 2.63e-08 | 5 |
muscle tissue disease | 2.63e-08 | 5 |
myopathy | 2.63e-08 | 5 |
muscular disease | 2.63e-08 | 5 |
myotonic dystrophy | 2.63e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.