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FFCP PHASE1:Mm9::chr19:53215026..53215083,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=27360|HGNC=|MCL_coexpression_id=1|UniProt=Q9QYB5,Q3UNK1,Q8BM29|association_with_transcript=91bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end|description=CAGE_peak_2_at_Add3_5end|id=chr19:53215026..53215083,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.25e-12!73;UBERON:0005743!4.25e-12!73;UBERON:0000073!3.29e-11!75;UBERON:0001016!3.29e-11!75;UBERON:0001049!1.07e-09!52;UBERON:0005068!1.07e-09!52;UBERON:0006241!1.07e-09!52;UBERON:0007135!1.07e-09!52;UBERON:0004121!1.74e-09!102;UBERON:0000924!1.74e-09!102;UBERON:0006601!1.74e-09!102;UBERON:0004111!1.84e-09!122;UBERON:0000955!4.19e-09!50;UBERON:0006238!4.19e-09!50;UBERON:0000025!1.01e-08!114;UBERON:0002616!1.33e-08!49;UBERON:0002346!2.63e-08!71;UBERON:0003075!2.63e-08!71;UBERON:0007284!2.63e-08!71;UBERON:0000033!1.35e-07!63;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0002020!8.92e-07!34;UBERON:0000468!9.48e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.57e-13,92;UBERON:0001017,4.69e-12,73;UBERON:0001016,4.03e-11,75;UBERON:0000073,9.52e-11,54;UBERON:0001049,1.20e-09,52;UBERON:0005068,1.20e-09,52;UBERON:0006241,1.20e-09,52;UBERON:0007135,1.20e-09,52;UBERON:0004111,1.78e-09,122;UBERON:0004121,2.24e-09,95;UBERON:0000924,2.24e-09,95;UBERON:0006601,2.24e-09,95;UBERON:0010371,7.79e-09,73;UBERON:0000025,9.75e-09,114;UBERON:0002346,2.20e-08,64;UBERON:0003075,2.20e-08,64;UBERON:0007284,2.20e-08,64;UBERON:0000955,1.44e-07,47;UBERON:0006238,1.44e-07,47;UBERON:0002021,2.68e-07,10;UBERON:0000411,2.68e-07,10;UBERON:0001950,2.68e-07,10;UBERON:0002616,4.27e-07,46;UBERON:0002020,8.72e-07,34|phase1_expression=32.3500671151684,0,0.454999239389536,1.81478526784098,1.50268718983904,1.00727563147134,0.700837921786577,2.06597317506522,2.111830832275,3.7450324211519,0,0,0.856003649656029,0.611942816932982,2.6648780945253,1.01237633694913,0.699561878128147,12.1452933662922,15.6310454310542,7.21462408056651,11.3958008802433,0.0992909512008853,0.522399578277871,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,0.646413698057667,8.55105387553682,4.28451220591882,0,0.635030673459631,0.61506478758457,0,2.3108129580102,1.82858109894342,0.816677425049476,13.811543814318,11.720030167857,9.94695113550217,9.99993529652724,4.78131839470912,12.1377588257788,17.6255545165808,13.6858857146345,1.83546752161682,2.34717403304412,0.872100625521786,16.4764637050854,19.8318497055769,17.2183298599196,2.87505128729943,13.4226084846189,2.17608642603403,2.01656279485478,10.2903774414379,10.8882707176728,8.25075347643908,1.41621522601718,3.1739458756322,2.53532561402472,3.72728985276045,6.22506357277798,0,0.988866362566974,0,9.28760342607055,12.6792040756113,1.76272340924412,1.89008313664367,1.68259969081106,31.7072592688222,43.0693654855646,1.83736198822431,1.62937300731002,3.67687514644008,51.7544640697127,31.0280231547006,39.3232725135983,3.16527090552465,4.20843160571084,1.56274011167028,30.1517638921491,21.9477417912355,40.7971321564083,37.7124589406295,29.8980529678116,10.8111678578674,0.832988126665025,5.29000920747499,14.2033599463822,4.30211938490693,0,0,0.649776417447669,0,6.17955448579708,2.72688516124892,1.55871602761721,1.41335829804136,7.32385782838739,0,0,0,0.216491041011214,0.506719730950197,0,3.31133251185274,8.2860122767095,5.64080128446334,11.2765462397988,11.8741536541735,8.07154240396205,7.08396410597326,9.64227398512779,4.27266410520897,3.46072954828123,19.665512541108,10.6153266233985,6.63244084784378,3.97514733228708,4.363877278217,9.31958806090611,43.331557957709,49.0105293943485,5.62005521458901,0.838705871541442,1.19980546198682,1.01656181658452,25.0150367806054,21.9600289352941,8.04187853522332,28.5071885115333,23.2701066170601,25.973505569945,22.8760180925538,22.0991419555186,7.2156042953854,5.55990068554084,11.7847439296425,1.30120442962704,2.06911893990126,4.14142898552303,7.68594570962147,6.12328492361951,6.14945857367279,5.34099829990454,15.5222022443409,1.72454394346274,1.70195472151037,7.03804496655795,10.302199424096,11.3999372182495,18.805616992197,18.9319565495308,6.56813080501028,2.1066395619397,1.54408744268829,1.70498099637356,21.9553318887632,20.4037672183554,20.7071370680167,19.4130683179872,17.7087808572663,21.1345944655708,15.5797742982773,12.8771232671817,9.45799273174073,10.3672705445493,13.2975645904067,10.4578764314154,10.8187990694746,11.8557062257167,8.45500438190342,46.0534987355439,9.46722433889417,0.330418782983798,1.58670339998127,2.34617075588757,5.34144345279009,13.6599509001419,13.7144796743873,12.6755484991576,8.17970192284004,3.32170343081158,7.90554982675252,8.29406189040889,9.94782360205754,5.8489226135736,4.49409704327111,4.75503709724327,5.17767310461355,6.06937283049861,7.88314737007129,10.1436962105772,10.997171703647,11.2492442557223,9.46833568519301,7.01925562079256,6.6424566590821,5.49495547444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|EntrezGene=27360
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q9QYB5,Q3UNK1,Q8BM29
|association_with_transcript=91bp_to_ENSMUST00000111741,NM_001164099,NM_001164101,uc008hwi.2,uc008hwj.2_5end
|description=CAGE_peak_2_at_Add3_5end
|id=chr19:53215026..53215083,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.25e-12!73;UBERON:0005743!4.25e-12!73;UBERON:0000073!3.29e-11!75;UBERON:0001016!3.29e-11!75;UBERON:0001049!1.07e-09!52;UBERON:0005068!1.07e-09!52;UBERON:0006241!1.07e-09!52;UBERON:0007135!1.07e-09!52;UBERON:0004121!1.74e-09!102;UBERON:0000924!1.74e-09!102;UBERON:0006601!1.74e-09!102;UBERON:0004111!1.84e-09!122;UBERON:0000955!4.19e-09!50;UBERON:0006238!4.19e-09!50;UBERON:0000025!1.01e-08!114;UBERON:0002616!1.33e-08!49;UBERON:0002346!2.63e-08!71;UBERON:0003075!2.63e-08!71;UBERON:0007284!2.63e-08!71;UBERON:0000033!1.35e-07!63;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0002020!8.92e-07!34;UBERON:0000468!9.48e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.57e-13,92;UBERON:0001017,4.69e-12,73;UBERON:0001016,4.03e-11,75;UBERON:0000073,9.52e-11,54;UBERON:0001049,1.20e-09,52;UBERON:0005068,1.20e-09,52;UBERON:0006241,1.20e-09,52;UBERON:0007135,1.20e-09,52;UBERON:0004111,1.78e-09,122;UBERON:0004121,2.24e-09,95;UBERON:0000924,2.24e-09,95;UBERON:0006601,2.24e-09,95;UBERON:0010371,7.79e-09,73;UBERON:0000025,9.75e-09,114;UBERON:0002346,2.20e-08,64;UBERON:0003075,2.20e-08,64;UBERON:0007284,2.20e-08,64;UBERON:0000955,1.44e-07,47;UBERON:0006238,1.44e-07,47;UBERON:0002021,2.68e-07,10;UBERON:0000411,2.68e-07,10;UBERON:0001950,2.68e-07,10;UBERON:0002616,4.27e-07,46;UBERON:0002020,8.72e-07,34
|phase1_expression=32.3500671151684,0,0.454999239389536,1.81478526784098,1.50268718983904,1.00727563147134,0.700837921786577,2.06597317506522,2.111830832275,3.7450324211519,0,0,0.856003649656029,0.611942816932982,2.6648780945253,1.01237633694913,0.699561878128147,12.1452933662922,15.6310454310542,7.21462408056651,11.3958008802433,0.0992909512008853,0.522399578277871,0.799962113967033,1.60586496747019,0.57423196411502,0.86152399231815,0.646413698057667,8.55105387553682,4.28451220591882,0,0.635030673459631,0.61506478758457,0,2.3108129580102,1.82858109894342,0.816677425049476,13.811543814318,11.720030167857,9.94695113550217,9.99993529652724,4.78131839470912,12.1377588257788,17.6255545165808,13.6858857146345,1.83546752161682,2.34717403304412,0.872100625521786,16.4764637050854,19.8318497055769,17.2183298599196,2.87505128729943,13.4226084846189,2.17608642603403,2.01656279485478,10.2903774414379,10.8882707176728,8.25075347643908,1.41621522601718,3.1739458756322,2.53532561402472,3.72728985276045,6.22506357277798,0,0.988866362566974,0,9.28760342607055,12.6792040756113,1.76272340924412,1.89008313664367,1.68259969081106,31.7072592688222,43.0693654855646,1.83736198822431,1.62937300731002,3.67687514644008,51.7544640697127,31.0280231547006,39.3232725135983,3.16527090552465,4.20843160571084,1.56274011167028,30.1517638921491,21.9477417912355,40.7971321564083,37.7124589406295,29.8980529678116,10.8111678578674,0.832988126665025,5.29000920747499,14.2033599463822,4.30211938490693,0,0,0.649776417447669,0,6.17955448579708,2.72688516124892,1.55871602761721,1.41335829804136,7.32385782838739,0,0,0,0.216491041011214,0.506719730950197,0,3.31133251185274,8.2860122767095,5.64080128446334,11.2765462397988,11.8741536541735,8.07154240396205,7.08396410597326,9.64227398512779,4.27266410520897,3.46072954828123,19.665512541108,10.6153266233985,6.63244084784378,3.97514733228708,4.363877278217,9.31958806090611,43.331557957709,49.0105293943485,5.62005521458901,0.838705871541442,1.19980546198682,1.01656181658452,25.0150367806054,21.9600289352941,8.04187853522332,28.5071885115333,23.2701066170601,25.973505569945,22.8760180925538,22.0991419555186,7.2156042953854,5.55990068554084,11.7847439296425,1.30120442962704,2.06911893990126,4.14142898552303,7.68594570962147,6.12328492361951,6.14945857367279,5.34099829990454,15.5222022443409,1.72454394346274,1.70195472151037,7.03804496655795,10.302199424096,11.3999372182495,18.805616992197,18.9319565495308,6.56813080501028,2.1066395619397,1.54408744268829,1.70498099637356,21.9553318887632,20.4037672183554,20.7071370680167,19.4130683179872,17.7087808572663,21.1345944655708,15.5797742982773,12.8771232671817,9.45799273174073,10.3672705445493,13.2975645904067,10.4578764314154,10.8187990694746,11.8557062257167,8.45500438190342,46.0534987355439,9.46722433889417,0.330418782983798,1.58670339998127,2.34617075588757,5.34144345279009,13.6599509001419,13.7144796743873,12.6755484991576,8.17970192284004,3.32170343081158,7.90554982675252,8.29406189040889,9.94782360205754,5.8489226135736,4.49409704327111,4.75503709724327,5.17767310461355,6.06937283049861,7.88314737007129,10.1436962105772,10.997171703647,11.2492442557223,9.46833568519301,7.01925562079256,6.6424566590821,5.49495547444812,4.19550357334122,2.96452627087149,2.8363667971736,3.53806191203765,2.9232074610031,2.43432145666204,3.13530307678142,4.07401362850272,2.5892652370573,2.43202840162553,2.47105271869273,5.75072826109418,4.46569137202204,3.74445207737473,2.27320990152401,2.69096120282868,0.964887042726734,7.7596339869974,12.127450353311,14.5038829033403,11.3729207469376,9.62230017982859,7.20276906999808,8.80761471278251,6.63454402716516,13.24135210492,9.52298165489732,14.6698387164888,10.1595255123758,11.0518388394173,9.40218880779825,0,2.71952841909355,4.42587845717133,2.75936746304733,29.5413085577537,22.504643825703,0.655739781506702,9.84636616097055,8.51872192423893,8.98009111882268,14.4333676480975,8.84184552424442,7.35235624471901,11.0399847007645,9.71545684019746,16.9508397588561,11.8586333383957,36.9519513885078,9.08416545332919,19.0530195923963,17.5917916101862,8.57844639457184,5.30980553359851,5.82673526771955,5.13950046840077,8.29862350925952,8.26845300066164,9.22305443831782,12.9214146584111,9.81541069589265,6.41695281092498,7.9009189483954,2.10837217149998,4.12542172992747,6.12791290356818,5.221771726908,10.0899773350549,10.0738406464848,11.1724347194632,13.1992925025532,12.3411765451591,8.52501857520878,34.7314127934291,4.66030555900404,6.3953235435939,10.3878339353132,18.8913379234209,12.3038366853438,9.43041517624778,7.55048138827282,6.99554007911642,31.5223013417866,3.07567585436135,8.66824845445534,5.00025223898222,2.44878994106098,3.41735569302563,2.0590035588587,1.18984900995699,0.69975726161829,1.38199973804424,3.81868247206045,3.63786392618306,10.3692928234693,11.1245501046455,10.245326504709,9.17122767733946,9.17077555416781,8.84391976261094,8.11443420150492,6.35113369129785,1.86401793926078,5.07323644815771,1.04661582230785,3.47462829959905,6.80579159204167,8.00790905561933,9.46154302748358,11.3836521486381,10.416350787516,11.8491059201053,8.69702834973622,9.21696020025169,1.58005560314089,7.9062833963164,5.54639168690067,3.11809975146708,3.22248052201467,0.993406773906324,1.44234539423963,1.62458479892035,0.807731599585181,1.143102099825,0.907435666231565,0.877120926657772,0.481059208201647,0.935015217452552,9.74940649545409,0,0,0,22.0236137196697,24.774086759556,11.3554007045704,6.43105137237198,39.6241962187937,37.8383734553435,33.1434170285167,36.092417346682,39.5262319390481,26.718218271055,32.4819375877571,33.0761025113585,33.7740902418165,26.7354021300681,21.7459330935764,2.69847103718859,4.38927360741134,7.0000778359195,10.4535888339366,8.17491334249131,8.82448840560068,9.11211583986622,9.68364769022803,10.9112531261217,9.34979683526051,9.37873409593887,10.9403278003924,8.24045265734965,9.92389862275474,8.78762675020883,8.57328644309533,8.69132444586416,10.6100071255038,13.5988347265091,9.56792980873583,8.9146005620208,10.4710725634009,9.0605752179982,9.73820991436601,11.7636725519163,8.2922315733843,10.2439664808753,7.3659519202596,9.37048385536446,10.1005608898393,9.96534152243063,8.0773675547962,6.95692773388472,10.2258315182738,10.8027702149439,11.9909077410214,11.6965804222704,12.247650080753,13.1988949127502,14.117850823649,13.6802023016049
|short_description=p2@Add3
}}

Revision as of 18:00, 13 September 2013

Short description:p2@Add3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Add3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 91bp_to_ENSMUST00000111741, NM_001164099, NM_001164101, uc008hwi.2, uc008hwj.2_5end
EntrezGene:Add3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Add3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B98.55
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.48
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F131.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D351.75
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D637.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.81
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H98.29
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C511.28
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C19.64
adrenal gland, neonate N25.CNhs11223.1377-27I34.27
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H119.67
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B243.33
cerebellum, neonate N30.CNhs11135.1395-42I249.01
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A425.02
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D528.51
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F225.97
diencephalon, neonate N30.CNhs11201.1388-42B222.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.22
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D47.69
eyeball, neonate N00.CNhs11207.633-15C66.12
eyeball, neonate N01.CNhs11140.1532-43E76.15
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A215.52
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C418.81
forelimb, embryo E18.CNhs11008.1520-43B518.93
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E921.96
heart, embryo E12.CNhs11015.353-12F520.40
heart, embryo E13.CNhs11013.376-3I920.71
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C817.71
heart, embryo E16.CNhs11021.457-17C621.13
heart, embryo E17.CNhs11025.479-18E515.58
heart, embryo E18.CNhs11030.1283-20G312.88
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I210.37
heart, neonate N10.CNhs11118.749-24G113.30
heart, neonate N16.CNhs11209.782-15G110.46
heart, neonate N20.CNhs11127.821-26I610.82
heart, neonate N25.CNhs11196.1351-25D311.86
heart, neonate N30.CNhs11202.1390-42D28.46
hippocampus, adult.CNhs10478.13-16E846.05
hippocampus, neonate N00.CNhs11228.627-43G19.47
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D813.66
intestine, embryo E16.CNhs10585.463-22H413.71
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E97.91
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F87.88
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I211.00
kidney, embryo E18.CNhs11001.1288-20C711.25
kidney, neonate N00.CNhs11214.646-21G79.47
kidney, neonate N10.CNhs11206.758-6D57.02
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H14.20
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G212.13
lung, embryo E14.CNhs10604.404-26F814.50
lung, embryo E15.CNhs11020.432-17C511.37
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E513.24
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E614.67
lung, neonate N20.CNhs11109.822-18A410.16
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H29.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C229.54
medulla oblongata, neonate N30.CNhs11200.1396-42A322.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I936.95
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H719.05
ovary, neonate N00.CNhs11217.1299-22I417.59
oviduct, adult pregnant day01.CNhs10500.988-6G68.58
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E58.30
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B911.17
pituitary gland, embryo E16.CNhs11036.449-43F613.20
pituitary gland, embryo E17.CNhs11039.1265-44F512.34
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I734.73
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G418.89
skin, neonate N03.CNhs11215.662-22H312.30
skin, neonate N06.CNhs11097.693-20I59.43
skin, neonate N10.CNhs11108.762-6C47.55
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C931.52
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D411.12
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I58.01
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B711.38
testis, neonate N07.CNhs11222.726-26I410.42
testis, neonate N10.CNhs11204.763-44D911.85
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I25.55
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E422.02
uterus, adult pregnant day19.CNhs10497.590-15F524.77
uterus, adult.CNhs10509.92-27E511.36
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F839.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.09
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A532.48
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B311.70
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C613.20
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B413.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.57e-1392
central nervous system4.69e-1273
nervous system4.03e-1175
regional part of nervous system9.52e-1154
neural tube1.20e-0952
neural rod1.20e-0952
future spinal cord1.20e-0952
neural keel1.20e-0952
anatomical conduit1.78e-09122
ectoderm-derived structure2.24e-0995
ectoderm2.24e-0995
presumptive ectoderm2.24e-0995
ecto-epithelium7.79e-0973
tube9.75e-09114
neurectoderm2.20e-0864
neural plate2.20e-0864
presumptive neural plate2.20e-0864
brain1.44e-0747
future brain1.44e-0747
occipital lobe2.68e-0710
visual cortex2.68e-0710
neocortex2.68e-0710
regional part of brain4.27e-0746
gray matter8.72e-0734







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