FFCP PHASE1:Hg19::chr6:21597765..21597779,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11200 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=104bp_to_AJ420500_5end | |||
|coexpression_cluster_id=C1086 | |||
|description=CAGE_peak_2_at_SOX4_5end | |||
|id=chr6:21597765..21597779,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.22e-21!254;CL:0000012!7.12e-12!682;CL:0002321!1.11e-11!248;CL:0000548!2.56e-11!679;CL:0000004!2.56e-11!679;CL:0000255!2.56e-11!679;CL:0000220!4.28e-11!246;CL:1000449!3.76e-07!16;CL:1000497!8.59e-07!18;CL:0002518!8.59e-07!18;CL:0000144!9.86e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.10e-07;15!CL:1000497;5.69e-07;17!CL:0002518;5.69e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.43e-21,253;CL:0002321,4.43e-12,250;CL:1000449,2.33e-07,15;CL:1000497,5.96e-07,17;CL:0002518,5.96e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.27e-07!239;DOID:162!2.47e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.28e-07,239;DOID:162,2.48e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.16e-08!44;UBERON:0001008!1.90e-08!45;UBERON:0004211!3.76e-07!16;UBERON:0001285!3.76e-07!16;UBERON:0007684!3.76e-07!16;UBERON:0003220!3.76e-07!16;UBERON:0004208!3.76e-07!16;UBERON:0000058!4.26e-07!26;UBERON:0000353!4.73e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.91e-08;30!UBERON:0001008;2.91e-08;30!UBERON:0006555;2.10e-07;15!UBERON:0004819;2.10e-07;15!UBERON:0001285;2.10e-07;15!UBERON:0007684;2.10e-07;15!UBERON:0000353;2.96e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.33e-07,15;UBERON:0009773,2.33e-07,15;UBERON:0001231,2.33e-07,15;UBERON:0001285,2.33e-07,15;UBERON:0007684,2.33e-07,15;UBERON:0004208,2.33e-07,15;UBERON:0000353,3.33e-07,15;UBERON:0006554,3.56e-07,47;UBERON:0001008,5.21e-07,48 | |||
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| |||
|short_description=p2@SOX4 | |||
}} |
Revision as of 19:36, 13 September 2013
Short description: | p2@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SOX4_5end |
Coexpression cluster: | C1086_occipital_parietal_temporal_duodenum_small_Neurons_transitionalcell |
Association with transcript: | 104bp_to_AJ420500_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.43e-21 | 253 |
embryonic cell | 4.43e-12 | 250 |
epithelial cell of nephron | 2.33e-07 | 15 |
kidney cell | 5.96e-07 | 17 |
kidney epithelial cell | 5.96e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.33e-07 | 15 |
renal tubule | 2.33e-07 | 15 |
nephron tubule | 2.33e-07 | 15 |
nephron | 2.33e-07 | 15 |
uriniferous tubule | 2.33e-07 | 15 |
nephrogenic mesenchyme | 2.33e-07 | 15 |
parenchyma | 3.33e-07 | 15 |
urinary system structure | 3.56e-07 | 47 |
renal system | 5.21e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.28e-07 | 239 |
cancer | 2.48e-07 | 235 |
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