FFCP PHASE1:Hg19::chr6:25042231..25042263,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9750|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13872|TSSclassifier=S|UniProt=B7Z6U4|association_with_transcript=0bp_to_ENST00000510784_5end|coexpression_cluster_id=C900|description=CAGE_peak_7_at_FAM65B_5end|id=chr6:25042231..25042263,-|ontology_enrichment_celltype=CL:0000037!1.61e-26!172;CL:0000566!1.61e-26!172;CL:0000542!4.79e-26!53;CL:0000051!4.79e-26!53;CL:0000838!1.59e-25!52;CL:0000988!1.38e-23!182;CL:0002032!1.57e-22!165;CL:0000837!1.57e-22!165;CL:0000791!6.62e-22!18;CL:0000789!6.62e-22!18;CL:0002420!6.62e-22!18;CL:0002419!6.62e-22!18;CL:0000790!6.62e-22!18;CL:0000084!3.22e-21!25;CL:0000827!3.22e-21!25;CL:0000738!2.09e-19!140;CL:0000625!3.24e-14!11;CL:0002031!1.45e-12!124;CL:0002087!3.60e-12!119;CL:0000624!1.09e-08!6|ontology_enrichment_celltype_v019=CL:0000791;3.46e-31;18!CL:0000789;3.46e-31;18!CL:0002419;3.46e-31;18!CL:0000084;3.16e-29;25!CL:0000625;6.61e-22;11!CL:0000542;8.80e-15;53!CL:0000624;4.78e-13;6!CL:0000097;3.32e-09;5!CL:0000898;2.67e-07;3!CL:0000623;4.11e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,3.58e-31,18;CL:0000789,3.58e-31,18;CL:0002420,3.58e-31,18;CL:0002419,3.58e-31,18;CL:0000790,3.58e-31,18;CL:0000084,3.49e-29,25;CL:0000827,3.49e-29,25;CL:0000037,2.91e-28,168;CL:0000838,1.25e-26,52;CL:0000988,5.90e-26,177;CL:0000542,5.93e-26,53;CL:0000051,5.93e-26,53;CL:0002032,9.50e-23,161;CL:0000837,9.50e-23,161;CL:0000625,6.51e-22,11;CL:0000738,2.63e-19,136;CL:0002031,9.96e-14,120;CL:0000624,5.05e-13,6;CL:0002087,6.09e-13,115;CL:0000097,3.92e-09,5;CL:0002028,3.92e-09,5;CL:0000898,2.70e-07,3;CL:0000623,3.67e-07,3;CL:0000825,3.67e-07,3|ontology_enrichment_development_v019=CL:0000790;3.46e-31;18!CL:0000051;8.80e-15;53|ontology_enrichment_disease=DOID:2531!5.90e-07!51;DOID:0060083!5.90e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:1240,5.41e-08,39;DOID:2531,4.08e-07,51;DOID:0060083,4.08e-07,51;DOID:8692,7.26e-07,31|ontology_enrichment_uberon=UBERON:0007023!1.17e-15!115;UBERON:0000178!5.11e-10!15;UBERON:0000179!5.11e-10!15;UBERON:0000463!5.11e-10!15|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-16;15!UBERON:0000179;6.20e-16;15!UBERON:0000463;6.20e-16;15!UBERON:0002390;9.31e-14;32!UBERON:0002193;3.04e-09;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.95e-16,15;UBERON:0000179,5.95e-16,15;UBERON:0000463,5.95e-16,15;UBERON:0002193,1.54e-07,108;UBERON:0002390,1.73e-07,98;UBERON:0003061,1.73e-07,98;UBERON:0004177,6.35e-07,7;UBERON:0005057,6.35e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.328402357799783,0.393553906568396,1.18009283054671,4.60595277716655,0.309632246632152,0,0,0,0.154934401160603,0.568676929949686,26.1304391008014,1.66198622559563,3.81034450193269,1.51907609501096,0.223915474239924,2.91504299417082,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.800791974072025,0,1.98313461835459,0,1.1384259382189,1.17447437874188,1.14681968437569,35.686258716337,22.980851082243,8.69167479757754,7.27826149421182,13.3623659334716,20.3545484009514,9.52963023726865,5.54067853277104,6.15482147455153,3.89653456815823,6.46180649934007,32.1120439147573,33.2300841875432,41.7037950198124,5.76410938765538,8.19373889627233,5.26201294731764,9.94860064029054,8.11448640058147,1.33457906845854,2.40786745280742,1.04535523804977,3.73920830901968,11.4966148080576,18.555882056062,26.8200873540673,9.875527844047,8.46408490013344,7.60361635558699,5.57127940587759,8.19114311388278,14.9916871862815,12.3124171062889,9.03240796613151,6.8546292696409,16.848732334361,7.53086900190555,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.476981248610684,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0.44905874525234,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36315962672562,22.0731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41929561685538,2.11316241631742,2.48793738648926,2.73827911492227,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,5.91092280605782,14.8783026653067,8.47064039446339,0.254094624222463,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,4.74571241800957,5.87001567918944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,5.58192370155386,6.117097657139,3.41788312304498,4.04994018278241,4.93634727703433,3.8908398671563,2.16012574895246,7.9312517629427,0,0,0,0.185803175125719,0,3.20138295067864,0,28.34027074346,7.85172017542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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13872 | |||
|TSSclassifier=S | |||
|UniProt=B7Z6U4 | |||
|association_with_transcript=0bp_to_ENST00000510784_5end | |||
|coexpression_cluster_id=C900 | |||
|description=CAGE_peak_7_at_FAM65B_5end | |||
|id=chr6:25042231..25042263,- | |||
|ontology_enrichment_celltype=CL:0000037!1.61e-26!172;CL:0000566!1.61e-26!172;CL:0000542!4.79e-26!53;CL:0000051!4.79e-26!53;CL:0000838!1.59e-25!52;CL:0000988!1.38e-23!182;CL:0002032!1.57e-22!165;CL:0000837!1.57e-22!165;CL:0000791!6.62e-22!18;CL:0000789!6.62e-22!18;CL:0002420!6.62e-22!18;CL:0002419!6.62e-22!18;CL:0000790!6.62e-22!18;CL:0000084!3.22e-21!25;CL:0000827!3.22e-21!25;CL:0000738!2.09e-19!140;CL:0000625!3.24e-14!11;CL:0002031!1.45e-12!124;CL:0002087!3.60e-12!119;CL:0000624!1.09e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.46e-31;18!CL:0000789;3.46e-31;18!CL:0002419;3.46e-31;18!CL:0000084;3.16e-29;25!CL:0000625;6.61e-22;11!CL:0000542;8.80e-15;53!CL:0000624;4.78e-13;6!CL:0000097;3.32e-09;5!CL:0000898;2.67e-07;3!CL:0000623;4.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.58e-31,18;CL:0000789,3.58e-31,18;CL:0002420,3.58e-31,18;CL:0002419,3.58e-31,18;CL:0000790,3.58e-31,18;CL:0000084,3.49e-29,25;CL:0000827,3.49e-29,25;CL:0000037,2.91e-28,168;CL:0000838,1.25e-26,52;CL:0000988,5.90e-26,177;CL:0000542,5.93e-26,53;CL:0000051,5.93e-26,53;CL:0002032,9.50e-23,161;CL:0000837,9.50e-23,161;CL:0000625,6.51e-22,11;CL:0000738,2.63e-19,136;CL:0002031,9.96e-14,120;CL:0000624,5.05e-13,6;CL:0002087,6.09e-13,115;CL:0000097,3.92e-09,5;CL:0002028,3.92e-09,5;CL:0000898,2.70e-07,3;CL:0000623,3.67e-07,3;CL:0000825,3.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.46e-31;18!CL:0000051;8.80e-15;53 | |||
|ontology_enrichment_disease=DOID:2531!5.90e-07!51;DOID:0060083!5.90e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.41e-08,39;DOID:2531,4.08e-07,51;DOID:0060083,4.08e-07,51;DOID:8692,7.26e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-15!115;UBERON:0000178!5.11e-10!15;UBERON:0000179!5.11e-10!15;UBERON:0000463!5.11e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.20e-16;15!UBERON:0000179;6.20e-16;15!UBERON:0000463;6.20e-16;15!UBERON:0002390;9.31e-14;32!UBERON:0002193;3.04e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.95e-16,15;UBERON:0000179,5.95e-16,15;UBERON:0000463,5.95e-16,15;UBERON:0002193,1.54e-07,108;UBERON:0002390,1.73e-07,98;UBERON:0003061,1.73e-07,98;UBERON:0004177,6.35e-07,7;UBERON:0005057,6.35e-07,7 | |||
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|short_description=p7@FAM65B | |||
}} |
Revision as of 19:42, 13 September 2013
Short description: | p7@FAM65B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_FAM65B_5end |
Coexpression cluster: | C900_CD4_thymus_Hodgkin_CD8_CD34_chronic_CD133 |
Association with transcript: | 0bp_to_ENST00000510784_5end |
EntrezGene: | FAM65B |
HGNC: | 13872 |
UniProt: | B7Z6U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.58e-31 | 18 |
alpha-beta T cell | 3.58e-31 | 18 |
immature T cell | 3.58e-31 | 18 |
mature T cell | 3.58e-31 | 18 |
immature alpha-beta T cell | 3.58e-31 | 18 |
T cell | 3.49e-29 | 25 |
pro-T cell | 3.49e-29 | 25 |
hematopoietic stem cell | 2.91e-28 | 168 |
lymphoid lineage restricted progenitor cell | 1.25e-26 | 52 |
hematopoietic cell | 5.90e-26 | 177 |
lymphocyte | 5.93e-26 | 53 |
common lymphoid progenitor | 5.93e-26 | 53 |
hematopoietic oligopotent progenitor cell | 9.50e-23 | 161 |
hematopoietic multipotent progenitor cell | 9.50e-23 | 161 |
CD8-positive, alpha-beta T cell | 6.51e-22 | 11 |
leukocyte | 2.63e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 9.96e-14 | 120 |
CD4-positive, alpha-beta T cell | 5.05e-13 | 6 |
nongranular leukocyte | 6.09e-13 | 115 |
mast cell | 3.92e-09 | 5 |
basophil mast progenitor cell | 3.92e-09 | 5 |
naive T cell | 2.70e-07 | 3 |
natural killer cell | 3.67e-07 | 3 |
pro-NK cell | 3.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.95e-16 | 15 |
haemolymphatic fluid | 5.95e-16 | 15 |
organism substance | 5.95e-16 | 15 |
hemolymphoid system | 1.54e-07 | 108 |
hematopoietic system | 1.73e-07 | 98 |
blood island | 1.73e-07 | 98 |
hemopoietic organ | 6.35e-07 | 7 |
immune organ | 6.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.41e-08 | 39 |
hematologic cancer | 4.08e-07 | 51 |
immune system cancer | 4.08e-07 | 51 |
myeloid leukemia | 7.26e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.