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FFCP PHASE1:Mm9::chr1:75380160..75380163,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11790|HGNC=|MCL_coexpression_id=10|UniProt=|association_with_transcript=29bp_to_ENSMUST00000146705_5end|description=CAGE_peak_4_at_Speg_5end|id=chr1:75380160..75380163,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.35e-08!23;UBERON:0001009!1.35e-08!23;UBERON:0007100!2.73e-08!18;UBERON:0000948!2.73e-08!18;UBERON:0005498!2.73e-08!18;UBERON:0004140!2.73e-08!18;UBERON:0009881!2.73e-08!18;UBERON:0004141!2.73e-08!18;UBERON:0003084!2.73e-08!18;UBERON:0007005!2.73e-08!18;UBERON:0004139!2.73e-08!18;UBERON:0004291!2.73e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.35e-09,18;UBERON:0000948,9.35e-09,18;UBERON:0005498,9.35e-09,18;UBERON:0004140,9.35e-09,18;UBERON:0009881,9.35e-09,18;UBERON:0004141,9.35e-09,18;UBERON:0003084,9.35e-09,18;UBERON:0007005,9.35e-09,18;UBERON:0004139,9.35e-09,18;UBERON:0004291,9.35e-09,18;UBERON:0004535,1.46e-08,23;UBERON:0001009,1.46e-08,23|phase1_expression=3.04282809499109,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.44573593256819,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,5.13930906052708,0,0,0,0.777719596297134,0.55994568650145,0,0,0,0,0.771778308107841,0.85960031981627,0,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0,0.287536413054709,0,0,0,0.307213066512487,0.395658863190582,0,0,1.11673199600552,0,0.916789486660861,0.589257170947335,1.56608848879013,0.372798891650601,0,0.151143120213571,0.579728977403356,1.72084775396277,0,0,0,0,0.702222100658759,4.94247935476367,5.97507810586598,4.59341446863442,1.69012103732017,6.41632387071589,12.7402619853323,7.11066703153331,0,0,0.505524445014783,0.79928715803342,0,0.593768556259299,2.25530924795977,0.304465478312141,2.07553947530453,0.904335843315735,1.17588707135705,0.376999773989026,0.741584903203122,0.578397427679647,0.884610551949874,2.58826959915855,5.52103796150984,2.90925151881133,0,5.85561594023094,8.58731497935166,0.510914110417183,0,0,0,2.24685959107234,1.37250180845588,1.38219787324151,2.25971616249959,1.27857728665165,1.24672826735736,1.62241263067758,1.83310854930569,0.746441823660558,0,0.210441855886474,1.04096354370163,1.37941262660084,0.540186389416048,2.71268672104287,1.02054748726992,1.66547836370305,1.21812241927647,0.776110112217047,0.862271971731369,2.26927296201383,0.703804496655795,1.97276159184817,3.61461423993277,1.0447564995665,1.4404749548556,5.17489093728082,0,0,0,1.86413195281952,6.80125573945179,4.14142741360334,3.31442629819294,4.9191057936851,6.63348585415727,10.2314935690179,8.04820204198858,5.60473643362414,12.5065485934245,12.9692296622485,8.431156192769,13.4503988431306,8.78200461164202,7.51555945058082,1.47202963994889,1.13195073617213,0,0,1.2797295032114,2.78684006232526,0.77320476793256,1.61346819698674,1.11189021922435,1.14135375667535,1.42358718463353,0.494096864172033,2.26201687920243,0.596869416123452,1.75467678407208,0.898819408654221,1.29682829924817,0.796565093017469,2.27601481143698,2.85621281524322,2.25415471346161,2.8511185898344,1.74557238450863,1.33258057791605,1.39120381673366,0.590440591918409,0.627994911365499,0.740382983530803,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.936113019343682,0,0.717589654087649,0.482443521363367,0.739012760666419,0.37898282354097,1.62964976442026,0.848725428875941,2.11221223459652,1.00503754465089,0.952174563544055,1.17080188714679,0.630540576424764,2.43611158613652,2.07291199254733,1.80249646187312,1.38147985492716,1.73578870297814,0,0,1.47529281905711,0.275936746304732,0.80275294993896,1.99259867206745,0.163934945376675,7.06918596172244,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.809621403349789,0,0.395287777946524,1.60660658210904,1.13552068166615,4.27357448801413,1.46598263418218,3.62934270539578,0,1.45668381692989,1.51161778482376,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,1.26414703174326,0,0,1.70219802876894,2.16073312837572,2.06973894052407,2.7863814554107,1.06404140185364,0.713475270408282,3.1264313914403,0.608929898229199,1.87737366450968,0.42366414172764,0,0.8244312647074,0.645857706783622,0.603129249281559,0.596861720015682,0.164140899745061,1.1659233465194,0.556275906031529,0,1.857481811669,2.03713980106683,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0,1.10717597753397,1.01659733563424,2.16010681643603,2.71814784818809,2.62035076495413,2.02296519577231,1.98368293740806,2.6175594198403,1.29614973291793,0.621339313086926,0.56369293868419,1.49516546043979,1.15820943319968,1.55560950675238,1.29159823477731,2.36538575687089,1.99507305697782,1.5624526181274,0.209718688851422,0.241584120826006,2.01621004380506,0,0.810900861160657,0,0.129920822977795,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.457240839929999,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,4.53460767230423,0.443971906748129,1.07656627931371,0.503653849092235,1.9318959403219,2.81523713176773,2.19781949120718,0.857473516316263,0,2.25900737046827,2.76195141904306,0,4.29632955859219,0.685082519770642,3.0215755895588,2.70009000092722,0.900642406448441,2.26571204492102,2.07104124700728,0.31136204275253,0.798049746802062,1.70733605754134,4.86213434136588,0.838452650511929,0.735374033800057,1.55572709461131,1.85431551515005,1.60459604795908,1.76888048234658,1.52087579934144,2.07488975524684,2.1537546718073,1.92075457214608,2.41228969613576,1.90517476513229,1.73826488917283,2.31491064556446,0.824171801606613,1.03039244094078,2.05721551431249,2.30718548007139,2.86123427936785,2.0348498328526,1.88218760830661,3.80765735512544,2.0122077016005,1.57841826862706,3.12349461845482,1.68342681497322,1.42362021749009,2.36410757701352,3.27384834535751,3.09873682371932,1.92906610981141,1.74867404556562,2.8071793013449,1.50409737833809,2.10417165275728,1.54413993383661,1.85494268496337|short_description=p4@Speg}}
|EntrezGene=11790
|HGNC=
|MCL_coexpression_id=10
|UniProt=
|association_with_transcript=29bp_to_ENSMUST00000146705_5end
|description=CAGE_peak_4_at_Speg_5end
|id=chr1:75380160..75380163,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!1.35e-08!23;UBERON:0001009!1.35e-08!23;UBERON:0007100!2.73e-08!18;UBERON:0000948!2.73e-08!18;UBERON:0005498!2.73e-08!18;UBERON:0004140!2.73e-08!18;UBERON:0009881!2.73e-08!18;UBERON:0004141!2.73e-08!18;UBERON:0003084!2.73e-08!18;UBERON:0007005!2.73e-08!18;UBERON:0004139!2.73e-08!18;UBERON:0004291!2.73e-08!18
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.35e-09,18;UBERON:0000948,9.35e-09,18;UBERON:0005498,9.35e-09,18;UBERON:0004140,9.35e-09,18;UBERON:0009881,9.35e-09,18;UBERON:0004141,9.35e-09,18;UBERON:0003084,9.35e-09,18;UBERON:0007005,9.35e-09,18;UBERON:0004139,9.35e-09,18;UBERON:0004291,9.35e-09,18;UBERON:0004535,1.46e-08,23;UBERON:0001009,1.46e-08,23
|phase1_expression=3.04282809499109,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.44573593256819,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,5.13930906052708,0,0,0,0.777719596297134,0.55994568650145,0,0,0,0,0.771778308107841,0.85960031981627,0,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0,0.287536413054709,0,0,0,0.307213066512487,0.395658863190582,0,0,1.11673199600552,0,0.916789486660861,0.589257170947335,1.56608848879013,0.372798891650601,0,0.151143120213571,0.579728977403356,1.72084775396277,0,0,0,0,0.702222100658759,4.94247935476367,5.97507810586598,4.59341446863442,1.69012103732017,6.41632387071589,12.7402619853323,7.11066703153331,0,0,0.505524445014783,0.79928715803342,0,0.593768556259299,2.25530924795977,0.304465478312141,2.07553947530453,0.904335843315735,1.17588707135705,0.376999773989026,0.741584903203122,0.578397427679647,0.884610551949874,2.58826959915855,5.52103796150984,2.90925151881133,0,5.85561594023094,8.58731497935166,0.510914110417183,0,0,0,2.24685959107234,1.37250180845588,1.38219787324151,2.25971616249959,1.27857728665165,1.24672826735736,1.62241263067758,1.83310854930569,0.746441823660558,0,0.210441855886474,1.04096354370163,1.37941262660084,0.540186389416048,2.71268672104287,1.02054748726992,1.66547836370305,1.21812241927647,0.776110112217047,0.862271971731369,2.26927296201383,0.703804496655795,1.97276159184817,3.61461423993277,1.0447564995665,1.4404749548556,5.17489093728082,0,0,0,1.86413195281952,6.80125573945179,4.14142741360334,3.31442629819294,4.9191057936851,6.63348585415727,10.2314935690179,8.04820204198858,5.60473643362414,12.5065485934245,12.9692296622485,8.431156192769,13.4503988431306,8.78200461164202,7.51555945058082,1.47202963994889,1.13195073617213,0,0,1.2797295032114,2.78684006232526,0.77320476793256,1.61346819698674,1.11189021922435,1.14135375667535,1.42358718463353,0.494096864172033,2.26201687920243,0.596869416123452,1.75467678407208,0.898819408654221,1.29682829924817,0.796565093017469,2.27601481143698,2.85621281524322,2.25415471346161,2.8511185898344,1.74557238450863,1.33258057791605,1.39120381673366,0.590440591918409,0.627994911365499,0.740382983530803,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.936113019343682,0,0.717589654087649,0.482443521363367,0.739012760666419,0.37898282354097,1.62964976442026,0.848725428875941,2.11221223459652,1.00503754465089,0.952174563544055,1.17080188714679,0.630540576424764,2.43611158613652,2.07291199254733,1.80249646187312,1.38147985492716,1.73578870297814,0,0,1.47529281905711,0.275936746304732,0.80275294993896,1.99259867206745,0.163934945376675,7.06918596172244,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.809621403349789,0,0.395287777946524,1.60660658210904,1.13552068166615,4.27357448801413,1.46598263418218,3.62934270539578,0,1.45668381692989,1.51161778482376,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,1.26414703174326,0,0,1.70219802876894,2.16073312837572,2.06973894052407,2.7863814554107,1.06404140185364,0.713475270408282,3.1264313914403,0.608929898229199,1.87737366450968,0.42366414172764,0,0.8244312647074,0.645857706783622,0.603129249281559,0.596861720015682,0.164140899745061,1.1659233465194,0.556275906031529,0,1.857481811669,2.03713980106683,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0,1.10717597753397,1.01659733563424,2.16010681643603,2.71814784818809,2.62035076495413,2.02296519577231,1.98368293740806,2.6175594198403,1.29614973291793,0.621339313086926,0.56369293868419,1.49516546043979,1.15820943319968,1.55560950675238,1.29159823477731,2.36538575687089,1.99507305697782,1.5624526181274,0.209718688851422,0.241584120826006,2.01621004380506,0,0.810900861160657,0,0.129920822977795,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.457240839929999,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,4.53460767230423,0.443971906748129,1.07656627931371,0.503653849092235,1.9318959403219,2.81523713176773,2.19781949120718,0.857473516316263,0,2.25900737046827,2.76195141904306,0,4.29632955859219,0.685082519770642,3.0215755895588,2.70009000092722,0.900642406448441,2.26571204492102,2.07104124700728,0.31136204275253,0.798049746802062,1.70733605754134,4.86213434136588,0.838452650511929,0.735374033800057,1.55572709461131,1.85431551515005,1.60459604795908,1.76888048234658,1.52087579934144,2.07488975524684,2.1537546718073,1.92075457214608,2.41228969613576,1.90517476513229,1.73826488917283,2.31491064556446,0.824171801606613,1.03039244094078,2.05721551431249,2.30718548007139,2.86123427936785,2.0348498328526,1.88218760830661,3.80765735512544,2.0122077016005,1.57841826862706,3.12349461845482,1.68342681497322,1.42362021749009,2.36410757701352,3.27384834535751,3.09873682371932,1.92906610981141,1.74867404556562,2.8071793013449,1.50409737833809,2.10417165275728,1.54413993383661,1.85494268496337
|short_description=p4@Speg
}}

Revision as of 20:59, 13 September 2013

Short description:p4@Speg
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Speg_5end
Coexpression cluster:MCL_coexpression_mm9:10
Association with transcript: 29bp_to_ENSMUST00000146705_5end
EntrezGene:Speg
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p4@Speg

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G18.43
heart, neonate N20.CNhs11127.821-26I613.45
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primary circulatory organ9.35e-0918
heart9.35e-0918
primitive heart tube9.35e-0918
primary heart field9.35e-0918
anterior lateral plate mesoderm9.35e-0918
heart tube9.35e-0918
heart primordium9.35e-0918
cardiac mesoderm9.35e-0918
cardiogenic plate9.35e-0918
heart rudiment9.35e-0918
cardiovascular system1.46e-0823
circulatory system1.46e-0823







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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