FFCP PHASE1:Mm9::chr1:87949618..87949647,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:87949618..87949647,+|id=chr1:87949618..87949647,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000878,4.13e-10,2;CL:0000129,4.13e-10,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.00e-12!22;UBERON:0007499!1.00e-12!22;UBERON:0006925!1.00e-12!22;UBERON:0009497!1.00e-12!22;UBERON:0000015!1.00e-12!22;UBERON:0002423!1.00e-12!22;UBERON:0006235!1.00e-12!22;UBERON:0008835!1.00e-12!22;UBERON:0003894!1.00e-12!22;UBERON:0004161!1.00e-12!22;UBERON:0008836!1.00e-12!22;UBERON:0009854!4.53e-12!23;UBERON:0009856!4.53e-12!23;UBERON:0002365!6.45e-11!25;UBERON:0002330!6.45e-11!25;UBERON:0003929!1.86e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.74e-18,1;UBERON:0002107,6.36e-08,22;UBERON:0007499,6.36e-08,22;UBERON:0006925,6.36e-08,22;UBERON:0009497,6.36e-08,22;UBERON:0000015,6.36e-08,22;UBERON:0002423,6.36e-08,22;UBERON:0006235,6.36e-08,22;UBERON:0008835,6.36e-08,22;UBERON:0003894,6.36e-08,22;UBERON:0004161,6.36e-08,22;UBERON:0008836,6.36e-08,22;UBERON:0009854,1.31e-07,23;UBERON:0009856,1.31e-07,23;UBERON:0002365,4.66e-07,25;UBERON:0002330,4.66e-07,25;UBERON:0005631,4.77e-07,3;UBERON:0000478,4.77e-07,3;UBERON:0000158,4.77e-07,3;UBERON:0004871,4.77e-07,3|phase1_expression=0,0,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0.202860121388503,0.72353147925725,0,0,10.2145192868272,0.549122826376163,0,1.11642284300551,0.312037673114561,0.505157755894224,0,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:87949618..87949647,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:87949618..87949647,+ | |||
|id=chr1:87949618..87949647,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,4.13e-10,2;CL:0000129,4.13e-10,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.00e-12!22;UBERON:0007499!1.00e-12!22;UBERON:0006925!1.00e-12!22;UBERON:0009497!1.00e-12!22;UBERON:0000015!1.00e-12!22;UBERON:0002423!1.00e-12!22;UBERON:0006235!1.00e-12!22;UBERON:0008835!1.00e-12!22;UBERON:0003894!1.00e-12!22;UBERON:0004161!1.00e-12!22;UBERON:0008836!1.00e-12!22;UBERON:0009854!4.53e-12!23;UBERON:0009856!4.53e-12!23;UBERON:0002365!6.45e-11!25;UBERON:0002330!6.45e-11!25;UBERON:0003929!1.86e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.74e-18,1;UBERON:0002107,6.36e-08,22;UBERON:0007499,6.36e-08,22;UBERON:0006925,6.36e-08,22;UBERON:0009497,6.36e-08,22;UBERON:0000015,6.36e-08,22;UBERON:0002423,6.36e-08,22;UBERON:0006235,6.36e-08,22;UBERON:0008835,6.36e-08,22;UBERON:0003894,6.36e-08,22;UBERON:0004161,6.36e-08,22;UBERON:0008836,6.36e-08,22;UBERON:0009854,1.31e-07,23;UBERON:0009856,1.31e-07,23;UBERON:0002365,4.66e-07,25;UBERON:0002330,4.66e-07,25;UBERON:0005631,4.77e-07,3;UBERON:0000478,4.77e-07,3;UBERON:0000158,4.77e-07,3;UBERON:0004871,4.77e-07,3 | |||
|phase1_expression=0,0,0,0.60492842261366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0.209446706813455,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0,0.202860121388503,0.72353147925725,0,0,10.2145192868272,0.549122826376163,0,1.11642284300551,0.312037673114561,0.505157755894224,0,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:87949618..87949647,+ | |||
}} |
Revision as of 21:07, 13 September 2013
Short description: | p@chr1:87949618..87949647, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:87949618..87949647, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 4.13e-10 | 2 |
microglial cell | 4.13e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.74e-18 | 1 |
liver | 6.36e-08 | 22 |
epithelial sac | 6.36e-08 | 22 |
digestive gland | 6.36e-08 | 22 |
epithelium of foregut-midgut junction | 6.36e-08 | 22 |
anatomical boundary | 6.36e-08 | 22 |
hepatobiliary system | 6.36e-08 | 22 |
foregut-midgut junction | 6.36e-08 | 22 |
hepatic diverticulum | 6.36e-08 | 22 |
liver primordium | 6.36e-08 | 22 |
septum transversum | 6.36e-08 | 22 |
liver bud | 6.36e-08 | 22 |
digestive tract diverticulum | 1.31e-07 | 23 |
sac | 1.31e-07 | 23 |
exocrine gland | 4.66e-07 | 25 |
exocrine system | 4.66e-07 | 25 |
extraembryonic membrane | 4.77e-07 | 3 |
extraembryonic structure | 4.77e-07 | 3 |
membranous layer | 4.77e-07 | 3 |
somatic layer of lateral plate mesoderm | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.