FFCP PHASE1:Mm9::chr1:95651267..95651284,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=67026|HGNC=|MCL_coexpression_id=0|UniProt=|association_with_transcript=72bp_to_ENSMUST00000027500_5end|description=CAGE_peak_4_at_Thap4_5end|id=chr1:95651267..95651284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-09,31|phase1_expression=0.640595388419176,2.79180326111489,2.72999543633722,3.93203474698879,2.50447864973174,1.34303417529512,0.467225281191051,0.258246646883153,1.12630977721333,1.17032263160997,1.71217968225505,0.957265907944037,0,0.611942816932982,0,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,2.8064285749853,0.893618560807968,0.783599367416806,0.95995453676044,1.60586496747019,1.72269589234506,1.7230479846363,1.939241094173,1.14014051673824,1.00812051903972,1.77384408524244,0,0,0,0.577703239502549,2.49351968037739,0.612508068787107,2.09265815368454,1.5626706890476,1.0470474879476,0.588231488031014,2.04913645487534,2.42755176515577,1.1330713617802,1.11514624341466,0.550640256485045,0.782391344348039,0.872100625521786,1.09843091367236,0.777719596297134,0.419959264876088,1.43752564364972,0.335565212115473,0,0.672187598284928,1.02903774414379,0,0.515672092277442,1.21389876515759,0.528990979272033,2.53532561402472,1.35537812827653,0.889294796111139,0.449949858640699,0,0,1.19840044207362,1.15265491596466,1.24427534770173,0.810035629990144,0.210324961351382,0,0.441737081903227,0.979926393719632,0.670918297127655,0,0,0.383062014255563,0.46081959976873,0.923204014111357,0.914876436024097,1.04182674111352,0.279182999001381,0,0.61119299110724,0.883885756421003,0.854230084794618,0.372798891650601,1.21161909333094,1.28471652181535,0.869593466105033,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0,1.40444420131752,1.1930122580464,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,3.030874574157,3.29367825117628,3.0331466700887,1.25602267690966,0.258937883647172,1.03909497345377,0.867426633830679,0,0.230615497256059,1.20578112442098,0.823120949949934,0.628332956648377,0.988779870937496,0.289198713839823,1.76922110389975,0.647067399789637,0.441683036920787,0.484875253135222,1.86391761218122,0.292780797011547,0.41889341362691,1.27728527604296,0.599075622529601,0,0.127070227073065,0.748953197024114,0,1.00523481690292,0.521472960576829,1.02286182932132,1.0389402227978,0.486723789203273,0.611036183101898,0.497627882440372,0.505445516867349,1.05220927943237,1.04096354370163,0.229902104433473,0.900310649026746,0.60281927134286,0.544291993210623,0.768682321709099,1.12442069471675,0.258703370739016,0.862271971731369,0.756424320671277,0.879755620819744,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.995171334092466,2.1066395619397,0.51469581422943,0.852490498186778,1.03562886267751,1.64168241986767,1.2604344302271,0.473489471170421,0.393528463494808,1.69693824176116,1.16266972375204,0.804820204198858,1.28441876603886,0.822799249567402,0.820837320395476,1.13496333364198,2.19299981137998,0.658650345873152,1.20785776884335,0,0.720332286654991,1.98251269790279,1.32225283331772,1.06644125267617,1.62565670302307,1.41754207454303,1.4117846723634,0.22237804384487,1.52180500890047,1.89811624617805,0.988193728344065,1.25667604400135,0.795825888164603,1.75467678407208,0.898819408654221,1.72910439899755,2.78797782556114,2.46568271239006,1.14248512609729,3.38123207019241,1.22190796707189,1.35766741017338,1.1221731182451,0.885311519739602,0.738050739898011,0.470996183524124,1.72756029490521,0.296452627087149,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,0.648540907100142,0.823684239564244,0,1.11642284300551,0.936113019343682,0.505157755894224,0.896987067609561,1.4473305640901,0.739012760666419,1.13694847062291,0.977789858652155,1.18821560042632,1.17345124144251,0.837531287209079,0.714130922658041,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0,0.80275294993896,0.820481806145422,0.983609672260053,0.757412781613119,0.631016438832513,0.780877488593277,0.861693590931196,0.716906393857656,1.11399337041197,0,1.21443210502468,1.16902343164525,0.395287777946524,0.321321316421807,0.851640511249612,1.06839362200353,1.46598263418218,0.659880491890142,0,0.728341908464944,0.604647113929502,0.754420319023592,0,0.307435147943927,1.29214146584111,1.09060118843252,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.340439605753788,0.900305470156551,1.16422815404479,1.50035924522115,0.532020700926821,0.891844088010353,0.164549020602121,1.522324745573,0.704015124191131,2.1183207086382,0.882113592219848,0.32977250588296,0.322928853391811,0.965006798850494,1.3130957840345,1.14898629821543,1.1659233465194,0.741701208042039,0.170870880797853,0,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0.509935289981566,0.279902904647316,0.690999869022119,1.90934123603023,2.37251995185852,0.406638934253697,0.972048067396211,0.418176592028937,0.655087691238533,0.674321731924103,0.495920734352016,0.523511883968059,0.777689839750757,0.621339313086926,21.9840246086834,2.24274819065968,0.992750942742586,1.36115831840833,2.19571699912143,1.520605129417,1.5256441023948,1.69265700297135,1.46803082195995,6.52277126230216,6.33666013767304,0,0.810900861160657,0.718976700153791,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0.288635524920988,0.116876902181569,1.36038230169127,1.10992976687032,1.34570784914214,1.84673078000486,0.772758376128762,1.50145980360946,0.915758121336325,0.643105137237198,0,1.12950368523413,0,1.14579102687879,0.171853182343688,0,1.5107877947794,0,0.900642406448441,0,0,0.830298780673413,1.19707462020309,0.512200817262403,0.972426868273176,0.838452650511929,0.919217542250071,0.222246727801615,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,0.377252682772152,0.280924522409647,0.576226371643824,0.287177344778066,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,1.76638704161277,1.02860775715625,0.532427418478012,0.715308569841963,0.872078499793971,0.564656282491984,0.761531471025089,0.548783918618318,0.789209134313529,0.407412341537585,0,0.949080144993393,0.492522411877817,0.409231043169689,1.08455788830176,0.578719832943424,1.49886346762768,0.701794825336225,0.859484216193193,0.765153328275374,1.76473135295612,0.231867835620421|short_description=p4@Thap4}} | ||
|EntrezGene=67026 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt= | |||
|association_with_transcript=72bp_to_ENSMUST00000027500_5end | |||
|description=CAGE_peak_4_at_Thap4_5end | |||
|id=chr1:95651267..95651284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.99e-09,31 | |||
|phase1_expression=0.640595388419176,2.79180326111489,2.72999543633722,3.93203474698879,2.50447864973174,1.34303417529512,0.467225281191051,0.258246646883153,1.12630977721333,1.17032263160997,1.71217968225505,0.957265907944037,0,0.611942816932982,0,0.404950534779652,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,2.8064285749853,0.893618560807968,0.783599367416806,0.95995453676044,1.60586496747019,1.72269589234506,1.7230479846363,1.939241094173,1.14014051673824,1.00812051903972,1.77384408524244,0,0,0,0.577703239502549,2.49351968037739,0.612508068787107,2.09265815368454,1.5626706890476,1.0470474879476,0.588231488031014,2.04913645487534,2.42755176515577,1.1330713617802,1.11514624341466,0.550640256485045,0.782391344348039,0.872100625521786,1.09843091367236,0.777719596297134,0.419959264876088,1.43752564364972,0.335565212115473,0,0.672187598284928,1.02903774414379,0,0.515672092277442,1.21389876515759,0.528990979272033,2.53532561402472,1.35537812827653,0.889294796111139,0.449949858640699,0,0,1.19840044207362,1.15265491596466,1.24427534770173,0.810035629990144,0.210324961351382,0,0.441737081903227,0.979926393719632,0.670918297127655,0,0,0.383062014255563,0.46081959976873,0.923204014111357,0.914876436024097,1.04182674111352,0.279182999001381,0,0.61119299110724,0.883885756421003,0.854230084794618,0.372798891650601,1.21161909333094,1.28471652181535,0.869593466105033,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0,1.40444420131752,1.1930122580464,0.779358013808606,0.70667914902068,0.422530259330042,0,0,0,3.030874574157,3.29367825117628,3.0331466700887,1.25602267690966,0.258937883647172,1.03909497345377,0.867426633830679,0,0.230615497256059,1.20578112442098,0.823120949949934,0.628332956648377,0.988779870937496,0.289198713839823,1.76922110389975,0.647067399789637,0.441683036920787,0.484875253135222,1.86391761218122,0.292780797011547,0.41889341362691,1.27728527604296,0.599075622529601,0,0.127070227073065,0.748953197024114,0,1.00523481690292,0.521472960576829,1.02286182932132,1.0389402227978,0.486723789203273,0.611036183101898,0.497627882440372,0.505445516867349,1.05220927943237,1.04096354370163,0.229902104433473,0.900310649026746,0.60281927134286,0.544291993210623,0.768682321709099,1.12442069471675,0.258703370739016,0.862271971731369,0.756424320671277,0.879755620819744,1.31517439456545,0.834141747676794,0.348252166522167,0.205782136407943,0.995171334092466,2.1066395619397,0.51469581422943,0.852490498186778,1.03562886267751,1.64168241986767,1.2604344302271,0.473489471170421,0.393528463494808,1.69693824176116,1.16266972375204,0.804820204198858,1.28441876603886,0.822799249567402,0.820837320395476,1.13496333364198,2.19299981137998,0.658650345873152,1.20785776884335,0,0.720332286654991,1.98251269790279,1.32225283331772,1.06644125267617,1.62565670302307,1.41754207454303,1.4117846723634,0.22237804384487,1.52180500890047,1.89811624617805,0.988193728344065,1.25667604400135,0.795825888164603,1.75467678407208,0.898819408654221,1.72910439899755,2.78797782556114,2.46568271239006,1.14248512609729,3.38123207019241,1.22190796707189,1.35766741017338,1.1221731182451,0.885311519739602,0.738050739898011,0.470996183524124,1.72756029490521,0.296452627087149,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.763877555344259,0.575392274901621,0.648540907100142,0.823684239564244,0,1.11642284300551,0.936113019343682,0.505157755894224,0.896987067609561,1.4473305640901,0.739012760666419,1.13694847062291,0.977789858652155,1.18821560042632,1.17345124144251,0.837531287209079,0.714130922658041,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,1.08781136763742,0,0,0.80275294993896,0.820481806145422,0.983609672260053,0.757412781613119,0.631016438832513,0.780877488593277,0.861693590931196,0.716906393857656,1.11399337041197,0,1.21443210502468,1.16902343164525,0.395287777946524,0.321321316421807,0.851640511249612,1.06839362200353,1.46598263418218,0.659880491890142,0,0.728341908464944,0.604647113929502,0.754420319023592,0,0.307435147943927,1.29214146584111,1.09060118843252,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.340439605753788,0.900305470156551,1.16422815404479,1.50035924522115,0.532020700926821,0.891844088010353,0.164549020602121,1.522324745573,0.704015124191131,2.1183207086382,0.882113592219848,0.32977250588296,0.322928853391811,0.965006798850494,1.3130957840345,1.14898629821543,1.1659233465194,0.741701208042039,0.170870880797853,0,0.925972636848558,0.188368457004691,0.136694227721025,0.228778173206523,0.509935289981566,0.279902904647316,0.690999869022119,1.90934123603023,2.37251995185852,0.406638934253697,0.972048067396211,0.418176592028937,0.655087691238533,0.674321731924103,0.495920734352016,0.523511883968059,0.777689839750757,0.621339313086926,21.9840246086834,2.24274819065968,0.992750942742586,1.36115831840833,2.19571699912143,1.520605129417,1.5256441023948,1.69265700297135,1.46803082195995,6.52277126230216,6.33666013767304,0,0.810900861160657,0.718976700153791,0.129920822977795,0.358053391334963,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0.288635524920988,0.116876902181569,1.36038230169127,1.10992976687032,1.34570784914214,1.84673078000486,0.772758376128762,1.50145980360946,0.915758121336325,0.643105137237198,0,1.12950368523413,0,1.14579102687879,0.171853182343688,0,1.5107877947794,0,0.900642406448441,0,0,0.830298780673413,1.19707462020309,0.512200817262403,0.972426868273176,0.838452650511929,0.919217542250071,0.222246727801615,0.824140228955577,0.962757628775446,1.01078884705519,1.01391719956096,0.377252682772152,0.280924522409647,0.576226371643824,0.287177344778066,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,1.76638704161277,1.02860775715625,0.532427418478012,0.715308569841963,0.872078499793971,0.564656282491984,0.761531471025089,0.548783918618318,0.789209134313529,0.407412341537585,0,0.949080144993393,0.492522411877817,0.409231043169689,1.08455788830176,0.578719832943424,1.49886346762768,0.701794825336225,0.859484216193193,0.765153328275374,1.76473135295612,0.231867835620421 | |||
|short_description=p4@Thap4 | |||
}} | |||
Revision as of 21:21, 13 September 2013
| Short description: | p4@Thap4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Thap4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 72bp_to_ENSMUST00000027500_5end |
| EntrezGene: | Thap4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.99e-09 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
