FFCP PHASE1:Hg19::chr6:85473156..85473210,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9096|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11595|TSSclassifier=S|UniProt=Q8IW86|association_with_transcript=0bp_to_ENST00000416980,uc010kbq.1_5end|description=CAGE_peak_2_at_TBX18_5end|id=chr6:85473156..85473210,-|ontology_enrichment_celltype=CL:0000222!4.55e-23!119;CL:0000055!8.69e-23!180;CL:0000057!3.34e-19!75;CL:0000680!3.57e-13!57;CL:0000056!3.57e-13!57;CL:0000355!3.57e-13!57;CL:0000187!3.16e-12!54;CL:0000183!1.16e-11!59;CL:0002620!7.71e-11!23;CL:0000213!7.91e-11!57;CL:0000215!7.91e-11!57;CL:0000077!1.29e-09!19;CL:0000393!4.00e-09!60;CL:0000211!4.00e-09!60;CL:0000192!6.06e-09!42;CL:0000514!6.06e-09!42;CL:0000220!3.09e-08!246;CL:0000076!5.75e-08!62;CL:0002321!7.35e-08!248;CL:0000144!9.05e-07!625|ontology_enrichment_celltype_v019=CL:0002620;1.96e-11;23!CL:0000077;2.73e-11;19!CL:0000057;5.92e-08;73!CL:0000071;6.50e-07;18!CL:0002139;7.83e-07;24!CL:0000187;8.70e-07;55|ontology_enrichment_celltype_v019_2=CL:0000222,6.56e-23,121;CL:0000057,2.23e-19,76;CL:0000680,3.95e-12,58;CL:0000056,3.95e-12,58;CL:0000355,3.95e-12,58;CL:0002620,8.26e-12,23;CL:0000213,1.16e-11,58;CL:0000215,1.16e-11,58;CL:0000077,2.49e-11,19;CL:0000187,4.47e-11,55;CL:0000076,6.15e-10,63;CL:0000048,9.20e-10,427;CL:0000723,3.26e-09,433;CL:0000393,1.14e-08,61;CL:0000211,1.14e-08,61;CL:0000034,3.26e-08,441;CL:0002321,5.89e-08,250;CL:0000192,6.57e-08,43;CL:0000514,6.57e-08,43;CL:0000071,8.56e-07,18;CL:0002546,8.56e-07,18|ontology_enrichment_development_v019=CL:0000355;6.03e-07;58!CL:0002546;6.50e-07;18!CL:0000222;8.57e-07;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!5.37e-16!84;UBERON:0004290!2.11e-14!70;UBERON:0000914!5.07e-14!83;UBERON:0002329!5.07e-14!83;UBERON:0003077!5.07e-14!83;UBERON:0003059!5.07e-14!83;UBERON:0007282!5.07e-14!83;UBERON:0009618!5.07e-14!83;UBERON:0007285!5.07e-14!83;UBERON:0002049!7.47e-14!79;UBERON:0007798!7.47e-14!79;UBERON:0000486!2.05e-12!82;UBERON:0002385!2.70e-12!63;UBERON:0001015!2.70e-12!63;UBERON:0000383!2.70e-12!63;UBERON:0001981!4.33e-12!60;UBERON:0007500!4.33e-12!60;UBERON:0004537!4.33e-12!60;UBERON:0006965!4.33e-12!60;UBERON:0001134!5.07e-12!61;UBERON:0002036!5.07e-12!61;UBERON:0003082!5.07e-12!61;UBERON:0000055!6.85e-12!69;UBERON:0001009!6.01e-11!113;UBERON:0004535!6.51e-11!110;UBERON:0000490!3.53e-10!138;UBERON:0001637!2.40e-09!42;UBERON:0003509!2.40e-09!42;UBERON:0004572!2.40e-09!42;UBERON:0003914!9.88e-09!118;UBERON:0005256!1.19e-08!143;UBERON:0002100!5.48e-08!216;UBERON:0000475!3.98e-07!365;UBERON:0004573!5.44e-07!33;UBERON:0004571!5.44e-07!33;UBERON:0002097!6.10e-07!40;UBERON:0002199!6.11e-07!45;UBERON:0002416!6.11e-07!45|ontology_enrichment_uberon_v019=UBERON:0007500;2.85e-07;56!UBERON:0001981;2.85e-07;56!UBERON:0004537;2.85e-07;56!UBERON:0001637;4.23e-07;42!UBERON:0003509;4.23e-07;42!UBERON:0004572;4.23e-07;42!UBERON:0004638;6.50e-07;18!UBERON:0001986;6.50e-07;18!UBERON:0004852;6.50e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.67e-15,83;UBERON:0002329,3.79e-13,71;UBERON:0003059,3.79e-13,71;UBERON:0007282,3.79e-13,71;UBERON:0004290,3.79e-13,71;UBERON:0009618,3.79e-13,71;UBERON:0007524,8.68e-13,73;UBERON:0003077,1.02e-12,72;UBERON:0007285,1.02e-12,72;UBERON:0007500,9.34e-12,59;UBERON:0001981,9.34e-12,59;UBERON:0004537,9.34e-12,59;UBERON:0006965,9.34e-12,59;UBERON:0000490,1.61e-11,148;UBERON:0007503,2.53e-11,78;UBERON:0002049,3.64e-11,78;UBERON:0007798,3.64e-11,78;UBERON:0000055,9.78e-11,68;UBERON:0002385,1.84e-10,64;UBERON:0001015,1.84e-10,64;UBERON:0000383,1.84e-10,64;UBERON:0001134,2.17e-10,62;UBERON:0002036,2.17e-10,62;UBERON:0003082,2.17e-10,62;UBERON:0000486,2.17e-10,83;UBERON:0004535,1.27e-09,109;UBERON:0005256,2.33e-09,122;UBERON:0001009,7.35e-09,112;UBERON:0003914,7.69e-09,117;UBERON:0001637,1.89e-08,42;UBERON:0003509,1.89e-08,42;UBERON:0004572,1.89e-08,42;UBERON:0003104,3.07e-08,160;UBERON:0009142,3.07e-08,160;UBERON:0002199,3.56e-08,46;UBERON:0002416,3.56e-08,46;UBERON:0002097,4.66e-08,41;UBERON:0000926,6.86e-08,315;UBERON:0004120,6.86e-08,315;UBERON:0006603,6.86e-08,315;UBERON:0002100,3.75e-07,199;UBERON:0004638,8.56e-07,18;UBERON:0001986,8.56e-07,18;UBERON:0004852,8.56e-07,18|phase1_expression=8.53888382571616,5.1384125733836,5.63817616383885,4.00293193412522,1.78784437770915,0.872338524100369,0,1.26343974685366,1.56711376919903,0,0,6.77168253603534,4.74780560811216,3.83675694176145,1.32558950291166,2.01697543935533,1.80808358407193,1.46062018077475,2.92759679274304,0,0,0,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0.309632246632152,0.919421224478927,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,9.38981203585091,2.81297636055767,4.3372698286148,1.50401373190767,1.59331170856906,3.1811437882044,2.433174351513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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9096 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11595 | |||
|TSSclassifier=S | |||
|UniProt=Q8IW86 | |||
|association_with_transcript=0bp_to_ENST00000416980,uc010kbq.1_5end | |||
|description=CAGE_peak_2_at_TBX18_5end | |||
|id=chr6:85473156..85473210,- | |||
|ontology_enrichment_celltype=CL:0000222!4.55e-23!119;CL:0000055!8.69e-23!180;CL:0000057!3.34e-19!75;CL:0000680!3.57e-13!57;CL:0000056!3.57e-13!57;CL:0000355!3.57e-13!57;CL:0000187!3.16e-12!54;CL:0000183!1.16e-11!59;CL:0002620!7.71e-11!23;CL:0000213!7.91e-11!57;CL:0000215!7.91e-11!57;CL:0000077!1.29e-09!19;CL:0000393!4.00e-09!60;CL:0000211!4.00e-09!60;CL:0000192!6.06e-09!42;CL:0000514!6.06e-09!42;CL:0000220!3.09e-08!246;CL:0000076!5.75e-08!62;CL:0002321!7.35e-08!248;CL:0000144!9.05e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.96e-11;23!CL:0000077;2.73e-11;19!CL:0000057;5.92e-08;73!CL:0000071;6.50e-07;18!CL:0002139;7.83e-07;24!CL:0000187;8.70e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.56e-23,121;CL:0000057,2.23e-19,76;CL:0000680,3.95e-12,58;CL:0000056,3.95e-12,58;CL:0000355,3.95e-12,58;CL:0002620,8.26e-12,23;CL:0000213,1.16e-11,58;CL:0000215,1.16e-11,58;CL:0000077,2.49e-11,19;CL:0000187,4.47e-11,55;CL:0000076,6.15e-10,63;CL:0000048,9.20e-10,427;CL:0000723,3.26e-09,433;CL:0000393,1.14e-08,61;CL:0000211,1.14e-08,61;CL:0000034,3.26e-08,441;CL:0002321,5.89e-08,250;CL:0000192,6.57e-08,43;CL:0000514,6.57e-08,43;CL:0000071,8.56e-07,18;CL:0002546,8.56e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000355;6.03e-07;58!CL:0002546;6.50e-07;18!CL:0000222;8.57e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.37e-16!84;UBERON:0004290!2.11e-14!70;UBERON:0000914!5.07e-14!83;UBERON:0002329!5.07e-14!83;UBERON:0003077!5.07e-14!83;UBERON:0003059!5.07e-14!83;UBERON:0007282!5.07e-14!83;UBERON:0009618!5.07e-14!83;UBERON:0007285!5.07e-14!83;UBERON:0002049!7.47e-14!79;UBERON:0007798!7.47e-14!79;UBERON:0000486!2.05e-12!82;UBERON:0002385!2.70e-12!63;UBERON:0001015!2.70e-12!63;UBERON:0000383!2.70e-12!63;UBERON:0001981!4.33e-12!60;UBERON:0007500!4.33e-12!60;UBERON:0004537!4.33e-12!60;UBERON:0006965!4.33e-12!60;UBERON:0001134!5.07e-12!61;UBERON:0002036!5.07e-12!61;UBERON:0003082!5.07e-12!61;UBERON:0000055!6.85e-12!69;UBERON:0001009!6.01e-11!113;UBERON:0004535!6.51e-11!110;UBERON:0000490!3.53e-10!138;UBERON:0001637!2.40e-09!42;UBERON:0003509!2.40e-09!42;UBERON:0004572!2.40e-09!42;UBERON:0003914!9.88e-09!118;UBERON:0005256!1.19e-08!143;UBERON:0002100!5.48e-08!216;UBERON:0000475!3.98e-07!365;UBERON:0004573!5.44e-07!33;UBERON:0004571!5.44e-07!33;UBERON:0002097!6.10e-07!40;UBERON:0002199!6.11e-07!45;UBERON:0002416!6.11e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;2.85e-07;56!UBERON:0001981;2.85e-07;56!UBERON:0004537;2.85e-07;56!UBERON:0001637;4.23e-07;42!UBERON:0003509;4.23e-07;42!UBERON:0004572;4.23e-07;42!UBERON:0004638;6.50e-07;18!UBERON:0001986;6.50e-07;18!UBERON:0004852;6.50e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.67e-15,83;UBERON:0002329,3.79e-13,71;UBERON:0003059,3.79e-13,71;UBERON:0007282,3.79e-13,71;UBERON:0004290,3.79e-13,71;UBERON:0009618,3.79e-13,71;UBERON:0007524,8.68e-13,73;UBERON:0003077,1.02e-12,72;UBERON:0007285,1.02e-12,72;UBERON:0007500,9.34e-12,59;UBERON:0001981,9.34e-12,59;UBERON:0004537,9.34e-12,59;UBERON:0006965,9.34e-12,59;UBERON:0000490,1.61e-11,148;UBERON:0007503,2.53e-11,78;UBERON:0002049,3.64e-11,78;UBERON:0007798,3.64e-11,78;UBERON:0000055,9.78e-11,68;UBERON:0002385,1.84e-10,64;UBERON:0001015,1.84e-10,64;UBERON:0000383,1.84e-10,64;UBERON:0001134,2.17e-10,62;UBERON:0002036,2.17e-10,62;UBERON:0003082,2.17e-10,62;UBERON:0000486,2.17e-10,83;UBERON:0004535,1.27e-09,109;UBERON:0005256,2.33e-09,122;UBERON:0001009,7.35e-09,112;UBERON:0003914,7.69e-09,117;UBERON:0001637,1.89e-08,42;UBERON:0003509,1.89e-08,42;UBERON:0004572,1.89e-08,42;UBERON:0003104,3.07e-08,160;UBERON:0009142,3.07e-08,160;UBERON:0002199,3.56e-08,46;UBERON:0002416,3.56e-08,46;UBERON:0002097,4.66e-08,41;UBERON:0000926,6.86e-08,315;UBERON:0004120,6.86e-08,315;UBERON:0006603,6.86e-08,315;UBERON:0002100,3.75e-07,199;UBERON:0004638,8.56e-07,18;UBERON:0001986,8.56e-07,18;UBERON:0004852,8.56e-07,18 | |||
|phase1_expression=8.53888382571616,5.1384125733836,5.63817616383885,4.00293193412522,1.78784437770915,0.872338524100369,0,1.26343974685366,1.56711376919903,0,0,6.77168253603534,4.74780560811216,3.83675694176145,1.32558950291166,2.01697543935533,1.80808358407193,1.46062018077475,2.92759679274304,0,0,0,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0.309632246632152,0.919421224478927,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,9.38981203585091,2.81297636055767,4.3372698286148,1.50401373190767,1.59331170856906,3.1811437882044,2.43317435151318,0.0945348171640679,0.221729397462564,0.87834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,4.77029777680092,2.58070378531837,3.47140501607594,3.39184765154406,3.77549492588915,4.40188867104108,2.08994966536811,0,0,0.66944122552934,4.83395180530976,3.80136052859256,7.32186172644509,0.735326160691737,3.24056779152704,5.00078478390847,3.14341121676638,1.35133776579987,3.06633274931766,2.84779697870439,2.01521918323448,0,0,0,9.44246708221105,4.43206790826029,4.50191214764944,3.15520282823695,2.83734705758686,1.68203280042692,2.1349799145941,1.72667283892012,7.46906484959439,8.62148301246004,4.7403951902903,1.66493170409425,0.576175924479999,9.60717870518566,2.80944069147288,4.56377457235559,7.47243402759005,11.508580867089,6.151171885989,4.77532742787645,8.16616685019573,0.245668634623536,9.81594921169772,0,0.247266929278557,0.910161361938026,0.718618141816238,2.02003336744879,1.25118519871964,8.03485934904131,0,0.919463387397059,1.50238058906597,5.21788042536097,5.74046834204358,0.85422955527427,2.96704661623387,6.90209520994125,3.81294358182224,5.66809188100384,4.83903826462134,7.42615861861571,5.16416127354353,3.78650661366172,5.24684422261106,8.08230284094059,3.19508633264953,2.61955455391865,6.44330250779853,0.773043412653187,3.27295344709002,0.573609190778008,0,0,0,0,0,0,1.56449532329816,3.21620469096443,0,8.35862270457562,6.49691533502627,0,0,0,0,0,0,0,0,0,0,1.40241773803446,2.8810180793198,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,1.29623823221941,8.47101593806844,1.03993478527958,1.44331342025273,0,1.87853910777315,6.20775725372617,5.09284063834272,8.56143685055692,0,0,0,0,0,0,0,0.708875486211932,3.49278238541108,0.290633938513962,0,0,0,0.207328115540772,0.288239906833923,0,0.126995788584338,0,0,0,0.411309970813294,0,0,5.38229204857731,1.30788020649984,5.5737097223922,1.68053230485111,3.57656445851882,2.535908257668,0,1.04007436911366,6.17297698229141,2.83698264046557,7.72624319146688,1.28680194292333,3.25572963234866,6.58592269424615,3.58309802723109,1.77695974371273,3.95975936466715,8.741741934728,2.61460037580088,5.59848750619519,0,0,0,1.4377491329495,0,2.85273810081437,4.1986578933598,4.10952645100767,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,3.00102312635806,1.08506009479894,1.03985430765404,4.10386674233472,5.20417969611984,6.2084949946138,1.20378439891088,0,2.0694614258501,0.664225598535437,0.921845842708516,6.25562024170197,0.783204629850962,0.343143423810856,0,0,0,11.5188477149579,6.65741758041988,9.37409909322009,5.95458738765064,5.98501695823444,3.08726103876381,3.71603532841533,4.09365799253363,2.2519548960105,4.45254199334973,2.62156479464514,1.06537035187876,2.79232330446951,3.63478100428535,1.85936605535935,0,0,0,0.114814448164607,2.00300284807389,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,1.35473218771926,1.00337954770971,0,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.309123034943167,8.97380755219765,7.26083599301174,1.14853107599234,0.650060246036521,4.82051789532479,1.45006077438183,1.69453478826109,3.07007349452259,3.30807773962873,5.6932729780185,3.33538396002726,3.74997160630844,0.979352392114111,0.495854746082934,0,2.4246415373971,0.50578890427775,0.929691098594572,0.94443704049192,0.6970372701606,2.7723022215848,1.06461206063404,1.73986598415015,1.48259375283136,2.43312307461385,2.97726695487734,3.16379424718726,4.00323407240032,2.55897791311334,2.1396949401696,1.27281299170375,0.78494864019923,3.77732160924961,3.56898138656871,4.00562167975334,1.81964233415984,0,2.94880919367287,3.41343617362713,7.55511817856982,1.05650146756755,3.68549760801562,4.66637925447252,2.26016233240486,4.96228809191512,1.32687795048244,3.06915619677634,0.578775534266688,8.52663177660623,2.63783490051515,3.40805847909725,1.40847801266121,4.4457519183256,3.242218353433,3.92338156629375,0.354761064070598,2.74439925886963,0.658589785919804,9.48682934414288,3.14941248220485,0.577332676353072,0,0,0.376575203107117,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,7.59624669541198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2661503163781,28.6305418102292,25.527918681922,0,0,0,0,0,0,0,3.07667176470977,0,0,0,19.8157922332283,6.83018765915069,24.8800168700378,0,0.140669416410513,5.23150913607658,0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| |||
|short_description=p2@TBX18 | |||
}} |
Revision as of 22:01, 13 September 2013
Short description: | p2@TBX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TBX18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416980, uc010kbq.1_5end |
EntrezGene: | TBX18 |
HGNC: | 11595 |
UniProt: | Q8IW86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.56e-23 | 121 |
fibroblast | 2.23e-19 | 76 |
muscle precursor cell | 3.95e-12 | 58 |
myoblast | 3.95e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.95e-12 | 58 |
skin fibroblast | 8.26e-12 | 23 |
lining cell | 1.16e-11 | 58 |
barrier cell | 1.16e-11 | 58 |
mesothelial cell | 2.49e-11 | 19 |
muscle cell | 4.47e-11 | 55 |
squamous epithelial cell | 6.15e-10 | 63 |
multi fate stem cell | 9.20e-10 | 427 |
somatic stem cell | 3.26e-09 | 433 |
electrically responsive cell | 1.14e-08 | 61 |
electrically active cell | 1.14e-08 | 61 |
stem cell | 3.26e-08 | 441 |
embryonic cell | 5.89e-08 | 250 |
smooth muscle cell | 6.57e-08 | 43 |
smooth muscle myoblast | 6.57e-08 | 43 |
blood vessel endothelial cell | 8.56e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.56e-07 | 18 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.