FFCP PHASE1:Hg19::chr6:89745175..89745188,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1422|description=CAGE_peak_at_chr6:89745175..89745188,-|id=chr6:89745175..89745188,-|ontology_enrichment_celltype=CL:0002057!9.82e-13!42;CL:0000860!2.65e-12!45;CL:0000134!1.32e-08!358;CL:0000766!1.45e-08!76;CL:0000557!4.22e-08!71;CL:0002320!5.36e-08!365;CL:0000839!1.50e-07!70;CL:0002009!1.71e-07!65;CL:0000048!2.58e-07!430;CL:0000723!3.34e-07!436;CL:0002194!3.65e-07!63;CL:0000576!3.65e-07!63;CL:0000040!3.65e-07!63;CL:0000559!3.65e-07!63;CL:0000034!4.90e-07!444|ontology_enrichment_celltype_v019=CL:0000860;6.45e-26;33!CL:0002057;6.45e-26;33!CL:0000473;7.66e-18;39!CL:0000234;7.66e-18;39!CL:0000576;3.74e-15;48!CL:0000766;2.62e-11;69!CL:0002393;2.37e-08;6!CL:0002397;2.37e-08;6!CL:0002087;7.47e-07;104!CL:0000136;9.34e-07;13|ontology_enrichment_celltype_v019_2=CL:0000860,5.68e-32,42;CL:0002057,5.68e-32,42;CL:0000473,1.73e-27,48;CL:0000234,1.73e-27,48;CL:0002194,3.27e-21,59;CL:0000576,3.27e-21,59;CL:0000040,3.27e-21,59;CL:0000559,3.27e-21,59;CL:0002009,2.11e-20,61;CL:0000766,5.39e-19,72;CL:0000839,1.36e-18,66;CL:0000557,2.91e-18,67;CL:0000134,1.52e-11,354;CL:0000763,2.20e-11,108;CL:0000049,2.20e-11,108;CL:0002320,3.52e-11,361;CL:0000219,6.75e-10,386;CL:0002087,3.79e-09,115;CL:0002031,1.28e-08,120;CL:0000034,1.38e-08,441;CL:0000048,2.51e-08,427;CL:0000738,2.94e-08,136;CL:0000723,4.14e-08,433|ontology_enrichment_development_v019=CL:0002057;3.31e-22;42|ontology_enrichment_disease=DOID:2394!2.27e-09!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.58e-07!375;UBERON:0002371!5.27e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-15,76;UBERON:0001474,2.87e-14,82;UBERON:0004765,1.11e-12,90;UBERON:0002405,3.71e-12,93;UBERON:0002390,2.36e-11,98;UBERON:0003061,2.36e-11,98;UBERON:0001434,4.69e-11,100;UBERON:0002384,1.10e-10,371;UBERON:0002193,5.69e-10,108|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,4.9859586767869,3.60980005446255,2.38711957787437,0,0,0.257575567634187,0,0,0,0.464858073811369,0,0.309706370895104,0.863077176966451,1.0246428261164,2.36482229888585,2.06847408441971,2.5819387343353,5.41705946377367,0.564727018627814,0,0.449446968890169,13.4676912643197,2.88836124368484,5.11469700639233,0,0,0,15.0908804086864,2.8369261234557,4.9825779919646,0,0,0.434377689410233,4.84319602106695,5.15588690382591,6.32924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,2.38336525463794,2.0078563452417,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,1.26216887122057,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,1.25381931783988,1.74380363108377,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.246381468041427,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0.413509717453592,0,0.145016693914229,0,0.0890320356467374,0.495854746082934,0.192190067365106,0.893288987462089,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0,0,1.02547850262301,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0.196854963029498,0,0.795229689809303,0,0,0,0,0.674921674654501,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,3.26410682021684,7.2700069266583,9.80305845643077,9.18043365987452,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0.149254802886874,1.16856654923612,0,0.757612021100357,0,0,1.37304041038154,1.81477108515887,0.466311601748341,0.73927574994817,0.159296767163702,0.899606224327209,0.155262956876259,1.24411862352257,0.265841714557995,0,1.6528336989694,0.761610424337591,0.813741466409323,2.00033525122815,0.429642228169954,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.685952037749674,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0.93061915699296,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr6:89745175..89745188,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1422 | |||
|description=CAGE_peak_at_chr6:89745175..89745188,- | |||
|id=chr6:89745175..89745188,- | |||
|ontology_enrichment_celltype=CL:0002057!9.82e-13!42;CL:0000860!2.65e-12!45;CL:0000134!1.32e-08!358;CL:0000766!1.45e-08!76;CL:0000557!4.22e-08!71;CL:0002320!5.36e-08!365;CL:0000839!1.50e-07!70;CL:0002009!1.71e-07!65;CL:0000048!2.58e-07!430;CL:0000723!3.34e-07!436;CL:0002194!3.65e-07!63;CL:0000576!3.65e-07!63;CL:0000040!3.65e-07!63;CL:0000559!3.65e-07!63;CL:0000034!4.90e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.45e-26;33!CL:0002057;6.45e-26;33!CL:0000473;7.66e-18;39!CL:0000234;7.66e-18;39!CL:0000576;3.74e-15;48!CL:0000766;2.62e-11;69!CL:0002393;2.37e-08;6!CL:0002397;2.37e-08;6!CL:0002087;7.47e-07;104!CL:0000136;9.34e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.68e-32,42;CL:0002057,5.68e-32,42;CL:0000473,1.73e-27,48;CL:0000234,1.73e-27,48;CL:0002194,3.27e-21,59;CL:0000576,3.27e-21,59;CL:0000040,3.27e-21,59;CL:0000559,3.27e-21,59;CL:0002009,2.11e-20,61;CL:0000766,5.39e-19,72;CL:0000839,1.36e-18,66;CL:0000557,2.91e-18,67;CL:0000134,1.52e-11,354;CL:0000763,2.20e-11,108;CL:0000049,2.20e-11,108;CL:0002320,3.52e-11,361;CL:0000219,6.75e-10,386;CL:0002087,3.79e-09,115;CL:0002031,1.28e-08,120;CL:0000034,1.38e-08,441;CL:0000048,2.51e-08,427;CL:0000738,2.94e-08,136;CL:0000723,4.14e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-22;42 | |||
|ontology_enrichment_disease=DOID:2394!2.27e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.58e-07!375;UBERON:0002371!5.27e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-15,76;UBERON:0001474,2.87e-14,82;UBERON:0004765,1.11e-12,90;UBERON:0002405,3.71e-12,93;UBERON:0002390,2.36e-11,98;UBERON:0003061,2.36e-11,98;UBERON:0001434,4.69e-11,100;UBERON:0002384,1.10e-10,371;UBERON:0002193,5.69e-10,108 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,4.9859586767869,3.60980005446255,2.38711957787437,0,0,0.257575567634187,0,0,0,0.464858073811369,0,0.309706370895104,0.863077176966451,1.0246428261164,2.36482229888585,2.06847408441971,2.5819387343353,5.41705946377367,0.564727018627814,0,0.449446968890169,13.4676912643197,2.88836124368484,5.11469700639233,0,0,0,15.0908804086864,2.8369261234557,4.9825779919646,0,0,0.434377689410233,4.84319602106695,5.15588690382591,6.32924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,2.38336525463794,2.0078563452417,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.515281080091258,0,0.168776332241266,0.0974370051611986,1.26216887122057,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,1.25381931783988,1.74380363108377,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.246381468041427,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0,0.413509717453592,0,0.145016693914229,0,0.0890320356467374,0.495854746082934,0.192190067365106,0.893288987462089,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.192444225451024,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0,0,1.02547850262301,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.379119477770928,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0.196854963029498,0,0.795229689809303,0,0,0,0,0.674921674654501,0,0,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,3.26410682021684,7.2700069266583,9.80305845643077,9.18043365987452,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0.149254802886874,1.16856654923612,0,0.757612021100357,0,0,1.37304041038154,1.81477108515887,0.466311601748341,0.73927574994817,0.159296767163702,0.899606224327209,0.155262956876259,1.24411862352257,0.265841714557995,0,1.6528336989694,0.761610424337591,0.813741466409323,2.00033525122815,0.429642228169954,0.464033759878494,0,0,0,0,0,0,0,0.521988583930423,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.685952037749674,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0,0,0,0,0.93061915699296,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:89745175..89745188,- | |||
}} |
Revision as of 22:05, 13 September 2013
Short description: | p@chr6:89745175..89745188, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:89745175..89745188, - |
Coexpression cluster: | C1422_mature_CD14_Mast_Eosinophils_immature_heart_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.68e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.68e-32 | 42 |
defensive cell | 1.73e-27 | 48 |
phagocyte | 1.73e-27 | 48 |
monopoietic cell | 3.27e-21 | 59 |
monocyte | 3.27e-21 | 59 |
monoblast | 3.27e-21 | 59 |
promonocyte | 3.27e-21 | 59 |
macrophage dendritic cell progenitor | 2.11e-20 | 61 |
myeloid leukocyte | 5.39e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.36e-18 | 66 |
granulocyte monocyte progenitor cell | 2.91e-18 | 67 |
mesenchymal cell | 1.52e-11 | 354 |
myeloid cell | 2.20e-11 | 108 |
common myeloid progenitor | 2.20e-11 | 108 |
connective tissue cell | 3.52e-11 | 361 |
motile cell | 6.75e-10 | 386 |
nongranular leukocyte | 3.79e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-08 | 120 |
stem cell | 1.38e-08 | 441 |
multi fate stem cell | 2.51e-08 | 427 |
leukocyte | 2.94e-08 | 136 |
somatic stem cell | 4.14e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-15 | 76 |
bone element | 2.87e-14 | 82 |
skeletal element | 1.11e-12 | 90 |
immune system | 3.71e-12 | 93 |
hematopoietic system | 2.36e-11 | 98 |
blood island | 2.36e-11 | 98 |
skeletal system | 4.69e-11 | 100 |
connective tissue | 1.10e-10 | 371 |
hemolymphoid system | 5.69e-10 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.