FFCP PHASE1:Mm9::chr2:131388491..131388509,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11550|HGNC=|UniProt=E9QJT7,A2ANQ2|association_with_transcript=-470bp_to_ENSMUST00000028810,NM_013460,uc008mlu.1_5end|description=CAGE_peak_2_at_Adra1d_5end|id=chr2:131388491..131388509,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.09e-08!33;UBERON:0004535!6.28e-08!23;UBERON:0001009!6.28e-08!23;UBERON:0000025!8.57e-08!114;UBERON:0004111!2.81e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.26e-10,23;UBERON:0001009,1.26e-10,23;UBERON:0010314,3.60e-10,92;UBERON:0002369,1.14e-08,7;UBERON:0006858,1.14e-08,7;UBERON:0004872,1.75e-08,33;UBERON:0000947,2.09e-07,4;UBERON:0001637,2.09e-07,4;UBERON:0004573,2.09e-07,4;UBERON:0003509,2.09e-07,4;UBERON:0004571,2.09e-07,4;UBERON:0010191,2.09e-07,4;UBERON:0004572,2.09e-07,4;UBERON:0000025,3.39e-07,114;UBERON:0007100,9.08e-07,18;UBERON:0000948,9.08e-07,18;UBERON:0005498,9.08e-07,18;UBERON:0004140,9.08e-07,18;UBERON:0009881,9.08e-07,18;UBERON:0004141,9.08e-07,18;UBERON:0003084,9.08e-07,18;UBERON:0007005,9.08e-07,18;UBERON:0004139,9.08e-07,18;UBERON:0004291,9.08e-07,18|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.92616169317078,2.0190142737785,0,1.74420125104357,2.41654801007919,2.3331587888914,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0.988866362566974,0.7104801149461,2.09720077362883,1.92109152660777,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0,0,1.10115880999389,1.27687338085188,1.22885226604995,0,0.182975287204819,0,0.837548997004143,0,0.61119299110724,0.589257170947335,0.569486723196412,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,4.4311883870295,1.81850203222008,4.59341446863442,0.281686839553361,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,0.11418387971906,0,3.11728492036132,0.520455980298408,2.13125834818499,2.99800146432876,1.95939432718409,1.64624189989987,3.01599819191221,0,4.19338135067744,0,0.161766849947409,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.49790639404823,0,0.125654352112864,1.56441888173049,1.79000820131231,2.28566849015516,1.94689515681309,0.407357455401265,0.497627882440372,0.252722758433675,0.631325567659422,0,0,0.360124259610698,1.20563854268572,0.816437989815934,0.896796041993948,0.468508622798644,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,1.42046841351126,0.590292695242212,0.925602677324269,1.62773761325285,1.3413670069981,1.28441876603886,1.15191894939436,1.47750717671186,1.78351381000883,3.21639972335731,4.17145219052996,3.08674763148855,2.52347938276953,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.407302655690628,0,0.420814919341911,0.316182685621286,0.442830443938806,0.627994911365499,0.493588655687202,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,1.67506257441816,0.238043640886014,1.75620283072019,1.41871629695572,1.32878813789265,0.797273843287435,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,1.60550589987792,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,2.57057053137446,0.141940085208269,1.06839362200353,2.93196526836437,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0,0,0,1.8542530201051,0.170870880797853,1.65109494370578,1.11116716421827,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0.93841237725591,0,0,0,0,1.38097570952153,0,0.515559547031063,1.37016503954128,1.5107877947794,0,0.45032120322422,0.906284817968409,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0.505394423527595,1.01391719956096,0.565879024158229,0.468207537349412,0.128050304809739,0.516919220600519,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.423073039458382,0,0.263069711437843,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.464810523557898,0.578719832943424,0.749431733813838,0.467863216890817,0,0,0.220591419119515,0.463735671240843|short_description=p2@Adra1d}} | ||
|EntrezGene=11550 | |||
|HGNC= | |||
|UniProt=E9QJT7,A2ANQ2 | |||
|association_with_transcript=-470bp_to_ENSMUST00000028810,NM_013460,uc008mlu.1_5end | |||
|description=CAGE_peak_2_at_Adra1d_5end | |||
|id=chr2:131388491..131388509,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.09e-08!33;UBERON:0004535!6.28e-08!23;UBERON:0001009!6.28e-08!23;UBERON:0000025!8.57e-08!114;UBERON:0004111!2.81e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.26e-10,23;UBERON:0001009,1.26e-10,23;UBERON:0010314,3.60e-10,92;UBERON:0002369,1.14e-08,7;UBERON:0006858,1.14e-08,7;UBERON:0004872,1.75e-08,33;UBERON:0000947,2.09e-07,4;UBERON:0001637,2.09e-07,4;UBERON:0004573,2.09e-07,4;UBERON:0003509,2.09e-07,4;UBERON:0004571,2.09e-07,4;UBERON:0010191,2.09e-07,4;UBERON:0004572,2.09e-07,4;UBERON:0000025,3.39e-07,114;UBERON:0007100,9.08e-07,18;UBERON:0000948,9.08e-07,18;UBERON:0005498,9.08e-07,18;UBERON:0004140,9.08e-07,18;UBERON:0009881,9.08e-07,18;UBERON:0004141,9.08e-07,18;UBERON:0003084,9.08e-07,18;UBERON:0007005,9.08e-07,18;UBERON:0004139,9.08e-07,18;UBERON:0004291,9.08e-07,18 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.92616169317078,2.0190142737785,0,1.74420125104357,2.41654801007919,2.3331587888914,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0.988866362566974,0.7104801149461,2.09720077362883,1.92109152660777,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0,0,0,1.10115880999389,1.27687338085188,1.22885226604995,0,0.182975287204819,0,0.837548997004143,0,0.61119299110724,0.589257170947335,0.569486723196412,0.186399445825301,0.151452386666368,0.151143120213571,0.289864488701678,0,0,0,0,0,0.421333260395256,4.4311883870295,1.81850203222008,4.59341446863442,0.281686839553361,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,0.11418387971906,0,3.11728492036132,0.520455980298408,2.13125834818499,2.99800146432876,1.95939432718409,1.64624189989987,3.01599819191221,0,4.19338135067744,0,0.161766849947409,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.49790639404823,0,0.125654352112864,1.56441888173049,1.79000820131231,2.28566849015516,1.94689515681309,0.407357455401265,0.497627882440372,0.252722758433675,0.631325567659422,0,0,0.360124259610698,1.20563854268572,0.816437989815934,0.896796041993948,0.468508622798644,0,0,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,1.42046841351126,0.590292695242212,0.925602677324269,1.62773761325285,1.3413670069981,1.28441876603886,1.15191894939436,1.47750717671186,1.78351381000883,3.21639972335731,4.17145219052996,3.08674763148855,2.52347938276953,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.569003702859245,0.114248512609729,1.1270773567308,0.407302655690628,0,0.420814919341911,0.316182685621286,0.442830443938806,0.627994911365499,0.493588655687202,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,1.67506257441816,0.238043640886014,1.75620283072019,1.41871629695572,1.32878813789265,0.797273843287435,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,1.60550589987792,1.05490517932983,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,2.57057053137446,0.141940085208269,1.06839362200353,2.93196526836437,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0,0,0,1.8542530201051,0.170870880797853,1.65109494370578,1.11116716421827,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.453460767230423,0,0,0,0,0.93841237725591,0,0,0,0,1.38097570952153,0,0.515559547031063,1.37016503954128,1.5107877947794,0,0.45032120322422,0.906284817968409,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0,0.666740183404846,0.206035057238894,0,0.505394423527595,1.01391719956096,0.565879024158229,0.468207537349412,0.128050304809739,0.516919220600519,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0,0.290692833264657,0.188218760830661,0.423073039458382,0,0.263069711437843,0.543216455383447,0,0.474540072496697,0.394017929502254,0,0.464810523557898,0.578719832943424,0.749431733813838,0.467863216890817,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Adra1d | |||
}} |
Revision as of 22:06, 13 September 2013
Short description: | p2@Adra1d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Adra1d_5end |
Coexpression cluster: | NA |
Association with transcript: | -470bp_to_ENSMUST00000028810, NM_013460, uc008mlu.1_5end |
EntrezGene: | Adra1d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.26e-10 | 23 |
circulatory system | 1.26e-10 | 23 |
structure with developmental contribution from neural crest | 3.60e-10 | 92 |
adrenal gland | 1.14e-08 | 7 |
adrenal/interrenal gland | 1.14e-08 | 7 |
splanchnic layer of lateral plate mesoderm | 1.75e-08 | 33 |
aorta | 2.09e-07 | 4 |
artery | 2.09e-07 | 4 |
systemic artery | 2.09e-07 | 4 |
arterial blood vessel | 2.09e-07 | 4 |
systemic arterial system | 2.09e-07 | 4 |
aortic system | 2.09e-07 | 4 |
arterial system | 2.09e-07 | 4 |
tube | 3.39e-07 | 114 |
primary circulatory organ | 9.08e-07 | 18 |
heart | 9.08e-07 | 18 |
primitive heart tube | 9.08e-07 | 18 |
primary heart field | 9.08e-07 | 18 |
anterior lateral plate mesoderm | 9.08e-07 | 18 |
heart tube | 9.08e-07 | 18 |
heart primordium | 9.08e-07 | 18 |
cardiac mesoderm | 9.08e-07 | 18 |
cardiogenic plate | 9.08e-07 | 18 |
heart rudiment | 9.08e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.