FFCP PHASE1:Hg19::chr7:107443661..107443675,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1811|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3018|TSSclassifier=W|UniProt=F8WBL6,G5E9U3,C9JFJ2|association_with_transcript=0bp_to_ENST00000379083,ENST00000422236,ENST00000453332_5end|coexpression_cluster_id=C201|description=CAGE_peak_1_at_SLC26A3_5end|id=chr7:107443661..107443675,-|ontology_enrichment_celltype=CL:0002563!7.44e-08!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006242;9.36e-15;1!UBERON:0001045;1.07e-14;1!UBERON:0000358;2.41e-14;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3493;8.89e-08;2|ontology_enrichment_disease_v019_2=DOID:3493,9.19e-08,2|ontology_enrichment_uberon=UBERON:0000160!3.56e-34!27;UBERON:0000059!7.45e-31!11;UBERON:0005409!4.32e-26!35;UBERON:0004907!1.44e-22!5;UBERON:0001155!9.03e-20!9;UBERON:0001052!3.61e-16!4;UBERON:0004921!2.88e-09!129;UBERON:0004185!2.88e-09!129;UBERON:0001046!4.76e-09!19;UBERON:0001154!1.52e-08!1;UBERON:0001153!1.52e-08!1;UBERON:0001007!1.96e-08!155;UBERON:0001555!1.96e-08!155;UBERON:0007026!1.96e-08!155;UBERON:0002135!3.33e-08!1;UBERON:0001000!3.57e-08!1;UBERON:0005352!3.57e-08!1;UBERON:0006834!3.83e-08!1;UBERON:0002363!6.68e-08!1;UBERON:0007647!6.68e-08!1;UBERON:0010115!6.68e-08!1;UBERON:0001242!7.44e-08!4;UBERON:0001262!7.44e-08!4;UBERON:0004786!7.44e-08!4;UBERON:0004808!7.44e-08!4;UBERON:0001277!7.44e-08!4;UBERON:0002108!9.78e-08!14;UBERON:0004119!1.74e-07!169;UBERON:0000925!1.74e-07!169;UBERON:0006595!1.74e-07!169|ontology_enrichment_uberon_v019=UBERON:0000160;1.67e-72;17!UBERON:0005409;1.44e-56;22!UBERON:0000059;4.14e-43;11!UBERON:0004921;8.80e-34;33!UBERON:0002108;8.01e-25;4!UBERON:0001155;2.92e-24;9!UBERON:0004907;3.83e-24;5!UBERON:0001154;1.07e-14;1!UBERON:0001153;1.07e-14;1!UBERON:0009854;1.07e-14;1!UBERON:0001052;5.93e-14;4!UBERON:0001555;1.71e-12;54!UBERON:0001007;4.37e-11;81|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.60e-72,17;UBERON:0005409,5.90e-50,25;UBERON:0000059,4.00e-43,11;UBERON:0002108,8.01e-25,4;UBERON:0001155,2.92e-24,9;UBERON:0004907,3.68e-24,5;UBERON:0001154,1.07e-14,1;UBERON:0001153,1.07e-14,1;UBERON:0001045,1.07e-14,1;UBERON:0001052,5.74e-14,4;UBERON:0004921,2.77e-12,118;UBERON:0001007,9.17e-12,145;UBERON:0001555,9.17e-12,145;UBERON:0007026,9.17e-12,145;UBERON:0001046,2.51e-11,19;UBERON:0004119,1.56e-10,160;UBERON:0000925,1.56e-10,160;UBERON:0006595,1.56e-10,160;UBERON:0011216,5.08e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,29.271248373261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7332146867014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,122.67005849583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,213.981315181879,182.134125312375,284.740047539069,0,0,0,0,0,0,0,0,0,0.394584402849391,118.570901727691,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.203643322807,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96190514319652,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95068679971631,0,0,0,0,0,0,0,0,0,0,268.488896057539,119.770639156169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.436575163068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,4.69281884806909,0.366724332548599,0,0,0,0|short_description=p1@SLC26A3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3018 | |||
|TSSclassifier=W | |||
|UniProt=F8WBL6,G5E9U3,C9JFJ2 | |||
|association_with_transcript=0bp_to_ENST00000379083,ENST00000422236,ENST00000453332_5end | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_1_at_SLC26A3_5end | |||
|id=chr7:107443661..107443675,- | |||
|ontology_enrichment_celltype=CL:0002563!7.44e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;9.36e-15;1!UBERON:0001045;1.07e-14;1!UBERON:0000358;2.41e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;8.89e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!3.56e-34!27;UBERON:0000059!7.45e-31!11;UBERON:0005409!4.32e-26!35;UBERON:0004907!1.44e-22!5;UBERON:0001155!9.03e-20!9;UBERON:0001052!3.61e-16!4;UBERON:0004921!2.88e-09!129;UBERON:0004185!2.88e-09!129;UBERON:0001046!4.76e-09!19;UBERON:0001154!1.52e-08!1;UBERON:0001153!1.52e-08!1;UBERON:0001007!1.96e-08!155;UBERON:0001555!1.96e-08!155;UBERON:0007026!1.96e-08!155;UBERON:0002135!3.33e-08!1;UBERON:0001000!3.57e-08!1;UBERON:0005352!3.57e-08!1;UBERON:0006834!3.83e-08!1;UBERON:0002363!6.68e-08!1;UBERON:0007647!6.68e-08!1;UBERON:0010115!6.68e-08!1;UBERON:0001242!7.44e-08!4;UBERON:0001262!7.44e-08!4;UBERON:0004786!7.44e-08!4;UBERON:0004808!7.44e-08!4;UBERON:0001277!7.44e-08!4;UBERON:0002108!9.78e-08!14;UBERON:0004119!1.74e-07!169;UBERON:0000925!1.74e-07!169;UBERON:0006595!1.74e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.67e-72;17!UBERON:0005409;1.44e-56;22!UBERON:0000059;4.14e-43;11!UBERON:0004921;8.80e-34;33!UBERON:0002108;8.01e-25;4!UBERON:0001155;2.92e-24;9!UBERON:0004907;3.83e-24;5!UBERON:0001154;1.07e-14;1!UBERON:0001153;1.07e-14;1!UBERON:0009854;1.07e-14;1!UBERON:0001052;5.93e-14;4!UBERON:0001555;1.71e-12;54!UBERON:0001007;4.37e-11;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.60e-72,17;UBERON:0005409,5.90e-50,25;UBERON:0000059,4.00e-43,11;UBERON:0002108,8.01e-25,4;UBERON:0001155,2.92e-24,9;UBERON:0004907,3.68e-24,5;UBERON:0001154,1.07e-14,1;UBERON:0001153,1.07e-14,1;UBERON:0001045,1.07e-14,1;UBERON:0001052,5.74e-14,4;UBERON:0004921,2.77e-12,118;UBERON:0001007,9.17e-12,145;UBERON:0001555,9.17e-12,145;UBERON:0007026,9.17e-12,145;UBERON:0001046,2.51e-11,19;UBERON:0004119,1.56e-10,160;UBERON:0000925,1.56e-10,160;UBERON:0006595,1.56e-10,160;UBERON:0011216,5.08e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,29.271248373261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7332146867014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,122.67005849583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,213.981315181879,182.134125312375,284.740047539069,0,0,0,0,0,0,0,0,0,0.394584402849391,118.570901727691,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.203643322807,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96190514319652,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95068679971631,0,0,0,0,0,0,0,0,0,0,268.488896057539,119.770639156169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,208.436575163068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,4.69281884806909,0.366724332548599,0,0,0,0 | |||
|short_description=p1@SLC26A3 | |||
}} |
Revision as of 22:40, 13 September 2013
Short description: | p1@SLC26A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC26A3_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000379083, ENST00000422236, ENST00000453332_5end |
EntrezGene: | SLC26A3 |
HGNC: | 3018 |
UniProt: | F8WBL6G5E9U3C9JFJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.60e-72 | 17 |
gastrointestinal system | 5.90e-50 | 25 |
large intestine | 4.00e-43 | 11 |
small intestine | 8.01e-25 | 4 |
colon | 2.92e-24 | 9 |
lower digestive tract | 3.68e-24 | 5 |
vermiform appendix | 1.07e-14 | 1 |
caecum | 1.07e-14 | 1 |
midgut | 1.07e-14 | 1 |
rectum | 5.74e-14 | 4 |
subdivision of digestive tract | 2.77e-12 | 118 |
digestive system | 9.17e-12 | 145 |
digestive tract | 9.17e-12 | 145 |
primitive gut | 9.17e-12 | 145 |
hindgut | 2.51e-11 | 19 |
endoderm-derived structure | 1.56e-10 | 160 |
endoderm | 1.56e-10 | 160 |
presumptive endoderm | 1.56e-10 | 160 |
organ system subdivision | 5.08e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.19e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.