FFCP PHASE1:Mm9::chr2:172376261..172376267,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21420|HGNC=|MCL_coexpression_id=161|UniProt=|association_with_transcript=0bp_to_ENSMUST00000122982_5end|description=CAGE_peak_4_at_Tfap2c_5end|id=chr2:172376261..172376267,+|ontology_enrichment_celltype=CL:0002609!6.65e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,1.74e-10,6;CL:0000349,2.41e-10,3;CL:0000351,2.41e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001444!2.88e-09!11;UBERON:0000014!4.02e-09!5;UBERON:0001003!4.02e-09!5;UBERON:0002097!4.02e-09!5;UBERON:0002199!4.02e-09!5;UBERON:0007029!4.02e-09!5;UBERON:0007376!4.02e-09!5;UBERON:0002416!4.02e-09!5;UBERON:0007383!4.02e-09!5;UBERON:0005085!8.60e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.51e-15,2;UBERON:0000076,2.51e-15,2;UBERON:0005333,2.51e-15,2;UBERON:0008425,2.51e-15,2;UBERON:0005311,2.51e-15,2;UBERON:0000358,2.41e-10,3;UBERON:0000307,2.41e-10,3;UBERON:0007010,2.41e-10,3;UBERON:0005085,8.47e-09,13;UBERON:0001044,5.62e-08,1;UBERON:0001736,5.62e-08,1;UBERON:0003293,5.62e-08,1;UBERON:0003294,5.62e-08,1;UBERON:0001829,5.62e-08,1;UBERON:0010047,5.62e-08,1;UBERON:0000167,5.62e-08,1;UBERON:0006298,5.62e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14058573539325,1.08004750665353,1.26194976810829,0,0,0.122490799214954,0.383381884072945,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,1.05220927943237,0,0,0.540186389416048,0,0.612328492361951,0.640568601424249,0.749613796477831,1.55222022443409,0.431135985865684,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,3.03530420935206,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.27099242518292,0.220528398054962,1.15420377059036,1.29171541356724,0.965006798850494,0.477489376012546,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0.221985953374065,2.24284641523689,2.18250001273302,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0|short_description=p4@Tfap2c}} | ||
|EntrezGene=21420 | |||
|HGNC= | |||
|MCL_coexpression_id=161 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000122982_5end | |||
|description=CAGE_peak_4_at_Tfap2c_5end | |||
|id=chr2:172376261..172376267,+ | |||
|ontology_enrichment_celltype=CL:0002609!6.65e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.74e-10,6;CL:0000349,2.41e-10,3;CL:0000351,2.41e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001444!2.88e-09!11;UBERON:0000014!4.02e-09!5;UBERON:0001003!4.02e-09!5;UBERON:0002097!4.02e-09!5;UBERON:0002199!4.02e-09!5;UBERON:0007029!4.02e-09!5;UBERON:0007376!4.02e-09!5;UBERON:0002416!4.02e-09!5;UBERON:0007383!4.02e-09!5;UBERON:0005085!8.60e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.51e-15,2;UBERON:0000076,2.51e-15,2;UBERON:0005333,2.51e-15,2;UBERON:0008425,2.51e-15,2;UBERON:0005311,2.51e-15,2;UBERON:0000358,2.41e-10,3;UBERON:0000307,2.41e-10,3;UBERON:0007010,2.41e-10,3;UBERON:0005085,8.47e-09,13;UBERON:0001044,5.62e-08,1;UBERON:0001736,5.62e-08,1;UBERON:0003293,5.62e-08,1;UBERON:0003294,5.62e-08,1;UBERON:0001829,5.62e-08,1;UBERON:0010047,5.62e-08,1;UBERON:0000167,5.62e-08,1;UBERON:0006298,5.62e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14058573539325,1.08004750665353,1.26194976810829,0,0,0.122490799214954,0.383381884072945,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,1.05220927943237,0,0,0.540186389416048,0,0.612328492361951,0.640568601424249,0.749613796477831,1.55222022443409,0.431135985865684,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45882136509518,3.03530420935206,0,0,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,1.27099242518292,0.220528398054962,1.15420377059036,1.29171541356724,0.965006798850494,0.477489376012546,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0.221985953374065,2.24284641523689,2.18250001273302,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.377252682772152,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p4@Tfap2c | |||
}} |
Revision as of 23:04, 13 September 2013
Short description: | p4@Tfap2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tfap2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | 0bp_to_ENSMUST00000122982_5end |
EntrezGene: | Tfap2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.74e-10 | 6 |
extraembryonic cell | 2.41e-10 | 3 |
trophoblast cell | 2.41e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 2.51e-15 | 2 |
external ectoderm | 2.51e-15 | 2 |
mammary bud | 2.51e-15 | 2 |
mammary ridge | 2.51e-15 | 2 |
mammary placode | 2.51e-15 | 2 |
blastocyst | 2.41e-10 | 3 |
blastula | 2.41e-10 | 3 |
cleaving embryo | 2.41e-10 | 3 |
ectodermal placode | 8.47e-09 | 13 |
saliva-secreting gland | 5.62e-08 | 1 |
submandibular gland | 5.62e-08 | 1 |
gland of oral region | 5.62e-08 | 1 |
gland of foregut | 5.62e-08 | 1 |
major salivary gland | 5.62e-08 | 1 |
oral gland | 5.62e-08 | 1 |
oral cavity | 5.62e-08 | 1 |
submandibular gland primordium | 5.62e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.