FFCP PHASE1:Mm9::chr2:181327403..181327432,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=269401|HGNC=|MCL_coexpression_id=0|UniProt=D6RE21|association_with_transcript=30bp_to_ENSMUST00000133598_5end|description=CAGE_peak_3_at_Znf512b_5end|id=chr2:181327403..181327432,-|ontology_enrichment_celltype=CL:0000540!2.64e-09!33;CL:0000047!2.64e-09!33;CL:0000031!2.64e-09!33;CL:0000404!2.64e-09!33|ontology_enrichment_celltype_v019_2=CL:0000540,3.31e-10,33;CL:0000047,3.31e-10,33;CL:0000031,3.31e-10,33;CL:0000404,3.31e-10,33;CL:0000393,4.65e-07,39;CL:0000211,4.65e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.32e-07!102;UBERON:0000924!4.32e-07!102;UBERON:0006601!4.32e-07!102;UBERON:0004176!8.52e-07!17;UBERON:0009196!8.52e-07!17;UBERON:0009117!8.52e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004176,5.15e-08,17;UBERON:0009196,5.15e-08,17;UBERON:0009117,5.15e-08,17;UBERON:0000991,3.14e-07,18;UBERON:0005564,3.14e-07,18;UBERON:0000473,7.53e-07,14|phase1_expression=2.08193501236232,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0,0.258246646883153,0.281577444303333,0.234064526321993,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0,0,0,5.27268398936633,0.397163804803541,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.550640256485045,0,0.218025156380447,0.659058548203415,0.972149495371417,0.279972843250725,0,0.335565212115473,1.45072428402269,0.672187598284928,0.514518872071894,0.573066879877513,0,4.04632921719196,1.05798195854407,6.97214543856797,1.35537812827653,1.77858959222228,0,0,0,0,0.384218305321555,2.90330914463737,2.56511282830212,1.47227472945967,2.28520787523043,1.54607978666129,1.5923803897944,1.72521847832825,0.919218786610021,2.20231761998777,1.14918604276669,0.46081959976873,3.82470234417562,1.82975287204819,1.56274011167028,0.279182999001381,0.56276261003168,0.916789486660861,1.47314292736834,1.99320353118744,4.47358669980721,0.151452386666368,0.151143120213571,0,0.860423876981386,2.03991400112325,1.61910957491345,1.94932925234301,1.79210754838934,0.561777680527007,0.170430322578058,0,0.70667914902068,2.25349471642689,0,2.54805239706646,7.11066703153331,0.865964164044856,0.506719730950197,0,0.5709193985953,0.517875767294343,1.03909497345377,1.38788261412909,0.913396434936424,1.38369298353635,0.753613202763113,1.99900802130698,1.88499886994513,1.23597483867187,0.433798070759735,0,0.970601099684455,1.32504911076236,0,0,0.292780797011547,1.8850203613211,0.766371165625774,0.359445373517761,0,0.127070227073065,1.49790639404823,1.37250180845588,5.27748278874031,1.39059456153821,2.30143911597297,0.62336413367868,0.973447578406546,3.05518091550949,1.11966273549084,0.505445516867349,0.631325567659422,1.30120442962704,1.37941262660084,1.26043490863744,1.05493372485001,2.85753296435577,0.512454881139399,1.78033276663485,0.776110112217047,1.5089759505299,0.756424320671277,1.93546236580344,1.09597866213787,1.94633074457919,1.74126083261083,0.61734640922383,0.995171334092466,0,0,0,2.07125772535502,0.938104239924385,0.180062061461015,0.473489471170421,0.196764231747404,0.771335564436891,0.930135779001631,1.07309360559848,1.05088808130453,1.15191894939436,0.985004784474571,0.972825714550269,0.730999937126662,0,0.671032093801859,1.68231958851302,3.19004298375782,0,0,1.06644125267617,1.16118335930219,0.902072229254653,1.4117846723634,0.889512175379481,0.951128130562796,0.474529061544512,1.15289268306808,1.00534083520108,0.994782360205754,1.55971269695296,0,0.216138049874694,0.995706366271836,0.569003702859245,1.25673363870702,2.25415471346161,0.203651327845314,0.775809948670503,1.68325967736765,1.89709611372772,0.738050739898011,0.784993639206874,0.863780147452604,0.592905254174298,0.667380422864376,0.786235980452812,0.449724224769707,1.42002084971952,0.241177159752417,0.50925170356284,0.287696137450811,1.29708181420028,0.549122826376163,2.87536413054709,2.23284568601102,2.80833905803104,1.01031551178845,0.538192240565737,0.964887042726734,0.369506380333209,1.13694847062291,1.46668478797823,1.35796068620151,0.938760993154008,0.837531287209079,0.714130922658041,2.73187107000918,1.10344600874334,1.55025282754142,2.23236676120482,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.491764273019036,1.10374698521893,0.642202359951168,1.28932855251423,0.655739781506702,1.51482556322624,1.26203287766503,3.51394869866975,3.23135096599198,2.62865677747807,1.11399337041197,2.54768877709949,4.85772842009873,1.75353514746787,2.76701444562566,0.642642632843614,1.13552068166615,2.13678724400706,3.58351310577867,1.15479086080775,0,0.728341908464944,0,0.188605079755898,0.885905678642318,0.614870295887855,1.03371317267288,1.81766864738753,0.712994756769443,0.632073515871632,2.10837217149998,0,0.680879211507576,1.44048875225048,2.32845630808958,1.71469628025274,2.30542303734956,1.78368817602071,1.31639216481697,2.13125464380219,0.704015124191131,0.21183207086382,0.220528398054962,0.1648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| ||
|EntrezGene=269401 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=D6RE21 | |||
|association_with_transcript=30bp_to_ENSMUST00000133598_5end | |||
|description=CAGE_peak_3_at_Znf512b_5end | |||
|id=chr2:181327403..181327432,- | |||
|ontology_enrichment_celltype=CL:0000540!2.64e-09!33;CL:0000047!2.64e-09!33;CL:0000031!2.64e-09!33;CL:0000404!2.64e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.31e-10,33;CL:0000047,3.31e-10,33;CL:0000031,3.31e-10,33;CL:0000404,3.31e-10,33;CL:0000393,4.65e-07,39;CL:0000211,4.65e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.32e-07!102;UBERON:0000924!4.32e-07!102;UBERON:0006601!4.32e-07!102;UBERON:0004176!8.52e-07!17;UBERON:0009196!8.52e-07!17;UBERON:0009117!8.52e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,5.15e-08,17;UBERON:0009196,5.15e-08,17;UBERON:0009117,5.15e-08,17;UBERON:0000991,3.14e-07,18;UBERON:0005564,3.14e-07,18;UBERON:0000473,7.53e-07,14 | |||
|phase1_expression=2.08193501236232,0,0,0.30246421130683,0.500895729946347,0.33575854382378,0,0.258246646883153,0.281577444303333,0.234064526321993,0.171217968225505,0.0797721589953364,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0,0,0,5.27268398936633,0.397163804803541,0,0,0,0,0.430761996159075,0,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.550640256485045,0,0.218025156380447,0.659058548203415,0.972149495371417,0.279972843250725,0,0.335565212115473,1.45072428402269,0.672187598284928,0.514518872071894,0.573066879877513,0,4.04632921719196,1.05798195854407,6.97214543856797,1.35537812827653,1.77858959222228,0,0,0,0,0.384218305321555,2.90330914463737,2.56511282830212,1.47227472945967,2.28520787523043,1.54607978666129,1.5923803897944,1.72521847832825,0.919218786610021,2.20231761998777,1.14918604276669,0.46081959976873,3.82470234417562,1.82975287204819,1.56274011167028,0.279182999001381,0.56276261003168,0.916789486660861,1.47314292736834,1.99320353118744,4.47358669980721,0.151452386666368,0.151143120213571,0,0.860423876981386,2.03991400112325,1.61910957491345,1.94932925234301,1.79210754838934,0.561777680527007,0.170430322578058,0,0.70667914902068,2.25349471642689,0,2.54805239706646,7.11066703153331,0.865964164044856,0.506719730950197,0,0.5709193985953,0.517875767294343,1.03909497345377,1.38788261412909,0.913396434936424,1.38369298353635,0.753613202763113,1.99900802130698,1.88499886994513,1.23597483867187,0.433798070759735,0,0.970601099684455,1.32504911076236,0,0,0.292780797011547,1.8850203613211,0.766371165625774,0.359445373517761,0,0.127070227073065,1.49790639404823,1.37250180845588,5.27748278874031,1.39059456153821,2.30143911597297,0.62336413367868,0.973447578406546,3.05518091550949,1.11966273549084,0.505445516867349,0.631325567659422,1.30120442962704,1.37941262660084,1.26043490863744,1.05493372485001,2.85753296435577,0.512454881139399,1.78033276663485,0.776110112217047,1.5089759505299,0.756424320671277,1.93546236580344,1.09597866213787,1.94633074457919,1.74126083261083,0.61734640922383,0.995171334092466,0,0,0,2.07125772535502,0.938104239924385,0.180062061461015,0.473489471170421,0.196764231747404,0.771335564436891,0.930135779001631,1.07309360559848,1.05088808130453,1.15191894939436,0.985004784474571,0.972825714550269,0.730999937126662,0,0.671032093801859,1.68231958851302,3.19004298375782,0,0,1.06644125267617,1.16118335930219,0.902072229254653,1.4117846723634,0.889512175379481,0.951128130562796,0.474529061544512,1.15289268306808,1.00534083520108,0.994782360205754,1.55971269695296,0,0.216138049874694,0.995706366271836,0.569003702859245,1.25673363870702,2.25415471346161,0.203651327845314,0.775809948670503,1.68325967736765,1.89709611372772,0.738050739898011,0.784993639206874,0.863780147452604,0.592905254174298,0.667380422864376,0.786235980452812,0.449724224769707,1.42002084971952,0.241177159752417,0.50925170356284,0.287696137450811,1.29708181420028,0.549122826376163,2.87536413054709,2.23284568601102,2.80833905803104,1.01031551178845,0.538192240565737,0.964887042726734,0.369506380333209,1.13694847062291,1.46668478797823,1.35796068620151,0.938760993154008,0.837531287209079,0.714130922658041,2.73187107000918,1.10344600874334,1.55025282754142,2.23236676120482,0.327726629431476,0.518054945597687,0.433947175744535,0,0,0.491764273019036,1.10374698521893,0.642202359951168,1.28932855251423,0.655739781506702,1.51482556322624,1.26203287766503,3.51394869866975,3.23135096599198,2.62865677747807,1.11399337041197,2.54768877709949,4.85772842009873,1.75353514746787,2.76701444562566,0.642642632843614,1.13552068166615,2.13678724400706,3.58351310577867,1.15479086080775,0,0.728341908464944,0,0.188605079755898,0.885905678642318,0.614870295887855,1.03371317267288,1.81766864738753,0.712994756769443,0.632073515871632,2.10837217149998,0,0.680879211507576,1.44048875225048,2.32845630808958,1.71469628025274,2.30542303734956,1.78368817602071,1.31639216481697,2.13125464380219,0.704015124191131,0.21183207086382,0.220528398054962,0.16488625294148,1.77610869365496,1.74907482291652,1.19372344003136,0.820704498725306,0.582961673259701,0.370850604021019,0.341741761595705,0.82554747185289,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0.339956859987711,0.979660166265606,0.967399816630967,0,1.26534397432454,0.406638934253697,1.18805874903981,0.627264888043406,0.436725127492355,0.674321731924103,2.31429676030941,0.523511883968059,1.03691978633434,0.621339313086926,27.0572610568411,1.19613236835183,1.15820943319968,2.72231663681667,1.80823752868824,1.35164900392623,2.34714477291508,2.99470085141085,1.67774951081137,8.93861247056222,18.1458903942455,0.632022241256357,1.82452693761148,0.616265742988964,0.909445760844565,1.25318686967237,0.79472541912506,0.841368146639782,1.47689527174577,0.504832249740738,1.21930890648,0.806609481094724,0.779663045918019,0.962118416403295,0.701261413089414,0.226730383615211,0.887943813496259,0.807424709485281,0.33576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| |||
|short_description=p3@Znf512b | |||
}} | |||
Revision as of 23:16, 13 September 2013
| Short description: | p3@Znf512b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Znf512b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 30bp_to_ENSMUST00000133598_5end |
| EntrezGene: | Znf512b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 3.31e-10 | 33 |
| neuronal stem cell | 3.31e-10 | 33 |
| neuroblast | 3.31e-10 | 33 |
| electrically signaling cell | 3.31e-10 | 33 |
| electrically responsive cell | 4.65e-07 | 39 |
| electrically active cell | 4.65e-07 | 39 |
| Ontology term | p-value | n |
|---|---|---|
| external genitalia | 5.15e-08 | 17 |
| indifferent external genitalia | 5.15e-08 | 17 |
| indifferent gonad | 5.15e-08 | 17 |
| gonad | 3.14e-07 | 18 |
| gonad primordium | 3.14e-07 | 18 |
| testis | 7.53e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
