FFCP PHASE1:Mm9::chr2:22924961..22924975,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74159|HGNC=|MCL_coexpression_id=750|UniProt=Q5XG73|association_with_transcript=114bp_to_ENSMUST00000155602_5end|description=CAGE_peak_3_at_Acbd5_5end|id=chr2:22924961..22924975,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!6.03e-09!25;UBERON:0002330!6.03e-09!25;UBERON:0004119!6.23e-09!130;UBERON:0000925!6.23e-09!130;UBERON:0006595!6.23e-09!130;UBERON:0001007!1.23e-08!128;UBERON:0001555!1.23e-08!128;UBERON:0007026!1.23e-08!128;UBERON:0009854!2.49e-08!23;UBERON:0009856!2.49e-08!23;UBERON:0004921!6.45e-08!126;UBERON:0004185!6.45e-08!126;UBERON:0002107!7.68e-08!22;UBERON:0007499!7.68e-08!22;UBERON:0006925!7.68e-08!22;UBERON:0009497!7.68e-08!22;UBERON:0000015!7.68e-08!22;UBERON:0002423!7.68e-08!22;UBERON:0006235!7.68e-08!22;UBERON:0008835!7.68e-08!22;UBERON:0003894!7.68e-08!22;UBERON:0004161!7.68e-08!22;UBERON:0008836!7.68e-08!22;UBERON:0007023!2.99e-07!51;UBERON:0000160!3.27e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.08e-09,25;UBERON:0002330,1.08e-09,25;UBERON:0009854,5.57e-09,23;UBERON:0009856,5.57e-09,23;UBERON:0002107,2.02e-08,22;UBERON:0007499,2.02e-08,22;UBERON:0006925,2.02e-08,22;UBERON:0009497,2.02e-08,22;UBERON:0000015,2.02e-08,22;UBERON:0002423,2.02e-08,22;UBERON:0006235,2.02e-08,22;UBERON:0008835,2.02e-08,22;UBERON:0003894,2.02e-08,22;UBERON:0004161,2.02e-08,22;UBERON:0008836,2.02e-08,22;UBERON:0004119,4.10e-07,118;UBERON:0000925,4.10e-07,118;UBERON:0006595,4.10e-07,118;UBERON:0001007,7.93e-07,116;UBERON:0001555,7.93e-07,116;UBERON:0007026,7.93e-07,116|phase1_expression=1.44133962394315,31.7567620951819,26.3899558845931,19.660173734944,22.0394121176393,13.766100296775,14.0167584357315,2.1950964985068,5.490760163915,7.49006484230379,0.513653904676515,0.239316476986009,1.54080656938085,1.74840804837995,0,1.01237633694913,0,1.89277299214943,2.33094537129756,0.42438965179803,1.19060606211498,1.09220046320974,0.522399578277871,17.2791816616879,10.3234176480227,19.5238867799107,27.1380057580217,25.4256054569349,12.7315691035771,7.30887376303799,6.87364583031445,0.635030673459631,1.23012957516914,0,0.288851619751275,0.997407872150954,1.22501613757421,5.85944283031671,6.2506827561904,4.71171369576418,4.1176204162171,7.5135003345429,6.79714494243615,0.755380907853464,0.202753862439029,0.917733760808408,0,0.218025156380447,0.439372365468944,0.388859798148567,0.55994568650145,0,5.5368259999053,5.07753499407941,4.03312558970957,0.514518872071894,0,0,0.202316460859598,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.510749352340751,0.614426133024974,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.916789486660861,0.294628585473668,0.284743361598206,0.186399445825301,0.302904773332736,0.453429360640713,6.37701875143691,50.7650087419018,11.5595126730318,106.32152875265,86.42026352054,125.447528387254,26.1226621445058,1.02258193546835,0.259786004602869,0,0.985903938436763,0,0,0,4.76280290224671,3.80039798212648,5.05524445014783,35.2828188331895,2.58937883647172,1.48442139064825,0,0,0.461230994512117,0.60289056221049,1.29347577849275,1.63366568728578,3.46072954828123,8.09756398751505,0,0.323533699894818,1.10420759230197,0.484875253135222,11.1835056730873,0.585561594023094,1.46612694769419,6.13096932500619,4.55297473122497,3.59941638596045,4.3203877204842,1.3481157546434,0.457500602818626,0,0.521472960576829,1.02286182932132,0.83115217823824,1.62241263067758,0.407357455401265,0.746441823660558,1.51633655060205,184.767949468324,0,0,0.360124259610698,0.452114453507145,0.476255494059295,0.2562274405697,0.0937017245597288,66.228062909188,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0.696504333044333,0.823128545631774,0,2.1066395619397,4.37491442095016,1.13665399758237,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.820837320395476,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.420579897128254,0.205809224758569,23.1293148088659,8.46241813323342,0,0,0.257734922644187,1.00841762311671,0.889512175379481,1.33157938278791,8.0669940462567,2.9645811850322,1.00534083520108,0.795825888164603,0.779856348476481,3.59527763461689,7.99710784536369,12.7450414882795,0.189667900953082,0.342745537829186,0,0.814605311381257,0.775809948670503,1.68325967736765,1.39120381673366,3.39503340353085,4.08196692387575,6.29325536001183,103.165514226328,0,0.393117990226406,0.449724224769707,1.01430060694251,0.964708639009667,3.56476192493988,6.61701116136864,20.5911738004295,20.5921059891061,77.6348315247715,29.7712758134803,34.9482193888308,82.8458719666527,86.4695533175617,97.9360348367635,1.66277871149944,0.189491411770485,0,0,0,0,0.714130922658041,0.780534591431195,1.57635144106191,1.10732344824387,0.637819074629948,0.491589944147214,1.38147985492716,2.02508682014116,0,1.08781136763742,5.901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| ||
|EntrezGene=74159 | |||
|HGNC= | |||
|MCL_coexpression_id=750 | |||
|UniProt=Q5XG73 | |||
|association_with_transcript=114bp_to_ENSMUST00000155602_5end | |||
|description=CAGE_peak_3_at_Acbd5_5end | |||
|id=chr2:22924961..22924975,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!6.03e-09!25;UBERON:0002330!6.03e-09!25;UBERON:0004119!6.23e-09!130;UBERON:0000925!6.23e-09!130;UBERON:0006595!6.23e-09!130;UBERON:0001007!1.23e-08!128;UBERON:0001555!1.23e-08!128;UBERON:0007026!1.23e-08!128;UBERON:0009854!2.49e-08!23;UBERON:0009856!2.49e-08!23;UBERON:0004921!6.45e-08!126;UBERON:0004185!6.45e-08!126;UBERON:0002107!7.68e-08!22;UBERON:0007499!7.68e-08!22;UBERON:0006925!7.68e-08!22;UBERON:0009497!7.68e-08!22;UBERON:0000015!7.68e-08!22;UBERON:0002423!7.68e-08!22;UBERON:0006235!7.68e-08!22;UBERON:0008835!7.68e-08!22;UBERON:0003894!7.68e-08!22;UBERON:0004161!7.68e-08!22;UBERON:0008836!7.68e-08!22;UBERON:0007023!2.99e-07!51;UBERON:0000160!3.27e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.08e-09,25;UBERON:0002330,1.08e-09,25;UBERON:0009854,5.57e-09,23;UBERON:0009856,5.57e-09,23;UBERON:0002107,2.02e-08,22;UBERON:0007499,2.02e-08,22;UBERON:0006925,2.02e-08,22;UBERON:0009497,2.02e-08,22;UBERON:0000015,2.02e-08,22;UBERON:0002423,2.02e-08,22;UBERON:0006235,2.02e-08,22;UBERON:0008835,2.02e-08,22;UBERON:0003894,2.02e-08,22;UBERON:0004161,2.02e-08,22;UBERON:0008836,2.02e-08,22;UBERON:0004119,4.10e-07,118;UBERON:0000925,4.10e-07,118;UBERON:0006595,4.10e-07,118;UBERON:0001007,7.93e-07,116;UBERON:0001555,7.93e-07,116;UBERON:0007026,7.93e-07,116 | |||
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| |||
|short_description=p3@Acbd5 | |||
}} |
Revision as of 23:22, 13 September 2013
Short description: | p3@Acbd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Acbd5_5end |
Coexpression cluster: | MCL_coexpression_mm9:750 |
Association with transcript: | 114bp_to_ENSMUST00000155602_5end |
EntrezGene: | Acbd5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.08e-09 | 25 |
exocrine system | 1.08e-09 | 25 |
digestive tract diverticulum | 5.57e-09 | 23 |
sac | 5.57e-09 | 23 |
liver | 2.02e-08 | 22 |
epithelial sac | 2.02e-08 | 22 |
digestive gland | 2.02e-08 | 22 |
epithelium of foregut-midgut junction | 2.02e-08 | 22 |
anatomical boundary | 2.02e-08 | 22 |
hepatobiliary system | 2.02e-08 | 22 |
foregut-midgut junction | 2.02e-08 | 22 |
hepatic diverticulum | 2.02e-08 | 22 |
liver primordium | 2.02e-08 | 22 |
septum transversum | 2.02e-08 | 22 |
liver bud | 2.02e-08 | 22 |
endoderm-derived structure | 4.10e-07 | 118 |
endoderm | 4.10e-07 | 118 |
presumptive endoderm | 4.10e-07 | 118 |
digestive system | 7.93e-07 | 116 |
digestive tract | 7.93e-07 | 116 |
primitive gut | 7.93e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.