FFCP PHASE1:Hg19::chr7:142494446..142494458,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C861|description=CAGE_peak_at_chr7:142494446..142494458,+|id=chr7:142494446..142494458,+|ontology_enrichment_celltype=CL:0000542!3.28e-31!53;CL:0000051!3.28e-31!53;CL:0000838!3.45e-30!52;CL:0000084!5.31e-19!25;CL:0000827!5.31e-19!25;CL:0000791!2.14e-17!18;CL:0000789!2.14e-17!18;CL:0002420!2.14e-17!18;CL:0002419!2.14e-17!18;CL:0000790!2.14e-17!18;CL:0000236!6.43e-13!14;CL:0000625!3.21e-11!11;CL:0002087!5.05e-11!119;CL:0000945!4.06e-10!24;CL:0000826!4.06e-10!24;CL:0000738!1.23e-09!140;CL:0002031!7.08e-08!124;CL:0000037!2.08e-07!172;CL:0000566!2.08e-07!172;CL:0000988!3.26e-07!182;CL:0000071!8.64e-07!18;CL:0002546!8.64e-07!18|ontology_enrichment_celltype_v019=CL:0000542;6.43e-30;53!CL:0000084;4.76e-27;25!CL:0000791;1.77e-24;18!CL:0000789;1.77e-24;18!CL:0002419;1.77e-24;18!CL:0000236;2.92e-23;13!CL:0000945;2.35e-17;24!CL:0000625;3.79e-15;11!CL:0000624;6.30e-09;6!CL:0000898;9.15e-08;3!CL:0000623;1.23e-07;3!CL:0002087;4.35e-07;104|ontology_enrichment_celltype_v019_2=CL:0000542,6.41e-51,53;CL:0000051,6.41e-51,53;CL:0000838,6.02e-49,52;CL:0000084,2.98e-27,25;CL:0000827,2.98e-27,25;CL:0000236,4.50e-25,14;CL:0000791,1.05e-24,18;CL:0000789,1.05e-24,18;CL:0002420,1.05e-24,18;CL:0002419,1.05e-24,18;CL:0000790,1.05e-24,18;CL:0002087,5.77e-23,115;CL:0000738,4.04e-22,136;CL:0000945,2.10e-17,24;CL:0000826,2.10e-17,24;CL:0002031,9.69e-17,120;CL:0000037,2.79e-16,168;CL:0000988,1.23e-15,177;CL:0000625,5.12e-15,11;CL:0002032,9.32e-15,161;CL:0000837,9.32e-15,161;CL:0000624,2.85e-09,6;CL:0000898,8.85e-08,3;CL:0000623,1.18e-07,3;CL:0000825,1.18e-07,3;CL:0000767,5.12e-07,3|ontology_enrichment_development_v019=CL:0000051;6.43e-30;53!CL:0000790;1.77e-24;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!8.67e-08!15;UBERON:0000179!8.67e-08!15;UBERON:0000463!8.67e-08!15;UBERON:0001638!4.80e-07!9;UBERON:0003920!4.80e-07!9;UBERON:0004582!4.80e-07!9;UBERON:0001986!8.64e-07!18;UBERON:0004638!8.64e-07!18;UBERON:0004852!8.64e-07!18|ontology_enrichment_uberon_v019=UBERON:0000178;3.49e-11;15!UBERON:0000179;3.49e-11;15!UBERON:0000463;3.49e-11;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.24e-11,15;UBERON:0000179,2.24e-11,15;UBERON:0000463,2.24e-11,15|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.09340350391728,1.52908960491121,1.84636884759917,0,0,0,0,0,0,0,1.42800483870977,0,0,0,0,0.687720651731561,0.903106483949403,1.02324015707783,2.75354993794233,1.91914699048606,1.85779347979291,0,0,0,0,2.70121541726101,0.587200878669695,2.21598163412751,0.401088894940283,1.51907609501096,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0.962787081228281,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,8.79981222306614,7.64594055766984,7.11607403090844,4.26730222566507,7.60752375368424,5.74752439954483,5.94940385506376,1.90810750907073,2.27685187643779,2.34894875748376,1.52909291250092,5.28685314316103,0.560508562981536,0.790152254325231,0.393419540227666,1.96505381374582,1.85041349099558,3.17654341242288,3.91106719960308,2.8406868344084,0,1.78256731016278,5.00830042707223,2.87994062958707,2.97884250141517,1.40900451698243,1.56071217071854,2.63100647365882,3.03985019564433,1.73881851441031,1.77943875794473,2.1403266247177,1.04535523804977,2.71942422474159,3.44898444241729,3.4362744548263,2.27717722817553,2.22995790026868,4.55758417699493,0.950452044448374,3.16207750063323,3.19966527886046,6.24653632761729,1.4206635122641,4.10563998460523,2.01606743224732,2.67440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,1.38856200643038,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0,0,0,0,0,0,1.10298924103761,1.62028389576352,0.714397826272638,0.673588117878509,0.225222960966644,1.53316637465883,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0,0.759783069987479,0,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,1.3032332212413,0,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,1.62786481617433,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,5.94051263165695,2.56139988262505,4.31255149719035,4.62034930607094,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0.343143423810856,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C861 | |||
|description=CAGE_peak_at_chr7:142494446..142494458,+ | |||
|id=chr7:142494446..142494458,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.28e-31!53;CL:0000051!3.28e-31!53;CL:0000838!3.45e-30!52;CL:0000084!5.31e-19!25;CL:0000827!5.31e-19!25;CL:0000791!2.14e-17!18;CL:0000789!2.14e-17!18;CL:0002420!2.14e-17!18;CL:0002419!2.14e-17!18;CL:0000790!2.14e-17!18;CL:0000236!6.43e-13!14;CL:0000625!3.21e-11!11;CL:0002087!5.05e-11!119;CL:0000945!4.06e-10!24;CL:0000826!4.06e-10!24;CL:0000738!1.23e-09!140;CL:0002031!7.08e-08!124;CL:0000037!2.08e-07!172;CL:0000566!2.08e-07!172;CL:0000988!3.26e-07!182;CL:0000071!8.64e-07!18;CL:0002546!8.64e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.43e-30;53!CL:0000084;4.76e-27;25!CL:0000791;1.77e-24;18!CL:0000789;1.77e-24;18!CL:0002419;1.77e-24;18!CL:0000236;2.92e-23;13!CL:0000945;2.35e-17;24!CL:0000625;3.79e-15;11!CL:0000624;6.30e-09;6!CL:0000898;9.15e-08;3!CL:0000623;1.23e-07;3!CL:0002087;4.35e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.41e-51,53;CL:0000051,6.41e-51,53;CL:0000838,6.02e-49,52;CL:0000084,2.98e-27,25;CL:0000827,2.98e-27,25;CL:0000236,4.50e-25,14;CL:0000791,1.05e-24,18;CL:0000789,1.05e-24,18;CL:0002420,1.05e-24,18;CL:0002419,1.05e-24,18;CL:0000790,1.05e-24,18;CL:0002087,5.77e-23,115;CL:0000738,4.04e-22,136;CL:0000945,2.10e-17,24;CL:0000826,2.10e-17,24;CL:0002031,9.69e-17,120;CL:0000037,2.79e-16,168;CL:0000988,1.23e-15,177;CL:0000625,5.12e-15,11;CL:0002032,9.32e-15,161;CL:0000837,9.32e-15,161;CL:0000624,2.85e-09,6;CL:0000898,8.85e-08,3;CL:0000623,1.18e-07,3;CL:0000825,1.18e-07,3;CL:0000767,5.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.43e-30;53!CL:0000790;1.77e-24;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.67e-08!15;UBERON:0000179!8.67e-08!15;UBERON:0000463!8.67e-08!15;UBERON:0001638!4.80e-07!9;UBERON:0003920!4.80e-07!9;UBERON:0004582!4.80e-07!9;UBERON:0001986!8.64e-07!18;UBERON:0004638!8.64e-07!18;UBERON:0004852!8.64e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.49e-11;15!UBERON:0000179;3.49e-11;15!UBERON:0000463;3.49e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.24e-11,15;UBERON:0000179,2.24e-11,15;UBERON:0000463,2.24e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.09340350391728,1.52908960491121,1.84636884759917,0,0,0,0,0,0,0,1.42800483870977,0,0,0,0,0.687720651731561,0.903106483949403,1.02324015707783,2.75354993794233,1.91914699048606,1.85779347979291,0,0,0,0,2.70121541726101,0.587200878669695,2.21598163412751,0.401088894940283,1.51907609501096,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612167784741805,0.962787081228281,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,8.79981222306614,7.64594055766984,7.11607403090844,4.26730222566507,7.60752375368424,5.74752439954483,5.94940385506376,1.90810750907073,2.27685187643779,2.34894875748376,1.52909291250092,5.28685314316103,0.560508562981536,0.790152254325231,0.393419540227666,1.96505381374582,1.85041349099558,3.17654341242288,3.91106719960308,2.8406868344084,0,1.78256731016278,5.00830042707223,2.87994062958707,2.97884250141517,1.40900451698243,1.56071217071854,2.63100647365882,3.03985019564433,1.73881851441031,1.77943875794473,2.1403266247177,1.04535523804977,2.71942422474159,3.44898444241729,3.4362744548263,2.27717722817553,2.22995790026868,4.55758417699493,0.950452044448374,3.16207750063323,3.19966527886046,6.24653632761729,1.4206635122641,4.10563998460523,2.01606743224732,2.67440195783507,0.579297615531196,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,1.38856200643038,0.56530794192401,1.25849830862972,0.275118041940067,0.626984899610432,0,0,0,0,0,0,1.10298924103761,1.62028389576352,0.714397826272638,0.673588117878509,0.225222960966644,1.53316637465883,0.949265659568129,0.732806975721629,1.31780417436063,0,0,0,0.759783069987479,0,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0.756787138224657,0.576175924479999,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,1.3032332212413,0,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,1.62786481617433,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,5.94051263165695,2.56139988262505,4.31255149719035,4.62034930607094,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0.343143423810856,1.6541442089831,1.2942852049117,1.921096040462,0,0,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0.340187410553031,0.215915916102139,0,1.35473218771926,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.384380134730212,0,0,0.464845549297286,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0.632758849437452,0,0.255897791311334,0,0,0,0,0,0.471249609382746,0.404364963146632,0,0,0,0,0,0.9554993798559,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0.845086807596724,1.57752487424457,0.491245205065606,0,0.354761064070598,0,0,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,1.29151611801369,0,0,0.229723400206959,0.507447609232169,1.52927441428475,1.13929437434833,1.90585420366231,1.23408681925858,1.94541993357815,0.540031437238115,4.75875105776562,0,0,0,5.38829207864584,0,0,1.27541018183058,0.399158742865633,1.1490322207942,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0,0,0,0.659215496907038,0,0,0.828851746593443,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,9.19739683761629,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,4.01400536274465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0.548167698587004,0,0.316553979779393,0,0,0,0.19980960958213,0,0,0,0.720273989940749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,5.13790242934655,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,1.24411862352257,0.797525143673985,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,2.59983614611409,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.829887029570615,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,1.72850981333669,0.171488009437418,0,0.197318320688547,0,1.668471028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| |||
|short_description=p@chr7:142494446..142494458,+ | |||
}} |
Revision as of 23:41, 13 September 2013
Short description: | p@chr7:142494446..142494458, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142494446..142494458, + |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.41e-51 | 53 |
common lymphoid progenitor | 6.41e-51 | 53 |
lymphoid lineage restricted progenitor cell | 6.02e-49 | 52 |
T cell | 2.98e-27 | 25 |
pro-T cell | 2.98e-27 | 25 |
B cell | 4.50e-25 | 14 |
mature alpha-beta T cell | 1.05e-24 | 18 |
alpha-beta T cell | 1.05e-24 | 18 |
immature T cell | 1.05e-24 | 18 |
mature T cell | 1.05e-24 | 18 |
immature alpha-beta T cell | 1.05e-24 | 18 |
nongranular leukocyte | 5.77e-23 | 115 |
leukocyte | 4.04e-22 | 136 |
lymphocyte of B lineage | 2.10e-17 | 24 |
pro-B cell | 2.10e-17 | 24 |
hematopoietic lineage restricted progenitor cell | 9.69e-17 | 120 |
hematopoietic stem cell | 2.79e-16 | 168 |
hematopoietic cell | 1.23e-15 | 177 |
CD8-positive, alpha-beta T cell | 5.12e-15 | 11 |
hematopoietic oligopotent progenitor cell | 9.32e-15 | 161 |
hematopoietic multipotent progenitor cell | 9.32e-15 | 161 |
CD4-positive, alpha-beta T cell | 2.85e-09 | 6 |
naive T cell | 8.85e-08 | 3 |
natural killer cell | 1.18e-07 | 3 |
pro-NK cell | 1.18e-07 | 3 |
basophil | 5.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.24e-11 | 15 |
haemolymphatic fluid | 2.24e-11 | 15 |
organism substance | 2.24e-11 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.