FFCP PHASE1:Mm9::chr2:32243611..32243616,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16819|HGNC=|MCL_coexpression_id=9|UniProt=P11672|association_with_transcript=-294bp_to_ENSMUST00000050785_5end|description=CAGE_peak_11_at_Lcn2_5end|id=chr2:32243611..32243616,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000080!1.34e-09!4;UBERON:0005904!1.34e-09!4;UBERON:0006947!1.34e-09!4;UBERON:0002120!1.34e-09!4;UBERON:0004054!1.34e-09!4;UBERON:0004875!1.34e-09!4;UBERON:0004876!1.34e-09!4;UBERON:0005721!1.34e-09!4;UBERON:0005754!1.34e-09!4;UBERON:0007297!1.34e-09!4;UBERON:0001301!1.06e-07!3;UBERON:0006555!1.06e-07!3;UBERON:0005103!1.06e-07!3;UBERON:0000083!1.06e-07!3;UBERON:0009201!1.06e-07!3;UBERON:0004819!1.06e-07!3;UBERON:0006553!1.06e-07!3;UBERON:0003074!1.06e-07!3;UBERON:0003060!1.06e-07!3;UBERON:0004871!1.99e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.39e-22,1;UBERON:0001736,1.39e-22,1;UBERON:0003293,1.39e-22,1;UBERON:0003294,1.39e-22,1;UBERON:0001829,1.39e-22,1;UBERON:0010047,1.39e-22,1;UBERON:0000167,1.39e-22,1;UBERON:0006298,1.39e-22,1;UBERON:0000165,5.17e-12,2;UBERON:0000166,5.17e-12,2;UBERON:0000930,5.17e-12,2;UBERON:0001301,1.13e-08,3;UBERON:0006555,1.13e-08,3;UBERON:0005103,1.13e-08,3;UBERON:0000083,1.13e-08,3;UBERON:0009201,1.13e-08,3;UBERON:0004819,1.13e-08,3;UBERON:0006553,1.13e-08,3;UBERON:0003074,1.13e-08,3;UBERON:0003060,1.13e-08,3;UBERON:0003135,6.77e-07,15;UBERON:0000080,8.08e-07,4;UBERON:0005904,8.08e-07,4;UBERON:0006947,8.08e-07,4;UBERON:0002120,8.08e-07,4;UBERON:0004054,8.08e-07,4;UBERON:0004875,8.08e-07,4;UBERON:0004876,8.08e-07,4;UBERON:0005721,8.08e-07,4;UBERON:0005754,8.08e-07,4;UBERON:0007297,8.08e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0.611036183101898,0.622034853050465,6.57079171927554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,1.69107881605257,0,0,0,0,0,0,0,0.104859344425711,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0|short_description=p11@Lcn2}} | ||
|EntrezGene=16819 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=P11672 | |||
|association_with_transcript=-294bp_to_ENSMUST00000050785_5end | |||
|description=CAGE_peak_11_at_Lcn2_5end | |||
|id=chr2:32243611..32243616,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!1.34e-09!4;UBERON:0005904!1.34e-09!4;UBERON:0006947!1.34e-09!4;UBERON:0002120!1.34e-09!4;UBERON:0004054!1.34e-09!4;UBERON:0004875!1.34e-09!4;UBERON:0004876!1.34e-09!4;UBERON:0005721!1.34e-09!4;UBERON:0005754!1.34e-09!4;UBERON:0007297!1.34e-09!4;UBERON:0001301!1.06e-07!3;UBERON:0006555!1.06e-07!3;UBERON:0005103!1.06e-07!3;UBERON:0000083!1.06e-07!3;UBERON:0009201!1.06e-07!3;UBERON:0004819!1.06e-07!3;UBERON:0006553!1.06e-07!3;UBERON:0003074!1.06e-07!3;UBERON:0003060!1.06e-07!3;UBERON:0004871!1.99e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.39e-22,1;UBERON:0001736,1.39e-22,1;UBERON:0003293,1.39e-22,1;UBERON:0003294,1.39e-22,1;UBERON:0001829,1.39e-22,1;UBERON:0010047,1.39e-22,1;UBERON:0000167,1.39e-22,1;UBERON:0006298,1.39e-22,1;UBERON:0000165,5.17e-12,2;UBERON:0000166,5.17e-12,2;UBERON:0000930,5.17e-12,2;UBERON:0001301,1.13e-08,3;UBERON:0006555,1.13e-08,3;UBERON:0005103,1.13e-08,3;UBERON:0000083,1.13e-08,3;UBERON:0009201,1.13e-08,3;UBERON:0004819,1.13e-08,3;UBERON:0006553,1.13e-08,3;UBERON:0003074,1.13e-08,3;UBERON:0003060,1.13e-08,3;UBERON:0003135,6.77e-07,15;UBERON:0000080,8.08e-07,4;UBERON:0005904,8.08e-07,4;UBERON:0006947,8.08e-07,4;UBERON:0002120,8.08e-07,4;UBERON:0004054,8.08e-07,4;UBERON:0004875,8.08e-07,4;UBERON:0004876,8.08e-07,4;UBERON:0005721,8.08e-07,4;UBERON:0005754,8.08e-07,4;UBERON:0007297,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,1.3599426674155,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0.611036183101898,0.622034853050465,6.57079171927554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,1.69107881605257,0,0,0,0,0,0,0,0.104859344425711,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0,0.34461281373368,0,0.231768651889711,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0.145346416632329,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p11@Lcn2 | |||
}} |
Revision as of 23:47, 13 September 2013
Short description: | p11@Lcn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Lcn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -294bp_to_ENSMUST00000050785_5end |
EntrezGene: | Lcn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.39e-22 | 1 |
submandibular gland | 1.39e-22 | 1 |
gland of oral region | 1.39e-22 | 1 |
gland of foregut | 1.39e-22 | 1 |
major salivary gland | 1.39e-22 | 1 |
oral gland | 1.39e-22 | 1 |
oral cavity | 1.39e-22 | 1 |
submandibular gland primordium | 1.39e-22 | 1 |
mouth | 5.17e-12 | 2 |
oral opening | 5.17e-12 | 2 |
stomodeum | 5.17e-12 | 2 |
epididymis | 1.13e-08 | 3 |
excretory tube | 1.13e-08 | 3 |
mesonephric epithelium | 1.13e-08 | 3 |
mesonephric tubule | 1.13e-08 | 3 |
nephric duct | 1.13e-08 | 3 |
kidney epithelium | 1.13e-08 | 3 |
renal duct | 1.13e-08 | 3 |
mesonephric duct | 1.13e-08 | 3 |
pronephric duct | 1.13e-08 | 3 |
male reproductive organ | 6.77e-07 | 15 |
mesonephros | 8.08e-07 | 4 |
duct of male reproductive system | 8.08e-07 | 4 |
male genital duct | 8.08e-07 | 4 |
pronephros | 8.08e-07 | 4 |
internal male genitalia | 8.08e-07 | 4 |
nephrogenic cord | 8.08e-07 | 4 |
urogenital ridge | 8.08e-07 | 4 |
pronephric mesoderm | 8.08e-07 | 4 |
rostral part of nephrogenic cord | 8.08e-07 | 4 |
presumptive pronephric mesoderm | 8.08e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.