FFCP PHASE1:Hg19::chr7:150554388..150554409,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C533|description=CAGE_peak_at_chr7:150554388..150554409,+|id=chr7:150554388..150554409,+|ontology_enrichment_celltype=CL:0002541!8.05e-27!3;CL:0000453!7.80e-16!5;CL:0002568!2.26e-09!1;CL:0000990!4.95e-09!8;CL:0000451!1.79e-07!10|ontology_enrichment_celltype_v019=CL:0002541;5.00e-67;3!CL:0000349;2.98e-11;19|ontology_enrichment_celltype_v019_2=CL:0002541,5.01e-67,3;CL:0000349,2.98e-11,19|ontology_enrichment_development_v019=UBERON:0003124;4.59e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!8.05e-27!3;UBERON:0000920!8.05e-27!3;UBERON:0003124!4.17e-20!7;UBERON:0005631!3.27e-15!14;UBERON:0000158!3.27e-15!14;UBERON:0000478!2.78e-12!24;UBERON:0002079!9.70e-10!1;UBERON:0000160!2.28e-07!27|ontology_enrichment_uberon_v019=UBERON:0003124;5.00e-67;3!UBERON:0000920;5.00e-67;3!UBERON:0005631;9.82e-21;10!UBERON:0000158;9.82e-21;10!UBERON:0002108;2.11e-18;4!UBERON:0000478;3.36e-15;24!UBERON:0000160;1.26e-11;17!UBERON:0005409;3.07e-09;22!UBERON:0002114;1.35e-08;2!UBERON:0001987;9.36e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.01e-67,3;UBERON:0003124,8.98e-51,7;UBERON:0005631,1.05e-25,14;UBERON:0000158,1.05e-25,14;UBERON:0002108,2.11e-18,4;UBERON:0000478,3.29e-15,24;UBERON:0000160,1.24e-11,17;UBERON:0002114,1.51e-08,2;UBERON:0005409,3.01e-08,25;UBERON:0001987,9.11e-07,4;UBERON:0004340,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50901275705111,9.52614971379368,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83064206410685,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.797189041880179,1.30852315404675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92935395269862,0,2.82190377816914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:150554388..150554409,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C533 | |||
|description=CAGE_peak_at_chr7:150554388..150554409,+ | |||
|id=chr7:150554388..150554409,+ | |||
|ontology_enrichment_celltype=CL:0002541!8.05e-27!3;CL:0000453!7.80e-16!5;CL:0002568!2.26e-09!1;CL:0000990!4.95e-09!8;CL:0000451!1.79e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.00e-67;3!CL:0000349;2.98e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.01e-67,3;CL:0000349,2.98e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!8.05e-27!3;UBERON:0000920!8.05e-27!3;UBERON:0003124!4.17e-20!7;UBERON:0005631!3.27e-15!14;UBERON:0000158!3.27e-15!14;UBERON:0000478!2.78e-12!24;UBERON:0002079!9.70e-10!1;UBERON:0000160!2.28e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.00e-67;3!UBERON:0000920;5.00e-67;3!UBERON:0005631;9.82e-21;10!UBERON:0000158;9.82e-21;10!UBERON:0002108;2.11e-18;4!UBERON:0000478;3.36e-15;24!UBERON:0000160;1.26e-11;17!UBERON:0005409;3.07e-09;22!UBERON:0002114;1.35e-08;2!UBERON:0001987;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.01e-67,3;UBERON:0003124,8.98e-51,7;UBERON:0005631,1.05e-25,14;UBERON:0000158,1.05e-25,14;UBERON:0002108,2.11e-18,4;UBERON:0000478,3.29e-15,24;UBERON:0000160,1.24e-11,17;UBERON:0002114,1.51e-08,2;UBERON:0005409,3.01e-08,25;UBERON:0001987,9.11e-07,4;UBERON:0004340,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50901275705111,9.52614971379368,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83064206410685,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.797189041880179,1.30852315404675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92935395269862,0,2.82190377816914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:150554388..150554409,+ | |||
}} |
Revision as of 23:57, 13 September 2013
Short description: | p@chr7:150554388..150554409, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:150554388..150554409, + |
Coexpression cluster: | C533_chorionic_amniotic_pancreatic_placenta_choriocarcinoma_Placental_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.01e-67 | 3 |
extraembryonic cell | 2.98e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.01e-67 | 3 |
chorion | 8.98e-51 | 7 |
extraembryonic membrane | 1.05e-25 | 14 |
membranous layer | 1.05e-25 | 14 |
small intestine | 2.11e-18 | 4 |
extraembryonic structure | 3.29e-15 | 24 |
intestine | 1.24e-11 | 17 |
duodenum | 1.51e-08 | 2 |
gastrointestinal system | 3.01e-08 | 25 |
placenta | 9.11e-07 | 4 |
allantois | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.