FFCP PHASE1:Mm9::chr2:6307329..6307352,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2600|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:6307329..6307352,+|id=chr2:6307329..6307352,+|ontology_enrichment_celltype=CL:0000107!3.99e-08!9|ontology_enrichment_celltype_v019_2=CL:0000217,1.32e-10,2;CL:0000328,1.32e-10,2;CL:0002573,1.32e-10,2;CL:0002376,1.32e-10,2;CL:0000218,1.32e-10,2;CL:0000692,1.32e-10,2;CL:0002377,1.32e-10,2;CL:0002375,1.32e-10,2;CL:0002611,8.62e-10,2;CL:0000221,4.57e-09,44;CL:0000133,4.57e-09,44;CL:0002319,1.94e-07,43;CL:0000215,2.44e-07,3;CL:0002612,5.99e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.91e-12!102;UBERON:0000924!2.91e-12!102;UBERON:0006601!2.91e-12!102;UBERON:0000010!1.26e-10!11;UBERON:0000073!1.35e-08!75;UBERON:0001016!1.35e-08!75;UBERON:0002410!3.99e-08!9;UBERON:0001017!2.88e-07!73;UBERON:0005743!2.88e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.86e-18,6;UBERON:0005174,1.86e-18,6;UBERON:0001137,1.86e-18,6;UBERON:0000011,8.53e-15,3;UBERON:0001948,1.48e-14,5;UBERON:0002315,1.48e-14,5;UBERON:0003076,6.04e-13,12;UBERON:0003057,6.04e-13,12;UBERON:0000010,1.07e-10,11;UBERON:0002256,8.62e-10,2;UBERON:0004121,1.34e-09,95;UBERON:0000924,1.34e-09,95;UBERON:0006601,1.34e-09,95;UBERON:0002257,5.99e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,1.14260393761521,3.75476519617743,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,2.94628585473668,2.27794689278565,0,9.0114170066489,4.23200736597999,0,0,0,0,0,0,0.280888840263504,0,0,0,15.6336195952115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0,0.484875253135222,0,0,0.628340120440365,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0.20778804455956,0.973447578406546,0.101839363850316,0.248813941220186,0,1.05220927943237,0,0,0.180062129805349,0,0,0.384341160854549,0.562210347358373,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,2.10981035865966,0,1.26235463602186,0,0.390438744296638,0.215423397732799,3.10659437338318,6.90675889655422,3.96307143104365,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,0,0.661585194164886,0.98931751764888,0,0.422190474497091,0.477489376012546,1.14898629821543,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.128050304809739,0.114870937911227,0,0,0.578727661391115,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,1.3390183244819,1.54413993383661,3.01428186306548|short_description=p@chr2:6307329..6307352,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2600 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:6307329..6307352,+ | |||
|id=chr2:6307329..6307352,+ | |||
|ontology_enrichment_celltype=CL:0000107!3.99e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.32e-10,2;CL:0000328,1.32e-10,2;CL:0002573,1.32e-10,2;CL:0002376,1.32e-10,2;CL:0000218,1.32e-10,2;CL:0000692,1.32e-10,2;CL:0002377,1.32e-10,2;CL:0002375,1.32e-10,2;CL:0002611,8.62e-10,2;CL:0000221,4.57e-09,44;CL:0000133,4.57e-09,44;CL:0002319,1.94e-07,43;CL:0000215,2.44e-07,3;CL:0002612,5.99e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.91e-12!102;UBERON:0000924!2.91e-12!102;UBERON:0006601!2.91e-12!102;UBERON:0000010!1.26e-10!11;UBERON:0000073!1.35e-08!75;UBERON:0001016!1.35e-08!75;UBERON:0002410!3.99e-08!9;UBERON:0001017!2.88e-07!73;UBERON:0005743!2.88e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.86e-18,6;UBERON:0005174,1.86e-18,6;UBERON:0001137,1.86e-18,6;UBERON:0000011,8.53e-15,3;UBERON:0001948,1.48e-14,5;UBERON:0002315,1.48e-14,5;UBERON:0003076,6.04e-13,12;UBERON:0003057,6.04e-13,12;UBERON:0000010,1.07e-10,11;UBERON:0002256,8.62e-10,2;UBERON:0004121,1.34e-09,95;UBERON:0000924,1.34e-09,95;UBERON:0006601,1.34e-09,95;UBERON:0002257,5.99e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,1.14260393761521,3.75476519617743,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,2.94628585473668,2.27794689278565,0,9.0114170066489,4.23200736597999,0,0,0,0,0,0,0.280888840263504,0,0,0,15.6336195952115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.808834249737046,0,0.484875253135222,0,0,0.628340120440365,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0.20778804455956,0.973447578406546,0.101839363850316,0.248813941220186,0,1.05220927943237,0,0,0.180062129805349,0,0,0.384341160854549,0.562210347358373,1.29351685369508,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,2.10981035865966,0,1.26235463602186,0,0.390438744296638,0.215423397732799,3.10659437338318,6.90675889655422,3.96307143104365,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.493647061806363,0.304464949114599,0,0,0.661585194164886,0.98931751764888,0,0.422190474497091,0.477489376012546,1.14898629821543,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,1.13365191807606,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.128050304809739,0.114870937911227,0,0,0.578727661391115,0,0,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0.214871054048298,1.3390183244819,1.54413993383661,3.01428186306548 | |||
|short_description=p@chr2:6307329..6307352,+ | |||
}} |
Revision as of 00:16, 14 September 2013
Short description: | p@chr2:6307329..6307352, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:6307329..6307352, + |
Coexpression cluster: | MCL_coexpression_mm9:2600 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.32e-10 | 2 |
myelin accumulating cell | 1.32e-10 | 2 |
Schwann cell | 1.32e-10 | 2 |
non-myelinating Schwann cell | 1.32e-10 | 2 |
myelinating Schwann cell;;Schwann cell | 1.32e-10 | 2 |
terminal Schwann cell | 1.32e-10 | 2 |
immature Schwann cell | 1.32e-10 | 2 |
Schwann cell precursor | 1.32e-10 | 2 |
neuron of the dorsal spinal cord | 8.62e-10 | 2 |
ectodermal cell | 4.57e-09 | 44 |
neurectodermal cell | 4.57e-09 | 44 |
neural cell | 1.94e-07 | 43 |
barrier cell | 2.44e-07 | 3 |
neuron of the ventral spinal cord | 5.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.86e-18 | 6 |
dorsal region element | 1.86e-18 | 6 |
dorsum | 1.86e-18 | 6 |
parasympathetic nervous system | 8.53e-15 | 3 |
regional part of spinal cord | 1.48e-14 | 5 |
gray matter of spinal cord | 1.48e-14 | 5 |
posterior neural tube | 6.04e-13 | 12 |
chordal neural plate | 6.04e-13 | 12 |
peripheral nervous system | 1.07e-10 | 11 |
dorsal horn of spinal cord | 8.62e-10 | 2 |
ectoderm-derived structure | 1.34e-09 | 95 |
ectoderm | 1.34e-09 | 95 |
presumptive ectoderm | 1.34e-09 | 95 |
ventral horn of spinal cord | 5.99e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.