FFCP PHASE1:Hg19::chr7:27213696..27213713,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3206|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5100|TSSclassifier=W|UniProt=|association_with_transcript=160bp_to_AB464570,DQ891906,DQ895092,DQ896836_5end|description=CAGE_peak_10_at_HOXA10_5end|id=chr7:27213696..27213713,-|ontology_enrichment_celltype=CL:0000035!1.93e-07!20;CL:0002681!5.47e-07!13;CL:0002584!5.47e-07!13|ontology_enrichment_celltype_v019=CL:0002681;6.04e-08;12!CL:0002584;6.04e-08;12|ontology_enrichment_celltype_v019_2=CL:0002681,6.74e-08,12;CL:0002584,6.74e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!3.17e-09!239;DOID:162!5.41e-08!235|ontology_enrichment_disease_v019=DOID:4362;3.98e-09;5!DOID:3119;4.12e-07;14|ontology_enrichment_disease_v019_2=DOID:4362,3.83e-09,5;DOID:3119,4.53e-07,14|ontology_enrichment_uberon=UBERON:0006554!2.38e-12!44;UBERON:0001008!6.96e-12!45;UBERON:0003064!3.15e-08!37;UBERON:0001737!7.07e-08!9;UBERON:0002113!3.49e-07!27;UBERON:0003918!3.49e-07!27;UBERON:0005095!3.49e-07!27;UBERON:0007687!3.49e-07!27;UBERON:0000489!5.11e-07!32;UBERON:0001225!5.47e-07!13;UBERON:0008987!5.47e-07!13|ontology_enrichment_uberon_v019=UBERON:0006554;4.26e-08;30!UBERON:0001008;4.26e-08;30!UBERON:0001225;6.04e-08;12!UBERON:0008987;6.04e-08;12!UBERON:0000002;9.57e-08;6!UBERON:0001560;9.57e-08;6!UBERON:0002113;9.05e-07;24!UBERON:0011143;9.05e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0001225,6.74e-08,12;UBERON:0008987,6.74e-08,12;UBERON:0000002,9.26e-08,6;UBERON:0001560,9.26e-08,6|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0.81014194788176,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.68205903612839,0,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,0.964044119533928,0.441175890929576,1.08939722046203,0.474541238222193,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0.799266537048298,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0.902838299183157,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.34444334449382,0,0,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0.863663664408557,1.54227252690289,1.35473218771926,0.501689773854853,1.52925763827023,0.831076008928724,0.671624264166535,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.340906509664404,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.823611089208164,0.235624804691373,0,0,0,0,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,2.59453182862662,1.7235483311913,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0.677167111206413,0.321176150207399,0.201799707191048,0.851692475380653,0,0.614481528616916,0.223676107892416,0.333698283423817,0.586164286206121,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,2.77126022639704,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0.347249989866585,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.652931232636591,0,0,0,0.353830258013357,1.22206028986725,0,0.123563938946503,0.417687798021821,0,0,0,0.182454789215666,0,0,0,0,0,0,0.450970258243478,1.7626992537532,0,0,0,0,1.70765727617876,0,0,0.195984794828755,0.34823682632161,0,0,0,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0.213452994739353,0.599428828746391,0,0,3.94668495082519,0,0,0.235694034616795,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630445658393585,0.944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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=160bp_to_AB464570,DQ891906,DQ895092,DQ896836_5end | |||
|description=CAGE_peak_10_at_HOXA10_5end | |||
|id=chr7:27213696..27213713,- | |||
|ontology_enrichment_celltype=CL:0000035!1.93e-07!20;CL:0002681!5.47e-07!13;CL:0002584!5.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002681;6.04e-08;12!CL:0002584;6.04e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002681,6.74e-08,12;CL:0002584,6.74e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.17e-09!239;DOID:162!5.41e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.98e-09;5!DOID:3119;4.12e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.83e-09,5;DOID:3119,4.53e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0006554!2.38e-12!44;UBERON:0001008!6.96e-12!45;UBERON:0003064!3.15e-08!37;UBERON:0001737!7.07e-08!9;UBERON:0002113!3.49e-07!27;UBERON:0003918!3.49e-07!27;UBERON:0005095!3.49e-07!27;UBERON:0007687!3.49e-07!27;UBERON:0000489!5.11e-07!32;UBERON:0001225!5.47e-07!13;UBERON:0008987!5.47e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.26e-08;30!UBERON:0001008;4.26e-08;30!UBERON:0001225;6.04e-08;12!UBERON:0008987;6.04e-08;12!UBERON:0000002;9.57e-08;6!UBERON:0001560;9.57e-08;6!UBERON:0002113;9.05e-07;24!UBERON:0011143;9.05e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,6.74e-08,12;UBERON:0008987,6.74e-08,12;UBERON:0000002,9.26e-08,6;UBERON:0001560,9.26e-08,6 | |||
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|short_description=p10@HOXA10 | |||
}} |
Revision as of 00:45, 14 September 2013
Short description: | p10@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 160bp_to_AB464570, DQ891906, DQ895092, DQ896836_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 6.74e-08 | 12 |
renal cortical epithelial cell | 6.74e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 6.74e-08 | 12 |
renal parenchyma | 6.74e-08 | 12 |
uterine cervix | 9.26e-08 | 6 |
neck of organ | 9.26e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.83e-09 | 5 |
gastrointestinal system cancer | 4.53e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.