FFCP PHASE1:Mm9::chr3:127256128..127256143,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=28036|HGNC=|MCL_coexpression_id=327|UniProt=Q05CL8|association_with_transcript=122bp_to_ENSMUST00000029588_5end|description=CAGE_peak_2_at_Larp7_5end|id=chr3:127256128..127256143,-|ontology_enrichment_celltype=CL:0000542!1.67e-07!13;CL:0000051!1.67e-07!13;CL:0000838!4.12e-07!12|ontology_enrichment_celltype_v019_2=CL:0000542,2.75e-09,13;CL:0000051,2.75e-09,13;CL:0000791,5.14e-09,9;CL:0000789,5.14e-09,9;CL:0002420,5.14e-09,9;CL:0002419,5.14e-09,9;CL:0000790,5.14e-09,9;CL:0000838,1.02e-08,12;CL:0000624,4.52e-08,8;CL:0000084,7.57e-08,11;CL:0000827,7.57e-08,11;CL:0000988,2.39e-07,32;CL:0002032,2.39e-07,32;CL:0000037,2.39e-07,32;CL:0000837,2.39e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.10e-10,36;UBERON:0002370,3.76e-09,23;UBERON:0000974,3.76e-09,23;UBERON:0004807,3.76e-09,23;UBERON:0005058,3.76e-09,23;UBERON:0003351,3.76e-09,23;UBERON:0009113,3.76e-09,23;UBERON:0003295,3.76e-09,23;UBERON:0009722,3.76e-09,23;UBERON:0005562,3.76e-09,23;UBERON:0007690,3.76e-09,23;UBERON:0000153,5.50e-09,43;UBERON:0006562,1.65e-08,24;UBERON:0003408,1.65e-08,24;UBERON:0001557,1.65e-08,24;UBERON:0001042,1.65e-08,24;UBERON:0008814,1.65e-08,24;UBERON:0009145,1.65e-08,24;UBERON:0000072,1.02e-07,27;UBERON:0004177,1.66e-07,29;UBERON:0005057,1.66e-07,29;UBERON:0001048,2.19e-07,134|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0.700837921786577,3.61545305636414,18.7249000461717,28.5558722112832,16.4369249496485,15.5555710040906,1.36960583944965,1.66098764596095,0,0.202475267389826,0.699561878128147,2.20823515750766,1.64537320326887,2.54633791078818,3.57181818634493,0.893618560807968,1.04479915655574,0,0.45881856213434,0,0,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.405507724878058,0.367093504323363,0,0,0,0.194429899074283,0,0,4.36234775750115,2.90144856804538,7.39406358113421,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.367472397644862,0.287536413054709,0,0,0.638436690425939,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0.832988126665025,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,1.02258193546835,1.81850203222008,1.06001872353102,1.54927761754349,1.28326477414318,0,0,0.216491041011214,1.26679932737549,0.505524445014783,0.68510327831436,5.43769555659061,0.445326417194474,0.520455980298408,0.608930956624282,0.922461989024234,0.301445281105245,0.470354828542819,0.376999773989026,0.247194967734374,0.86759614151947,0.884610551949874,0.970601099684455,0.441683036920787,2.42437626567611,0,0.585561594023094,0.41889341362691,0,1.91704199209472,1.79970819298022,2.41433431438823,0.748953197024114,0.915001205637253,0.376963056338593,0.869121600961382,1.27857728665165,0.20778804455956,0,0.916554274652847,0.746441823660558,1.51633655060205,0.420883711772948,2.34216797332867,1.60931473103431,1.44049703844279,1.50704817835715,1.15662048557257,1.2811372028485,0.655912071918102,1.29351685369508,0.646703978798527,0.567318240503458,1.75951124163949,0.43839146485515,0.834141747676794,0.348252166522167,1.02891068203972,0.796137067273973,2.80885274925294,3.08817488537658,0.852490498186778,3.31401236056803,2.11073453982987,2.34080679899319,0.946978942340841,0.983821158737019,2.77680803197281,2.09280550275367,1.3413670069981,1.63471479314037,2.46839774870221,1.97000956894914,0.486412857275134,0.730999937126662,0.878200461164203,0.536825675041487,1.47202963994889,0.92614151141356,0,0,1.70630600428187,0.696710015581316,1.15980715189884,0.80673409849337,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,1.82797620175566,0,0.814605311381257,1.55161989734101,0.841629838683823,0.442655759869801,0.885660887877613,0.627994911365499,0,0,1.16791574001266,0.982794975566015,1.12431056192427,1.01430060694251,1.20588579876208,0,0.287696137450811,0.324270453550071,1.09824565275233,2.87536413054709,0.744281895337007,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,1.79261474086228,1.18821560042632,0.938760993154008,1.17254380209271,0.952174563544055,0.780534591431195,1.26108115284953,1.10732344824387,1.59454768657487,0.655453258862952,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,0,0.80275294993896,0.820481806145422,1.3114795630134,0.757412781613119,0.631016438832513,2.34263246577983,0.646270193198397,1.19484398976276,0,0.283076530788832,0.809621403349789,0,0.395287777946524,0.963963949265421,0.709700426041343,0.890328018336276,1.30309567482861,1.48473110675282,1.32745138339963,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,0,0.36353372947750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| ||
|EntrezGene=28036 | |||
|HGNC= | |||
|MCL_coexpression_id=327 | |||
|UniProt=Q05CL8 | |||
|association_with_transcript=122bp_to_ENSMUST00000029588_5end | |||
|description=CAGE_peak_2_at_Larp7_5end | |||
|id=chr3:127256128..127256143,- | |||
|ontology_enrichment_celltype=CL:0000542!1.67e-07!13;CL:0000051!1.67e-07!13;CL:0000838!4.12e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.75e-09,13;CL:0000051,2.75e-09,13;CL:0000791,5.14e-09,9;CL:0000789,5.14e-09,9;CL:0002420,5.14e-09,9;CL:0002419,5.14e-09,9;CL:0000790,5.14e-09,9;CL:0000838,1.02e-08,12;CL:0000624,4.52e-08,8;CL:0000084,7.57e-08,11;CL:0000827,7.57e-08,11;CL:0000988,2.39e-07,32;CL:0002032,2.39e-07,32;CL:0000037,2.39e-07,32;CL:0000837,2.39e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.10e-10,36;UBERON:0002370,3.76e-09,23;UBERON:0000974,3.76e-09,23;UBERON:0004807,3.76e-09,23;UBERON:0005058,3.76e-09,23;UBERON:0003351,3.76e-09,23;UBERON:0009113,3.76e-09,23;UBERON:0003295,3.76e-09,23;UBERON:0009722,3.76e-09,23;UBERON:0005562,3.76e-09,23;UBERON:0007690,3.76e-09,23;UBERON:0000153,5.50e-09,43;UBERON:0006562,1.65e-08,24;UBERON:0003408,1.65e-08,24;UBERON:0001557,1.65e-08,24;UBERON:0001042,1.65e-08,24;UBERON:0008814,1.65e-08,24;UBERON:0009145,1.65e-08,24;UBERON:0000072,1.02e-07,27;UBERON:0004177,1.66e-07,29;UBERON:0005057,1.66e-07,29;UBERON:0001048,2.19e-07,134 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0.700837921786577,3.61545305636414,18.7249000461717,28.5558722112832,16.4369249496485,15.5555710040906,1.36960583944965,1.66098764596095,0,0.202475267389826,0.699561878128147,2.20823515750766,1.64537320326887,2.54633791078818,3.57181818634493,0.893618560807968,1.04479915655574,0,0.45881856213434,0,0,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.405507724878058,0.367093504323363,0,0,0,0.194429899074283,0,0,4.36234775750115,2.90144856804538,7.39406358113421,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.367472397644862,0.287536413054709,0,0,0.638436690425939,0.307213066512487,0.263772575460388,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0.832988126665025,0.529000920747499,0.289864488701678,0,0,0.539703191637817,0,0,0.983110940922263,1.02258193546835,1.81850203222008,1.06001872353102,1.54927761754349,1.28326477414318,0,0,0.216491041011214,1.26679932737549,0.505524445014783,0.68510327831436,5.43769555659061,0.445326417194474,0.520455980298408,0.608930956624282,0.922461989024234,0.301445281105245,0.470354828542819,0.376999773989026,0.247194967734374,0.86759614151947,0.884610551949874,0.970601099684455,0.441683036920787,2.42437626567611,0,0.585561594023094,0.41889341362691,0,1.91704199209472,1.79970819298022,2.41433431438823,0.748953197024114,0.915001205637253,0.376963056338593,0.869121600961382,1.27857728665165,0.20778804455956,0,0.916554274652847,0.746441823660558,1.51633655060205,0.420883711772948,2.34216797332867,1.60931473103431,1.44049703844279,1.50704817835715,1.15662048557257,1.2811372028485,0.655912071918102,1.29351685369508,0.646703978798527,0.567318240503458,1.75951124163949,0.43839146485515,0.834141747676794,0.348252166522167,1.02891068203972,0.796137067273973,2.80885274925294,3.08817488537658,0.852490498186778,3.31401236056803,2.11073453982987,2.34080679899319,0.946978942340841,0.983821158737019,2.77680803197281,2.09280550275367,1.3413670069981,1.63471479314037,2.46839774870221,1.97000956894914,0.486412857275134,0.730999937126662,0.878200461164203,0.536825675041487,1.47202963994889,0.92614151141356,0,0,1.70630600428187,0.696710015581316,1.15980715189884,0.80673409849337,0.444756087689741,0.380451252225118,0,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,1.82797620175566,0,0.814605311381257,1.55161989734101,0.841629838683823,0.442655759869801,0.885660887877613,0.627994911365499,0,0,1.16791574001266,0.982794975566015,1.12431056192427,1.01430060694251,1.20588579876208,0,0.287696137450811,0.324270453550071,1.09824565275233,2.87536413054709,0.744281895337007,0,0,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,1.79261474086228,1.18821560042632,0.938760993154008,1.17254380209271,0.952174563544055,0.780534591431195,1.26108115284953,1.10732344824387,1.59454768657487,0.655453258862952,0.518054945597687,0.433947175744535,0,0.54390568381871,0.491764273019036,0,0.80275294993896,0.820481806145422,1.3114795630134,0.757412781613119,0.631016438832513,2.34263246577983,0.646270193198397,1.19484398976276,0,0.283076530788832,0.809621403349789,0,0.395287777946524,0.963963949265421,0.709700426041343,0.890328018336276,1.30309567482861,1.48473110675282,1.32745138339963,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0,0,0,1.02131881726136,1.26042765821917,0.258717367565509,0.643011105094777,1.06404140185364,0.891844088010353,0.493647061806363,0.304464949114599,0.704015124191131,0.21183207086382,0.220528398054962,1.15420377059036,0.322928853391811,0.904693873922338,1.07435109602823,0.492422699235184,0.291480836629851,0.556275906031529,0.683483523191411,1.23832120777933,0.185194527369712,0.941842285023455,1.23024804948923,0.457556346413045,8.83887835968048,6.43776680688827,5.38979897837253,0,1.58167996790568,1.21991680276109,0.648032044930808,0.209088296014469,1.74690050996942,0.269728692769641,0.661227645802687,0.26175594198403,0.259229946583586,0,18.6018669765783,1.34564891439581,0.827292452285488,0.972255941720238,1.03327858782185,1.520605129417,1.05621514781179,1.3020438484395,2.9360616439199,5.31485065817213,10.9451402377989,1.26404448251271,1.41907650703115,1.43795340030758,1.16928740680016,1.07416017400489,0.993406773906324,1.32214994471966,1.03382669022204,2.3222283488074,1.447929326445,1.71404514732629,1.8516997340553,1.6356013078856,1.05189211963412,0.453460767230423,0.665957860122194,0.807424709485281,2.01461539636894,0,0.187682475451182,0.549454872801795,0.428736758158132,0,2.25900737046827,3.22227665555024,1.14579102687879,2.57779773515531,1.37016503954128,0,2.02506750069542,1.35096360967266,1.35942722695261,0,1.764384908931,2.39414924040619,0.68293442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| |||
|short_description=p2@Larp7 | |||
}} |
Revision as of 01:28, 14 September 2013
Short description: | p2@Larp7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Larp7_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 122bp_to_ENSMUST00000029588_5end |
EntrezGene: | Larp7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.75e-09 | 13 |
common lymphoid progenitor | 2.75e-09 | 13 |
mature alpha-beta T cell | 5.14e-09 | 9 |
alpha-beta T cell | 5.14e-09 | 9 |
immature T cell | 5.14e-09 | 9 |
mature T cell | 5.14e-09 | 9 |
immature alpha-beta T cell | 5.14e-09 | 9 |
lymphoid lineage restricted progenitor cell | 1.02e-08 | 12 |
CD4-positive, alpha-beta T cell | 4.52e-08 | 8 |
T cell | 7.57e-08 | 11 |
pro-T cell | 7.57e-08 | 11 |
hematopoietic cell | 2.39e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.39e-07 | 32 |
hematopoietic stem cell | 2.39e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.39e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 1.10e-10 | 36 |
thymus | 3.76e-09 | 23 |
neck | 3.76e-09 | 23 |
respiratory system epithelium | 3.76e-09 | 23 |
hemolymphoid system gland | 3.76e-09 | 23 |
pharyngeal epithelium | 3.76e-09 | 23 |
thymic region | 3.76e-09 | 23 |
pharyngeal gland | 3.76e-09 | 23 |
entire pharyngeal arch endoderm | 3.76e-09 | 23 |
thymus primordium | 3.76e-09 | 23 |
early pharyngeal endoderm | 3.76e-09 | 23 |
anterior region of body | 5.50e-09 | 43 |
pharynx | 1.65e-08 | 24 |
gland of gut | 1.65e-08 | 24 |
upper respiratory tract | 1.65e-08 | 24 |
chordate pharynx | 1.65e-08 | 24 |
pharyngeal arch system | 1.65e-08 | 24 |
pharyngeal region of foregut | 1.65e-08 | 24 |
segment of respiratory tract | 1.02e-07 | 27 |
hemopoietic organ | 1.66e-07 | 29 |
immune organ | 1.66e-07 | 29 |
primordium | 2.19e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.