FFCP PHASE1:Hg19::chr7:55053266..55053282,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2898|description=CAGE_peak_at_chr7:55053266..55053282,+|id=chr7:55053266..55053282,+|ontology_enrichment_celltype=CL:0000066!7.88e-08!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000076,1.41e-12,63|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2|ontology_enrichment_disease=DOID:1749!1.79e-35!14;DOID:305!1.05e-14!106;DOID:0050687!1.38e-13!143;DOID:14566!2.22e-09!239;DOID:162!8.58e-09!235;DOID:4556!6.80e-08!3;DOID:7!3.24e-07!39|ontology_enrichment_disease_v019=DOID:1749;4.59e-56;14!DOID:4556;1.26e-08;3|ontology_enrichment_disease_v019_2=DOID:1749,4.38e-56,14;DOID:305,4.30e-13,106;DOID:0050687,1.21e-09,143;DOID:4556,1.21e-08,3|ontology_enrichment_uberon=UBERON:0001264!9.17e-13!10;UBERON:0003922!9.17e-13!10;UBERON:0003923!9.17e-13!10;UBERON:0003924!9.17e-13!10;UBERON:0003921!9.17e-13!10;UBERON:0003343!1.17e-12!4;UBERON:0004785!1.17e-12!4;UBERON:0001045!1.40e-11!11;UBERON:0003729!3.24e-10!5;UBERON:0002075!9.30e-10!18;UBERON:0002114!9.33e-10!12;UBERON:0002108!2.04e-08!14;UBERON:0000344!3.78e-07!12;UBERON:0000997!8.81e-07!1;UBERON:0005056!8.81e-07!1|ontology_enrichment_uberon_v019=UBERON:0000997;3.67e-23;1!UBERON:0005056;3.67e-23;1!UBERON:0004176;3.67e-23;1!UBERON:0003343;4.35e-23;4!UBERON:0004785;4.35e-23;4!UBERON:0000974;9.38e-16;6!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0003729;8.74e-08;13|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.10e-23,1;UBERON:0005056,2.10e-23,1;UBERON:0003343,3.68e-23,4;UBERON:0004785,3.68e-23,4;UBERON:0000974,7.08e-10,10;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3;UBERON:0003729,8.31e-08,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.941798755221676,3.58417289318877,0,0,0,1.95984794828755,0.0870592065804026,0,0,0,0,0.164230914106418,0,0,0,0.137041924646751,0.397429223405979,0,0,0.320635281006135,0,0,0,0,0,3.88947954568004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90738592505128,0,0.366857197043358,1.73288499225507,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,1.07963795609311,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,1.05868461514708,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr7:55053266..55053282,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2898 | |||
|description=CAGE_peak_at_chr7:55053266..55053282,+ | |||
|id=chr7:55053266..55053282,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.88e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.41e-12,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2 | |||
|ontology_enrichment_disease=DOID:1749!1.79e-35!14;DOID:305!1.05e-14!106;DOID:0050687!1.38e-13!143;DOID:14566!2.22e-09!239;DOID:162!8.58e-09!235;DOID:4556!6.80e-08!3;DOID:7!3.24e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.59e-56;14!DOID:4556;1.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.38e-56,14;DOID:305,4.30e-13,106;DOID:0050687,1.21e-09,143;DOID:4556,1.21e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001264!9.17e-13!10;UBERON:0003922!9.17e-13!10;UBERON:0003923!9.17e-13!10;UBERON:0003924!9.17e-13!10;UBERON:0003921!9.17e-13!10;UBERON:0003343!1.17e-12!4;UBERON:0004785!1.17e-12!4;UBERON:0001045!1.40e-11!11;UBERON:0003729!3.24e-10!5;UBERON:0002075!9.30e-10!18;UBERON:0002114!9.33e-10!12;UBERON:0002108!2.04e-08!14;UBERON:0000344!3.78e-07!12;UBERON:0000997!8.81e-07!1;UBERON:0005056!8.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.67e-23;1!UBERON:0005056;3.67e-23;1!UBERON:0004176;3.67e-23;1!UBERON:0003343;4.35e-23;4!UBERON:0004785;4.35e-23;4!UBERON:0000974;9.38e-16;6!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0003729;8.74e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.10e-23,1;UBERON:0005056,2.10e-23,1;UBERON:0003343,3.68e-23,4;UBERON:0004785,3.68e-23,4;UBERON:0000974,7.08e-10,10;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3;UBERON:0003729,8.31e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.941798755221676,3.58417289318877,0,0,0,1.95984794828755,0.0870592065804026,0,0,0,0,0.164230914106418,0,0,0,0.137041924646751,0.397429223405979,0,0,0.320635281006135,0,0,0,0,0,3.88947954568004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90738592505128,0,0.366857197043358,1.73288499225507,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,1.07963795609311,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,1.05868461514708,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr7:55053266..55053282,+ | |||
}} |
Revision as of 01:36, 14 September 2013
Short description: | p@chr7:55053266..55053282, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:55053266..55053282, + |
Coexpression cluster: | C2898_oral_giant_large_epidermoid_squamous_embryonic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.41e-12 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.10e-23 | 1 |
external female genitalia | 2.10e-23 | 1 |
mucosa of oral region | 3.68e-23 | 4 |
respiratory system mucosa | 3.68e-23 | 4 |
neck | 7.08e-10 | 10 |
tongue | 1.12e-08 | 3 |
gustatory system | 1.12e-08 | 3 |
future tongue | 1.12e-08 | 3 |
mouth mucosa | 8.31e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.38e-56 | 14 |
carcinoma | 4.30e-13 | 106 |
cell type cancer | 1.21e-09 | 143 |
lung large cell carcinoma | 1.21e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.