FFCP PHASE1:Hg19::chr7:71802595..71802610,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83698|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13248|TSSclassifier=S|UniProt=E9PFU3|association_with_transcript=125bp_to_ENST00000446128_5end|coexpression_cluster_id=C636|description=CAGE_peak_15_at_CALN1_5end|id=chr7:71802595..71802610,-|ontology_enrichment_celltype=CL:0002322!1.09e-12!5|ontology_enrichment_celltype_v019=CL:0001014;1.14e-13;2!CL:0001016;1.14e-13;2|ontology_enrichment_celltype_v019_2=CL:0001014,9.40e-14,2;CL:0001016,9.40e-14,2|ontology_enrichment_development_v019=UBERON:0006215;6.61e-74;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.76e-29!57;UBERON:0005068!2.76e-29!57;UBERON:0006241!2.76e-29!57;UBERON:0007135!2.76e-29!57;UBERON:0002616!4.08e-28!59;UBERON:0001017!1.68e-26!82;UBERON:0000955!3.77e-25!69;UBERON:0006238!3.77e-25!69;UBERON:0005743!5.44e-25!86;UBERON:0007023!1.34e-24!115;UBERON:0003075!2.90e-23!86;UBERON:0007284!2.90e-23!86;UBERON:0000073!4.74e-22!94;UBERON:0001016!4.74e-22!94;UBERON:0002346!5.86e-22!90;UBERON:0004733!3.06e-20!12;UBERON:0002028!3.06e-20!12;UBERON:0007277!3.06e-20!12;UBERON:0004732!1.41e-18!13;UBERON:0002020!5.74e-18!34;UBERON:0003528!5.74e-18!34;UBERON:0002780!1.29e-16!41;UBERON:0001890!1.29e-16!41;UBERON:0006240!1.29e-16!41;UBERON:0001869!2.81e-16!32;UBERON:0003080!3.79e-16!42;UBERON:0002680!5.77e-16!9;UBERON:0001895!5.77e-16!9;UBERON:0010092!5.77e-16!9;UBERON:0003076!6.50e-16!15;UBERON:0003057!6.50e-16!15;UBERON:0001893!3.49e-15!34;UBERON:0002619!2.13e-14!22;UBERON:0000153!1.57e-13!129;UBERON:0007811!1.57e-13!129;UBERON:0002791!2.27e-13!33;UBERON:0001950!6.96e-13!20;UBERON:0000988!1.09e-12!3;UBERON:0000956!1.63e-12!25;UBERON:0000203!1.63e-12!25;UBERON:0002298!4.71e-12!8;UBERON:0000033!9.27e-12!123;UBERON:0003056!9.50e-12!61;UBERON:0004121!1.07e-11!169;UBERON:0000924!2.82e-11!173;UBERON:0006601!2.82e-11!173;UBERON:0000200!5.39e-10!6;UBERON:0002148!8.19e-09!2;UBERON:0009662!8.19e-09!2;UBERON:0002360!2.23e-08!2;UBERON:0000094!2.23e-08!2;UBERON:0007645!2.23e-08!2;UBERON:0000349!2.31e-07!5;UBERON:0000025!4.65e-07!194;UBERON:0002308!4.80e-07!9;UBERON:0000125!4.80e-07!9;UBERON:0002037!7.30e-07!6;UBERON:0006215!7.30e-07!6|ontology_enrichment_uberon_v019=UBERON:0002370;8.81e-51;2!UBERON:0005058;8.81e-51;2!UBERON:0009113;8.81e-51;2!UBERON:0002680;5.54e-44;9!UBERON:0001895;5.54e-44;9!UBERON:0002037;1.83e-37;6!UBERON:0004733;3.64e-33;12!UBERON:0002028;3.64e-33;12!UBERON:0004732;1.15e-30;13!UBERON:0004177;4.91e-21;5!UBERON:0005057;4.91e-21;5!UBERON:0000988;1.47e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002680,5.54e-44,9;UBERON:0001895,5.54e-44,9;UBERON:0010092,5.54e-44,9;UBERON:0002037,1.72e-37,6;UBERON:0006215,1.72e-37,6;UBERON:0004733,3.64e-33,12;UBERON:0002028,3.64e-33,12;UBERON:0007277,3.64e-33,12;UBERON:0004732,1.15e-30,13;UBERON:0003076,1.15e-26,15;UBERON:0003057,1.15e-26,15;UBERON:0002370,5.23e-26,4;UBERON:0005058,5.23e-26,4;UBERON:0009113,5.23e-26,4;UBERON:0003295,5.23e-26,4;UBERON:0005562,5.23e-26,4;UBERON:0003351,1.03e-17,6;UBERON:0004177,2.47e-15,7;UBERON:0005057,2.47e-15,7;UBERON:0000974,4.89e-11,10;UBERON:0003408,4.89e-11,10;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11;UBERON:0000988,1.54e-09,3;UBERON:0000073,9.60e-08,53;UBERON:0002616,9.60e-08,53;UBERON:0001049,2.35e-07,56;UBERON:0005068,2.35e-07,56;UBERON:0006241,2.35e-07,56;UBERON:0007135,2.35e-07,56|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,1.99042667876204,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83698 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13248 | |||
|TSSclassifier=S | |||
|UniProt=E9PFU3 | |||
|association_with_transcript=125bp_to_ENST00000446128_5end | |||
|coexpression_cluster_id=C636 | |||
|description=CAGE_peak_15_at_CALN1_5end | |||
|id=chr7:71802595..71802610,- | |||
|ontology_enrichment_celltype=CL:0002322!1.09e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.14e-13;2!CL:0001016;1.14e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,9.40e-14,2;CL:0001016,9.40e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.61e-74;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.76e-29!57;UBERON:0005068!2.76e-29!57;UBERON:0006241!2.76e-29!57;UBERON:0007135!2.76e-29!57;UBERON:0002616!4.08e-28!59;UBERON:0001017!1.68e-26!82;UBERON:0000955!3.77e-25!69;UBERON:0006238!3.77e-25!69;UBERON:0005743!5.44e-25!86;UBERON:0007023!1.34e-24!115;UBERON:0003075!2.90e-23!86;UBERON:0007284!2.90e-23!86;UBERON:0000073!4.74e-22!94;UBERON:0001016!4.74e-22!94;UBERON:0002346!5.86e-22!90;UBERON:0004733!3.06e-20!12;UBERON:0002028!3.06e-20!12;UBERON:0007277!3.06e-20!12;UBERON:0004732!1.41e-18!13;UBERON:0002020!5.74e-18!34;UBERON:0003528!5.74e-18!34;UBERON:0002780!1.29e-16!41;UBERON:0001890!1.29e-16!41;UBERON:0006240!1.29e-16!41;UBERON:0001869!2.81e-16!32;UBERON:0003080!3.79e-16!42;UBERON:0002680!5.77e-16!9;UBERON:0001895!5.77e-16!9;UBERON:0010092!5.77e-16!9;UBERON:0003076!6.50e-16!15;UBERON:0003057!6.50e-16!15;UBERON:0001893!3.49e-15!34;UBERON:0002619!2.13e-14!22;UBERON:0000153!1.57e-13!129;UBERON:0007811!1.57e-13!129;UBERON:0002791!2.27e-13!33;UBERON:0001950!6.96e-13!20;UBERON:0000988!1.09e-12!3;UBERON:0000956!1.63e-12!25;UBERON:0000203!1.63e-12!25;UBERON:0002298!4.71e-12!8;UBERON:0000033!9.27e-12!123;UBERON:0003056!9.50e-12!61;UBERON:0004121!1.07e-11!169;UBERON:0000924!2.82e-11!173;UBERON:0006601!2.82e-11!173;UBERON:0000200!5.39e-10!6;UBERON:0002148!8.19e-09!2;UBERON:0009662!8.19e-09!2;UBERON:0002360!2.23e-08!2;UBERON:0000094!2.23e-08!2;UBERON:0007645!2.23e-08!2;UBERON:0000349!2.31e-07!5;UBERON:0000025!4.65e-07!194;UBERON:0002308!4.80e-07!9;UBERON:0000125!4.80e-07!9;UBERON:0002037!7.30e-07!6;UBERON:0006215!7.30e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.81e-51;2!UBERON:0005058;8.81e-51;2!UBERON:0009113;8.81e-51;2!UBERON:0002680;5.54e-44;9!UBERON:0001895;5.54e-44;9!UBERON:0002037;1.83e-37;6!UBERON:0004733;3.64e-33;12!UBERON:0002028;3.64e-33;12!UBERON:0004732;1.15e-30;13!UBERON:0004177;4.91e-21;5!UBERON:0005057;4.91e-21;5!UBERON:0000988;1.47e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,5.54e-44,9;UBERON:0001895,5.54e-44,9;UBERON:0010092,5.54e-44,9;UBERON:0002037,1.72e-37,6;UBERON:0006215,1.72e-37,6;UBERON:0004733,3.64e-33,12;UBERON:0002028,3.64e-33,12;UBERON:0007277,3.64e-33,12;UBERON:0004732,1.15e-30,13;UBERON:0003076,1.15e-26,15;UBERON:0003057,1.15e-26,15;UBERON:0002370,5.23e-26,4;UBERON:0005058,5.23e-26,4;UBERON:0009113,5.23e-26,4;UBERON:0003295,5.23e-26,4;UBERON:0005562,5.23e-26,4;UBERON:0003351,1.03e-17,6;UBERON:0004177,2.47e-15,7;UBERON:0005057,2.47e-15,7;UBERON:0000974,4.89e-11,10;UBERON:0003408,4.89e-11,10;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11;UBERON:0000988,1.54e-09,3;UBERON:0000073,9.60e-08,53;UBERON:0002616,9.60e-08,53;UBERON:0001049,2.35e-07,56;UBERON:0005068,2.35e-07,56;UBERON:0006241,2.35e-07,56;UBERON:0007135,2.35e-07,56 | |||
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|short_description=p15@CALN1 | |||
}} |
Revision as of 01:52, 14 September 2013
Short description: | p15@CALN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_CALN1_5end |
Coexpression cluster: | C636_thymus_skeletal_cerebellum_Hodgkin_temporal_duodenum_parietal |
Association with transcript: | 125bp_to_ENST00000446128_5end |
EntrezGene: | CALN1 |
HGNC: | 13248 |
UniProt: | E9PFU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 9.40e-14 | 2 |
immature CD1a-positive Langerhans cell | 9.40e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 5.54e-44 | 9 |
metencephalon | 5.54e-44 | 9 |
future metencephalon | 5.54e-44 | 9 |
cerebellum | 1.72e-37 | 6 |
rhombic lip | 1.72e-37 | 6 |
segmental subdivision of hindbrain | 3.64e-33 | 12 |
hindbrain | 3.64e-33 | 12 |
presumptive hindbrain | 3.64e-33 | 12 |
segmental subdivision of nervous system | 1.15e-30 | 13 |
posterior neural tube | 1.15e-26 | 15 |
chordal neural plate | 1.15e-26 | 15 |
thymus | 5.23e-26 | 4 |
hemolymphoid system gland | 5.23e-26 | 4 |
thymic region | 5.23e-26 | 4 |
pharyngeal gland | 5.23e-26 | 4 |
thymus primordium | 5.23e-26 | 4 |
pharyngeal epithelium | 1.03e-17 | 6 |
hemopoietic organ | 2.47e-15 | 7 |
immune organ | 2.47e-15 | 7 |
neck | 4.89e-11 | 10 |
gland of gut | 4.89e-11 | 10 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
pharynx | 4.03e-10 | 11 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |
pons | 1.54e-09 | 3 |
regional part of nervous system | 9.60e-08 | 53 |
regional part of brain | 9.60e-08 | 53 |
neural tube | 2.35e-07 | 56 |
neural rod | 2.35e-07 | 56 |
future spinal cord | 2.35e-07 | 56 |
neural keel | 2.35e-07 | 56 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.