FFCP PHASE1:Mm9::chr3:26230856..26230865,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192167|HGNC=|UniProt=Q99K10|association_with_transcript=-25bp_to_NM_138666,uc008otc.1,uc008otd.1_5end|description=CAGE_peak_11_at_Nlgn1_5end|id=chr3:26230856..26230865,-|ontology_enrichment_celltype=CL:0000117!5.96e-15!23;CL:0000337!5.96e-15!23;CL:0000540!3.24e-11!33;CL:0000047!3.24e-11!33;CL:0000031!3.24e-11!33;CL:0000404!3.24e-11!33;CL:0000393!1.37e-08!39;CL:0000211!1.37e-08!39;CL:0002319!4.25e-08!43;CL:0000221!8.79e-08!44;CL:0000133!8.79e-08!44|ontology_enrichment_celltype_v019_2=CL:0002610,1.23e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.56e-24!63;UBERON:0002346!2.14e-23!71;UBERON:0003075!2.14e-23!71;UBERON:0007284!2.14e-23!71;UBERON:0003056!8.28e-23!49;UBERON:0001049!5.55e-20!52;UBERON:0005068!5.55e-20!52;UBERON:0006241!5.55e-20!52;UBERON:0007135!5.55e-20!52;UBERON:0001017!7.05e-20!73;UBERON:0005743!7.05e-20!73;UBERON:0004121!4.25e-19!102;UBERON:0000924!4.25e-19!102;UBERON:0006601!4.25e-19!102;UBERON:0000955!4.43e-19!50;UBERON:0006238!4.43e-19!50;UBERON:0000073!5.19e-19!75;UBERON:0001016!5.19e-19!75;UBERON:0002020!4.15e-18!34;UBERON:0002616!4.46e-18!49;UBERON:0007811!2.30e-15!86;UBERON:0003080!2.59e-15!40;UBERON:0002780!2.48e-14!39;UBERON:0001890!2.48e-14!39;UBERON:0006240!2.48e-14!39;UBERON:0000153!7.28e-14!94;UBERON:0002791!1.79e-13!29;UBERON:0003528!1.79e-13!29;UBERON:0001893!1.79e-13!29;UBERON:0000956!2.16e-11!21;UBERON:0001869!2.16e-11!21;UBERON:0000203!2.16e-11!21;UBERON:0000970!4.82e-09!9;UBERON:0000019!4.82e-09!9;UBERON:0000047!4.82e-09!9;UBERON:0004088!4.82e-09!9;UBERON:0002104!4.82e-09!9;UBERON:0001456!4.82e-09!9;UBERON:0003072!4.82e-09!9;UBERON:0003071!4.82e-09!9;UBERON:0004128!4.82e-09!9;UBERON:0002619!2.19e-07!17;UBERON:0001444!4.80e-07!11;UBERON:0002240!5.04e-07!6;UBERON:0005174!5.04e-07!6;UBERON:0001137!5.04e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.23e-15,3;UBERON:0002275,1.23e-15,3;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.841299845405528,0.285650984403804,0.220868540951614,0.489963196859816,0.0958454710182364,0,2.20231761998777,0.893811366596314,1.22885226604995,0.395658863190582,0.182975287204819,0.52091337055676,0,0,0.916789486660861,0.294628585473668,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0.125654352112864,0.695297280769106,0.255715457330331,0.62336413367868,0.324482526135515,0,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.90422890701429,1.76894897793452,1.2811372028485,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,0,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,2.07104124700728,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.384150914429216,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p11@Nlgn1}} | ||
|EntrezGene=192167 | |||
|HGNC= | |||
|UniProt=Q99K10 | |||
|association_with_transcript=-25bp_to_NM_138666,uc008otc.1,uc008otd.1_5end | |||
|description=CAGE_peak_11_at_Nlgn1_5end | |||
|id=chr3:26230856..26230865,- | |||
|ontology_enrichment_celltype=CL:0000117!5.96e-15!23;CL:0000337!5.96e-15!23;CL:0000540!3.24e-11!33;CL:0000047!3.24e-11!33;CL:0000031!3.24e-11!33;CL:0000404!3.24e-11!33;CL:0000393!1.37e-08!39;CL:0000211!1.37e-08!39;CL:0002319!4.25e-08!43;CL:0000221!8.79e-08!44;CL:0000133!8.79e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.23e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.56e-24!63;UBERON:0002346!2.14e-23!71;UBERON:0003075!2.14e-23!71;UBERON:0007284!2.14e-23!71;UBERON:0003056!8.28e-23!49;UBERON:0001049!5.55e-20!52;UBERON:0005068!5.55e-20!52;UBERON:0006241!5.55e-20!52;UBERON:0007135!5.55e-20!52;UBERON:0001017!7.05e-20!73;UBERON:0005743!7.05e-20!73;UBERON:0004121!4.25e-19!102;UBERON:0000924!4.25e-19!102;UBERON:0006601!4.25e-19!102;UBERON:0000955!4.43e-19!50;UBERON:0006238!4.43e-19!50;UBERON:0000073!5.19e-19!75;UBERON:0001016!5.19e-19!75;UBERON:0002020!4.15e-18!34;UBERON:0002616!4.46e-18!49;UBERON:0007811!2.30e-15!86;UBERON:0003080!2.59e-15!40;UBERON:0002780!2.48e-14!39;UBERON:0001890!2.48e-14!39;UBERON:0006240!2.48e-14!39;UBERON:0000153!7.28e-14!94;UBERON:0002791!1.79e-13!29;UBERON:0003528!1.79e-13!29;UBERON:0001893!1.79e-13!29;UBERON:0000956!2.16e-11!21;UBERON:0001869!2.16e-11!21;UBERON:0000203!2.16e-11!21;UBERON:0000970!4.82e-09!9;UBERON:0000019!4.82e-09!9;UBERON:0000047!4.82e-09!9;UBERON:0004088!4.82e-09!9;UBERON:0002104!4.82e-09!9;UBERON:0001456!4.82e-09!9;UBERON:0003072!4.82e-09!9;UBERON:0003071!4.82e-09!9;UBERON:0004128!4.82e-09!9;UBERON:0002619!2.19e-07!17;UBERON:0001444!4.80e-07!11;UBERON:0002240!5.04e-07!6;UBERON:0005174!5.04e-07!6;UBERON:0001137!5.04e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.23e-15,3;UBERON:0002275,1.23e-15,3;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,0,0,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.841299845405528,0.285650984403804,0.220868540951614,0.489963196859816,0.0958454710182364,0,2.20231761998777,0.893811366596314,1.22885226604995,0.395658863190582,0.182975287204819,0.52091337055676,0,0,0.916789486660861,0.294628585473668,0.854230084794618,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0.125654352112864,0.695297280769106,0.255715457330331,0.62336413367868,0.324482526135515,0,0,0,0,0.390361328888111,0.229902104433473,0.360124259610698,0.90422890701429,1.76894897793452,1.2811372028485,0.937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,0,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,2.07104124700728,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.384150914429216,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p11@Nlgn1 | |||
}} |
Revision as of 02:02, 14 September 2013
Short description: | p11@Nlgn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Nlgn1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_138666, uc008otc.1, uc008otd.1_5end |
EntrezGene: | Nlgn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.23e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.23e-15 | 3 |
reticular formation | 1.23e-15 | 3 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.