FFCP PHASE1:Mm9::chr3:88356783..88356880,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=83409|HGNC=|MCL_coexpression_id=3085|UniProt=Q9JHS3|association_with_transcript=0bp_to_ENSMUST00000156421,NM_031248,uc008pvo.1,uc008pvp.1_5end|description=CAGE_peak_1_at_Lamtor2_5end|id=chr3:88356783..88356880,-|ontology_enrichment_celltype=CL:0002321!1.23e-07!70;CL:0000220!1.23e-07!70;CL:0002371!7.66e-07!118|ontology_enrichment_celltype_v019_2=CL:0002321,1.23e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.79e-10!43;UBERON:0005409!7.64e-08!59|ontology_enrichment_uberon_v019_2=|phase1_expression=87.7615682134271,114.114958298071,105.104824298983,90.1343349694354,78.1397338716302,93.6766337268345,81.0635862866474,65.4655249848792,9.29205566201001,11.2350972634557,17.977886663678,17.310558501988,71.7331058411752,72.7337748126058,47.3015861778241,32.8009933171518,35.6776557845355,64.6697438984387,61.8386095561882,66.2047856804927,54.5977922769868,68.5107563286109,66.3447464412896,93.4355749113495,94.9754423618084,142.409527100525,146.889840690245,128.205383448104,121.614988452079,95.5194191790138,114.412943498137,34.9266870402797,25.8327210785519,15.8481681015439,97.3429958561795,105.060295866567,90.0386861117048,118.444451498545,173.456446484284,197.891975222096,175.292983433242,174.176598664404,235.958031573141,79.6926857785404,75.5258137585383,71.5832333430558,227.675881205279,137.137823363301,165.423695599057,142.322686122375,120.248336176186,136.564936146723,70.8042597563647,55.8528849348735,47.053131879945,83.8665761477187,106.01737277734,107.775467285985,84.7705971001715,91.5154394140617,84.2995766663218,134.182434699376,141.397872581671,272.669614336264,325.337033284535,327.531332990152,172.270063548083,219.388652338608,66.4650414897342,77.8984264173855,80.1338102748766,102.834354385369,117.943800868162,81.8238538755893,86.6443058004857,58.8300023430413,100.205451709444,105.086679244109,115.819326075208,91.2653111092941,111.523437551337,99.4944537763411,146.012708477722,145.755515998205,112.459510363732,76.8980608086273,79.5857695666985,87.0485412004154,53.1597877198952,81.0127124344741,49.8566920566886,103.250865237766,131.914438739304,232.612075595899,192.983595981958,180.554835500226,103.367093216969,83.1699974180922,92.7436036432241,98.5817412883849,99.4354543623364,35.931413676009,22.9324715735981,7.11066703153331,90.2767641016763,94.5032298222118,72.7955200821288,96.7137461220438,64.7344709117929,67.3927311354305,66.6183654781962,61.5020266190525,81.8685015259008,96.4624899536784,53.1500956253386,91.2339453053444,45.7310690308592,71.4320823184364,54.8458542208922,69.2362117774911,61.3939421319894,66.9127849326607,130.474232852686,52.1149818680554,60.1112048554616,107.0365061324,73.686301571141,128.979087163583,98.8606366628443,68.0049502897895,64.5075849974263,68.7329306057368,70.9203226384488,68.7874580218589,70.0245710165718,85.014421847505,48.2718584650499,68.4238338355512,120.801478531297,69.2353705866499,64.0192579376502,71.7294565832435,57.9800057973224,70.6805595649504,47.3534034093242,62.263268058437,62.873857179578,53.2928943722372,44.1914385512327,40.4687011559133,39.7649540610524,50.1958227259146,58.9460168358268,59.8993726418126,68.3196692874372,63.0938625814623,144.655916586526,136.651738677914,110.25543776549,68.1443791641801,74.8138131339697,72.384948707328,53.0308207710871,76.7380503814875,80.0646315885493,75.3409980991322,74.8482789904938,62.002396796967,76.3557703598549,80.4420573987567,71.1784147812613,78.8017932222541,76.4034401212856,72.20305329308,78.0175709172912,67.7112349455692,127.87206901473,77.4840160324185,61.6403044046826,50.6275944655756,56.8305504430432,81.0767768985837,103.405790387865,111.47221690196,119.106794447672,119.07734426546,134.464336708144,106.839625486098,107.425212002635,100.667773769273,141.35428461805,124.662437057234,54.2450196725814,66.3783858262524,51.845558409617,66.1866815497271,71.9563727391891,55.8982484525839,98.2695786910958,132.406302737703,153.701754556706,127.345873167298,152.969555576969,51.7219827719892,48.5500717929611,53.2923206352103,59.4380155668314,65.6001874526574,79.1886399040216,82.5687914483827,49.9376498467109,133.711408222596,66.1333750025831,135.087164003667,177.23739832907,136.897751847335,162.354659237331,123.987984990385,58.0125017123139,64.4270800019648,52.6376873907744,55.6763881342617,68.2948622519541,52.5969648367301,55.9402556082132,36.0997248536928,55.8028410135916,62.010113101657,56.6064428734079,59.8101098712444,78.2262967852507,59.4507630770013,158.330848136236,134.88860958704,125.891653892873,70.0879335614021,86.2156668234443,82.0481806145422,70.8198964027238,98.4636616097055,60.262069908505,71.0598514619882,68.7200638767629,61.4149810738059,59.2644473059168,59.7291479964436,76.1044119148801,74.5252437673845,61.2696055817111,47.2342335140056,51.808131101018,66.7746013752207,39.4186441635654,50.8107978755409,110.178464822169,69.6780425764797,89.1854493046016,175.779934332497,187.516701979291,148.491176456917,73.9104918461112,10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| ||
|EntrezGene=83409 | |||
|HGNC= | |||
|MCL_coexpression_id=3085 | |||
|UniProt=Q9JHS3 | |||
|association_with_transcript=0bp_to_ENSMUST00000156421,NM_031248,uc008pvo.1,uc008pvp.1_5end | |||
|description=CAGE_peak_1_at_Lamtor2_5end | |||
|id=chr3:88356783..88356880,- | |||
|ontology_enrichment_celltype=CL:0002321!1.23e-07!70;CL:0000220!1.23e-07!70;CL:0002371!7.66e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.23e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.79e-10!43;UBERON:0005409!7.64e-08!59 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=87.7615682134271,114.114958298071,105.104824298983,90.1343349694354,78.1397338716302,93.6766337268345,81.0635862866474,65.4655249848792,9.29205566201001,11.2350972634557,17.977886663678,17.310558501988,71.7331058411752,72.7337748126058,47.3015861778241,32.8009933171518,35.6776557845355,64.6697438984387,61.8386095561882,66.2047856804927,54.5977922769868,68.5107563286109,66.3447464412896,93.4355749113495,94.9754423618084,142.409527100525,146.889840690245,128.205383448104,121.614988452079,95.5194191790138,114.412943498137,34.9266870402797,25.8327210785519,15.8481681015439,97.3429958561795,105.060295866567,90.0386861117048,118.444451498545,173.456446484284,197.891975222096,175.292983433242,174.176598664404,235.958031573141,79.6926857785404,75.5258137585383,71.5832333430558,227.675881205279,137.137823363301,165.423695599057,142.322686122375,120.248336176186,136.564936146723,70.8042597563647,55.8528849348735,47.053131879945,83.8665761477187,106.01737277734,107.775467285985,84.7705971001715,91.5154394140617,84.2995766663218,134.182434699376,141.397872581671,272.669614336264,325.337033284535,327.531332990152,172.270063548083,219.388652338608,66.4650414897342,77.8984264173855,80.1338102748766,102.834354385369,117.943800868162,81.8238538755893,86.6443058004857,58.8300023430413,100.205451709444,105.086679244109,115.819326075208,91.2653111092941,111.523437551337,99.4944537763411,146.012708477722,145.755515998205,112.459510363732,76.8980608086273,79.5857695666985,87.0485412004154,53.1597877198952,81.0127124344741,49.8566920566886,103.250865237766,131.914438739304,232.612075595899,192.983595981958,180.554835500226,103.367093216969,83.1699974180922,92.7436036432241,98.5817412883849,99.4354543623364,35.931413676009,22.9324715735981,7.11066703153331,90.2767641016763,94.5032298222118,72.7955200821288,96.7137461220438,64.7344709117929,67.3927311354305,66.6183654781962,61.5020266190525,81.8685015259008,96.4624899536784,53.1500956253386,91.2339453053444,45.7310690308592,71.4320823184364,54.8458542208922,69.2362117774911,61.3939421319894,66.9127849326607,130.474232852686,52.1149818680554,60.1112048554616,107.0365061324,73.686301571141,128.979087163583,98.8606366628443,68.0049502897895,64.5075849974263,68.7329306057368,70.9203226384488,68.7874580218589,70.0245710165718,85.014421847505,48.2718584650499,68.4238338355512,120.801478531297,69.2353705866499,64.0192579376502,71.7294565832435,57.9800057973224,70.6805595649504,47.3534034093242,62.263268058437,62.873857179578,53.2928943722372,44.1914385512327,40.4687011559133,39.7649540610524,50.1958227259146,58.9460168358268,59.8993726418126,68.3196692874372,63.0938625814623,144.655916586526,136.651738677914,110.25543776549,68.1443791641801,74.8138131339697,72.384948707328,53.0308207710871,76.7380503814875,80.0646315885493,75.3409980991322,74.8482789904938,62.002396796967,76.3557703598549,80.4420573987567,71.1784147812613,78.8017932222541,76.4034401212856,72.20305329308,78.0175709172912,67.7112349455692,127.87206901473,77.4840160324185,61.6403044046826,50.6275944655756,56.8305504430432,81.0767768985837,103.405790387865,111.47221690196,119.106794447672,119.07734426546,134.464336708144,106.839625486098,107.425212002635,100.667773769273,141.35428461805,124.662437057234,54.2450196725814,66.3783858262524,51.845558409617,66.1866815497271,71.9563727391891,55.8982484525839,98.2695786910958,132.406302737703,153.701754556706,127.345873167298,152.969555576969,51.7219827719892,48.5500717929611,53.2923206352103,59.4380155668314,65.6001874526574,79.1886399040216,82.5687914483827,49.9376498467109,133.711408222596,66.1333750025831,135.087164003667,177.23739832907,136.897751847335,162.354659237331,123.987984990385,58.0125017123139,64.4270800019648,52.6376873907744,55.6763881342617,68.2948622519541,52.5969648367301,55.9402556082132,36.0997248536928,55.8028410135916,62.010113101657,56.6064428734079,59.8101098712444,78.2262967852507,59.4507630770013,158.330848136236,134.88860958704,125.891653892873,70.0879335614021,86.2156668234443,82.0481806145422,70.8198964027238,98.4636616097055,60.262069908505,71.0598514619882,68.7200638767629,61.4149810738059,59.2644473059168,59.7291479964436,76.1044119148801,74.5252437673845,61.2696055817111,47.2342335140056,51.808131101018,66.7746013752207,39.4186441635654,50.8107978755409,110.178464822169,69.6780425764797,89.1854493046016,175.779934332497,187.516701979291,148.491176456917,73.9104918461112,100.335309335792,110.514187299264,161.810820063138,167.615587634248,176.3617789544,70.1305587852803,67.5229102617413,78.6500797399147,72.6602548757098,57.4582357000966,63.6776678839392,71.9079220031269,64.2421042631805,56.0865382272268,68.8454230307416,163.411542958727,66.6140461883579,56.0281560634792,65.7410881716899,64.9385551377062,56.300328612556,122.713432221167,81.9579834886453,63.2222258952055,73.4737249949072,55.5583582109135,57.4523793864308,51.5337238508265,49.1873072394024,52.3533564381074,52.3418431690481,44.36219159122,147.019275174327,52.35360693767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| |||
|short_description=p1@Lamtor2 | |||
}} | |||
Revision as of 02:47, 14 September 2013
| Short description: | p1@Lamtor2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Lamtor2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3085 |
| Association with transcript: | 0bp_to_ENSMUST00000156421, NM_031248, uc008pvo.1, uc008pvp.1_5end |
| EntrezGene: | Lamtor2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 1.23e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
