FFCP PHASE1:Hg19::chr8:117886399..117886420,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5885|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9811|TSSclassifier=S|UniProt=|association_with_transcript=146bp_to_ENST00000523547_5end|coexpression_cluster_id=C17|description=CAGE_peak_25_at_RAD21_5end|id=chr8:117886399..117886420,-|ontology_enrichment_celltype=CL:0002615!6.46e-09!3;CL:0002150!1.90e-07!3;CL:0000861!1.90e-07!3|ontology_enrichment_celltype_v019=CL:0002615;2.38e-27;3!CL:0002581;2.54e-21;1!CL:0002616;5.71e-21;1!CL:0000136;2.33e-14;13!CL:0000047;3.52e-11;2!CL:0002579;7.02e-08;3!CL:0002334;1.42e-07;12|ontology_enrichment_celltype_v019_2=CL:0002615,3.56e-27,3;CL:0002581,2.30e-21,1;CL:0002616,3.45e-21,1;CL:0000136,1.58e-12,15;CL:0002579,6.34e-08,3;CL:0002334,1.33e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.87e-16!9;UBERON:0001557!9.97e-13!19;UBERON:0003688!2.55e-11!6;UBERON:0002358!2.55e-11!6;UBERON:0003684!2.55e-11!6;UBERON:0001178!2.55e-11!6|ontology_enrichment_uberon_v019=UBERON:0005406;2.01e-40;2!UBERON:0003688;3.23e-30;6!UBERON:0002358;3.23e-30;6!UBERON:0003684;3.23e-30;6!UBERON:0001178;3.23e-30;6!UBERON:0004457;2.04e-20;9!UBERON:0000042;2.04e-20;9|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.10e-40,2;UBERON:0003688,3.76e-30,6;UBERON:0002358,3.76e-30,6;UBERON:0003684,3.76e-30,6;UBERON:0001178,3.76e-30,6;UBERON:0004457,1.83e-15,12;UBERON:0000042,1.83e-15,12|phase1_expression=0.181678379270557,0,2.39622486963151,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,1.20505514941741,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0377839874444,0.704387472105808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,1.40953064181271,0,0.64341568457443,2.96836132889982,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,16.0455310177275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.627921025580099,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.19351266257817,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0.926404341482917,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.594600453887843,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p25@RAD21}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=146bp_to_ENST00000523547_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_25_at_RAD21_5end | |||
|id=chr8:117886399..117886420,- | |||
|ontology_enrichment_celltype=CL:0002615!6.46e-09!3;CL:0002150!1.90e-07!3;CL:0000861!1.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002615;2.38e-27;3!CL:0002581;2.54e-21;1!CL:0002616;5.71e-21;1!CL:0000136;2.33e-14;13!CL:0000047;3.52e-11;2!CL:0002579;7.02e-08;3!CL:0002334;1.42e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.56e-27,3;CL:0002581,2.30e-21,1;CL:0002616,3.45e-21,1;CL:0000136,1.58e-12,15;CL:0002579,6.34e-08,3;CL:0002334,1.33e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.87e-16!9;UBERON:0001557!9.97e-13!19;UBERON:0003688!2.55e-11!6;UBERON:0002358!2.55e-11!6;UBERON:0003684!2.55e-11!6;UBERON:0001178!2.55e-11!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.01e-40;2!UBERON:0003688;3.23e-30;6!UBERON:0002358;3.23e-30;6!UBERON:0003684;3.23e-30;6!UBERON:0001178;3.23e-30;6!UBERON:0004457;2.04e-20;9!UBERON:0000042;2.04e-20;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.10e-40,2;UBERON:0003688,3.76e-30,6;UBERON:0002358,3.76e-30,6;UBERON:0003684,3.76e-30,6;UBERON:0001178,3.76e-30,6;UBERON:0004457,1.83e-15,12;UBERON:0000042,1.83e-15,12 | |||
|phase1_expression=0.181678379270557,0,2.39622486963151,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,1.20505514941741,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.0377839874444,0.704387472105808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,1.40953064181271,0,0.64341568457443,2.96836132889982,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,16.0455310177275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.627921025580099,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.19351266257817,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0.926404341482917,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0.594600453887843,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@RAD21 | |||
}} |
Revision as of 03:16, 14 September 2013
Short description: | p25@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_RAD21_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 146bp_to_ENST00000523547_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.56e-27 | 3 |
perirenal preadipocyte | 2.30e-21 | 1 |
perirenal adipocyte cell | 3.45e-21 | 1 |
fat cell | 1.58e-12 | 15 |
omentum preadipocyte | 6.34e-08 | 3 |
preadipocyte | 1.33e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.10e-40 | 2 |
omentum | 3.76e-30 | 6 |
peritoneum | 3.76e-30 | 6 |
abdominal cavity | 3.76e-30 | 6 |
visceral peritoneum | 3.76e-30 | 6 |
cavity lining | 1.83e-15 | 12 |
serous membrane | 1.83e-15 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.