FFCP PHASE1:Mm9::chr5:109985549..109985572,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=161|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:109985549..109985572,-|id=chr5:109985549..109985572,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,2.59e-16,3;CL:0000351,2.59e-16,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!4.94e-07!24;UBERON:0005156!7.18e-07!26;UBERON:0000990!7.18e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.82e-16,3;UBERON:0000478,1.82e-16,3;UBERON:0000158,1.82e-16,3;UBERON:0000358,2.59e-16,3;UBERON:0000307,2.59e-16,3;UBERON:0007010,2.59e-16,3;UBERON:0001987,1.73e-11,2;UBERON:0003124,1.73e-11,2;UBERON:0004340,1.73e-11,2;UBERON:0007023,9.74e-07,51|phase1_expression=0,2.09385244583617,0.909998478779072,0,0,0,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.17008658030214,0.198581902401771,0.522399578277871,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.861884930743556,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0,0,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0.768032666281217,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.61119299110724,0.294628585473668,0,0,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.593768556259299,0,0.608930956624282,0,0.60289056221049,0.117588707135705,0.251333182659351,8.89901883843746,0.144599356919912,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0.479260498023681,0,0.254140454146129,2.24685959107234,0.915001205637253,0,0.173824320192276,0,1.24672826735736,0.811206315338788,0.203678727700633,0.124406970610093,0.758168275301024,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0.201683524623343,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,1.10374698521893,1.12385412991454,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92810586933792,19.0648863777438,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0.559805809294632,0.829199842826543,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0.66183396182839,0,0.258319646955462,0.337912250981556,0.234714477291508,0.5208175393758,0.838874755405687,0.966336483304024,0.864090018773596,0,0,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,5.32766288097755,5.29311753995907,6.88326927092722,0.772758376128762,0.93841237725591,0.183151624267265,0,0,1.6942555278512,0,0.572895513439397,0.515559547031063,0,0,0,2.70192721934532,0.906284817968409,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0,0|short_description=p@chr5:109985549..109985572,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=161 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:109985549..109985572,- | |||
|id=chr5:109985549..109985572,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.59e-16,3;CL:0000351,2.59e-16,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!4.94e-07!24;UBERON:0005156!7.18e-07!26;UBERON:0000990!7.18e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.82e-16,3;UBERON:0000478,1.82e-16,3;UBERON:0000158,1.82e-16,3;UBERON:0000358,2.59e-16,3;UBERON:0000307,2.59e-16,3;UBERON:0007010,2.59e-16,3;UBERON:0001987,1.73e-11,2;UBERON:0003124,1.73e-11,2;UBERON:0004340,1.73e-11,2;UBERON:0007023,9.74e-07,51 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,0,0,0,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.17008658030214,0.198581902401771,0.522399578277871,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,0.861884930743556,0,0,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0,0,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0.768032666281217,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,0.61119299110724,0.294628585473668,0,0,0,0,1.44932244350839,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.593768556259299,0,0.608930956624282,0,0.60289056221049,0.117588707135705,0.251333182659351,8.89901883843746,0.144599356919912,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0.479260498023681,0,0.254140454146129,2.24685959107234,0.915001205637253,0,0.173824320192276,0,1.24672826735736,0.811206315338788,0.203678727700633,0.124406970610093,0.758168275301024,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0,0,0,0.201683524623343,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,1.10374698521893,1.12385412991454,0.820481806145422,0,0,0.315508219416257,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92810586933792,19.0648863777438,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0.169978429993855,0.559805809294632,0.829199842826543,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0.66183396182839,0,0.258319646955462,0.337912250981556,0.234714477291508,0.5208175393758,0.838874755405687,0.966336483304024,0.864090018773596,0,0,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.226730383615211,5.32766288097755,5.29311753995907,6.88326927092722,0.772758376128762,0.93841237725591,0.183151624267265,0,0,1.6942555278512,0,0.572895513439397,0.515559547031063,0,0,0,2.70192721934532,0.906284817968409,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr5:109985549..109985572,- | |||
}} |
Revision as of 05:54, 14 September 2013
Short description: | p@chr5:109985549..109985572, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:109985549..109985572, - |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.59e-16 | 3 |
trophoblast cell | 2.59e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.82e-16 | 3 |
extraembryonic structure | 1.82e-16 | 3 |
membranous layer | 1.82e-16 | 3 |
blastocyst | 2.59e-16 | 3 |
blastula | 2.59e-16 | 3 |
cleaving embryo | 2.59e-16 | 3 |
placenta | 1.73e-11 | 2 |
chorion | 1.73e-11 | 2 |
allantois | 1.73e-11 | 2 |
adult organism | 9.74e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.