FFCP PHASE1:Mm9::chr5:120998338..120998349,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=161|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:120998338..120998349,-|id=chr5:120998338..120998349,-|ontology_enrichment_celltype=CL:0000349!2.06e-27!3;CL:0000351!2.06e-27!3|ontology_enrichment_celltype_v019_2=CL:0000349,3.69e-52,3;CL:0000351,3.69e-52,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!2.06e-27!3;UBERON:0000307!2.06e-27!3;UBERON:0001987!3.79e-19!2;UBERON:0003124!3.79e-19!2;UBERON:0004340!3.79e-19!2;UBERON:0005631!4.20e-13!3;UBERON:0000478!4.20e-13!3;UBERON:0000158!4.20e-13!3;UBERON:0005795!4.61e-10!4;UBERON:0000995!4.61e-10!4;UBERON:0003975!3.15e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.69e-52,3;UBERON:0000307,3.69e-52,3;UBERON:0007010,3.69e-52,3;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0005631,2.28e-24,3;UBERON:0000478,2.28e-24,3;UBERON:0000158,2.28e-24,3;UBERON:0005795,1.43e-18,4;UBERON:0000995,1.43e-18,4;UBERON:0003975,4.39e-15,5;UBERON:0003134,8.03e-10,8;UBERON:0004175,7.68e-09,9;UBERON:0000474,7.68e-09,9;UBERON:0003100,2.08e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91752490642099,4.66030555900404,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32978930061097,3.3194126945506,4.86865387455827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:120998338..120998349,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=161 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:120998338..120998349,- | |||
|id=chr5:120998338..120998349,- | |||
|ontology_enrichment_celltype=CL:0000349!2.06e-27!3;CL:0000351!2.06e-27!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.69e-52,3;CL:0000351,3.69e-52,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!2.06e-27!3;UBERON:0000307!2.06e-27!3;UBERON:0001987!3.79e-19!2;UBERON:0003124!3.79e-19!2;UBERON:0004340!3.79e-19!2;UBERON:0005631!4.20e-13!3;UBERON:0000478!4.20e-13!3;UBERON:0000158!4.20e-13!3;UBERON:0005795!4.61e-10!4;UBERON:0000995!4.61e-10!4;UBERON:0003975!3.15e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,3.69e-52,3;UBERON:0000307,3.69e-52,3;UBERON:0007010,3.69e-52,3;UBERON:0001987,6.35e-36,2;UBERON:0003124,6.35e-36,2;UBERON:0004340,6.35e-36,2;UBERON:0005631,2.28e-24,3;UBERON:0000478,2.28e-24,3;UBERON:0000158,2.28e-24,3;UBERON:0005795,1.43e-18,4;UBERON:0000995,1.43e-18,4;UBERON:0003975,4.39e-15,5;UBERON:0003134,8.03e-10,8;UBERON:0004175,7.68e-09,9;UBERON:0000474,7.68e-09,9;UBERON:0003100,2.08e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.91752490642099,4.66030555900404,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32978930061097,3.3194126945506,4.86865387455827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:120998338..120998349,- | |||
}} |
Revision as of 06:14, 14 September 2013
Short description: | p@chr5:120998338..120998349, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:120998338..120998349, - |
Coexpression cluster: | MCL_coexpression_mm9:161 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.69e-52 | 3 |
trophoblast cell | 3.69e-52 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 3.69e-52 | 3 |
blastula | 3.69e-52 | 3 |
cleaving embryo | 3.69e-52 | 3 |
placenta | 6.35e-36 | 2 |
chorion | 6.35e-36 | 2 |
allantois | 6.35e-36 | 2 |
extraembryonic membrane | 2.28e-24 | 3 |
extraembryonic structure | 2.28e-24 | 3 |
membranous layer | 2.28e-24 | 3 |
embryonic uterus | 1.43e-18 | 4 |
uterus | 1.43e-18 | 4 |
internal female genitalia | 4.39e-15 | 5 |
female reproductive organ | 8.03e-10 | 8 |
internal genitalia | 7.68e-09 | 9 |
female reproductive system | 7.68e-09 | 9 |
female organism | 2.08e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.