FFCP PHASE1:Hg19::chr9:107651889..107651907,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=19|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29|TSSclassifier=N|UniProt=O95477|association_with_transcript=-413bp_to_AF165281,AJ012376_5end|coexpression_cluster_id=C55|description=CAGE_peak_10_at_ABCA1_5end|id=chr9:107651889..107651907,-|ontology_enrichment_celltype=CL:0002322!8.25e-15!5;CL:0000181!2.37e-11!12;CL:0000417!2.37e-11!12;CL:0000668!2.37e-11!12;CL:0000414!2.37e-11!12;CL:0000412!2.37e-11!12;CL:0000182!2.37e-11!12;CL:0002563!5.30e-09!4;CL:0000148!1.16e-07!10;CL:0000541!1.16e-07!10|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12|ontology_enrichment_development_v019=UBERON:0004161;2.69e-48;11!UBERON:0009497;5.29e-41;13!UBERON:0001041;3.35e-18;30!UBERON:0003104;1.89e-17;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;8.29e-09;39|ontology_enrichment_disease_v019_2=DOID:7,2.02e-08,39|ontology_enrichment_uberon=UBERON:0002107!3.28e-15!19;UBERON:0006925!3.28e-15!19;UBERON:0008836!3.28e-15!19;UBERON:0008835!4.52e-13!22;UBERON:0003894!4.52e-13!22;UBERON:0009854!1.76e-12!23;UBERON:0007499!1.92e-11!25;UBERON:0009497!1.92e-11!25;UBERON:0000015!1.92e-11!25;UBERON:0002423!1.92e-11!25;UBERON:0006235!1.92e-11!25;UBERON:0004161!1.92e-11!25;UBERON:0005057!5.53e-11!26;UBERON:0009856!5.53e-11!26;UBERON:0003929!6.75e-11!54;UBERON:0000989!1.69e-09!1;UBERON:0008811!1.69e-09!1;UBERON:0006258!1.69e-09!1;UBERON:0005876!1.69e-09!1;UBERON:0004874!1.69e-09!1;UBERON:0002365!3.96e-09!31;UBERON:0002330!3.96e-09!31;UBERON:0001242!5.30e-09!4;UBERON:0001262!5.30e-09!4;UBERON:0004786!5.30e-09!4;UBERON:0004808!5.30e-09!4;UBERON:0001277!5.30e-09!4;UBERON:0002368!5.02e-08!35;UBERON:0003350!2.28e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;2.58e-28;19!UBERON:0006925;2.58e-28;19!UBERON:0002423;1.06e-21;25!UBERON:0002365;5.97e-16;31!UBERON:0002330;5.97e-16;31!UBERON:0002368;6.04e-16;33!UBERON:0000949;1.33e-10;43!UBERON:0002417;6.08e-07;58!UBERON:0000916;6.08e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.49e-28,19;UBERON:0006925,2.49e-28,19;UBERON:0008836,2.49e-28,19;UBERON:0008835,1.43e-24,22;UBERON:0003894,1.43e-24,22;UBERON:0009854,1.55e-23,23;UBERON:0007499,1.03e-21,25;UBERON:0009497,1.03e-21,25;UBERON:0000015,1.03e-21,25;UBERON:0002423,1.03e-21,25;UBERON:0006235,1.03e-21,25;UBERON:0004161,1.03e-21,25;UBERON:0009856,6.62e-21,26;UBERON:0002365,1.20e-17,31;UBERON:0002330,1.20e-17,31;UBERON:0002368,1.05e-15,35;UBERON:0000949,2.36e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0002530,1.49e-09,59;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0005911,5.19e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54524320382506,3.21421847686549,3.77459845583435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@ABCA1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=19 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29 | |||
|TSSclassifier=N | |||
|UniProt=O95477 | |||
|association_with_transcript=-413bp_to_AF165281,AJ012376_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_10_at_ABCA1_5end | |||
|id=chr9:107651889..107651907,- | |||
|ontology_enrichment_celltype=CL:0002322!8.25e-15!5;CL:0000181!2.37e-11!12;CL:0000417!2.37e-11!12;CL:0000668!2.37e-11!12;CL:0000414!2.37e-11!12;CL:0000412!2.37e-11!12;CL:0000182!2.37e-11!12;CL:0002563!5.30e-09!4;CL:0000148!1.16e-07!10;CL:0000541!1.16e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.41e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-25,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.69e-48;11!UBERON:0009497;5.29e-41;13!UBERON:0001041;3.35e-18;30!UBERON:0003104;1.89e-17;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;8.29e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.02e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!3.28e-15!19;UBERON:0006925!3.28e-15!19;UBERON:0008836!3.28e-15!19;UBERON:0008835!4.52e-13!22;UBERON:0003894!4.52e-13!22;UBERON:0009854!1.76e-12!23;UBERON:0007499!1.92e-11!25;UBERON:0009497!1.92e-11!25;UBERON:0000015!1.92e-11!25;UBERON:0002423!1.92e-11!25;UBERON:0006235!1.92e-11!25;UBERON:0004161!1.92e-11!25;UBERON:0005057!5.53e-11!26;UBERON:0009856!5.53e-11!26;UBERON:0003929!6.75e-11!54;UBERON:0000989!1.69e-09!1;UBERON:0008811!1.69e-09!1;UBERON:0006258!1.69e-09!1;UBERON:0005876!1.69e-09!1;UBERON:0004874!1.69e-09!1;UBERON:0002365!3.96e-09!31;UBERON:0002330!3.96e-09!31;UBERON:0001242!5.30e-09!4;UBERON:0001262!5.30e-09!4;UBERON:0004786!5.30e-09!4;UBERON:0004808!5.30e-09!4;UBERON:0001277!5.30e-09!4;UBERON:0002368!5.02e-08!35;UBERON:0003350!2.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.58e-28;19!UBERON:0006925;2.58e-28;19!UBERON:0002423;1.06e-21;25!UBERON:0002365;5.97e-16;31!UBERON:0002330;5.97e-16;31!UBERON:0002368;6.04e-16;33!UBERON:0000949;1.33e-10;43!UBERON:0002417;6.08e-07;58!UBERON:0000916;6.08e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.49e-28,19;UBERON:0006925,2.49e-28,19;UBERON:0008836,2.49e-28,19;UBERON:0008835,1.43e-24,22;UBERON:0003894,1.43e-24,22;UBERON:0009854,1.55e-23,23;UBERON:0007499,1.03e-21,25;UBERON:0009497,1.03e-21,25;UBERON:0000015,1.03e-21,25;UBERON:0002423,1.03e-21,25;UBERON:0006235,1.03e-21,25;UBERON:0004161,1.03e-21,25;UBERON:0009856,6.62e-21,26;UBERON:0002365,1.20e-17,31;UBERON:0002330,1.20e-17,31;UBERON:0002368,1.05e-15,35;UBERON:0000949,2.36e-12,45;UBERON:0003929,2.17e-10,54;UBERON:0005172,2.17e-10,54;UBERON:0005173,2.17e-10,54;UBERON:0002530,1.49e-09,59;UBERON:0002417,2.10e-09,60;UBERON:0000916,2.10e-09,60;UBERON:0005911,5.19e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54524320382506,3.21421847686549,3.77459845583435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@ABCA1 | |||
}} |
Revision as of 06:46, 14 September 2013
Short description: | p10@ABCA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_ABCA1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -413bp_to_AF165281, AJ012376_5end |
EntrezGene: | ABCA1 |
HGNC: | 29 |
UniProt: | O95477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.49e-28 | 19 |
digestive gland | 2.49e-28 | 19 |
liver bud | 2.49e-28 | 19 |
hepatic diverticulum | 1.43e-24 | 22 |
liver primordium | 1.43e-24 | 22 |
digestive tract diverticulum | 1.55e-23 | 23 |
epithelial sac | 1.03e-21 | 25 |
epithelium of foregut-midgut junction | 1.03e-21 | 25 |
anatomical boundary | 1.03e-21 | 25 |
hepatobiliary system | 1.03e-21 | 25 |
foregut-midgut junction | 1.03e-21 | 25 |
septum transversum | 1.03e-21 | 25 |
sac | 6.62e-21 | 26 |
exocrine gland | 1.20e-17 | 31 |
exocrine system | 1.20e-17 | 31 |
endocrine gland | 1.05e-15 | 35 |
endocrine system | 2.36e-12 | 45 |
gut epithelium | 2.17e-10 | 54 |
abdomen element | 2.17e-10 | 54 |
abdominal segment element | 2.17e-10 | 54 |
gland | 1.49e-09 | 59 |
abdominal segment of trunk | 2.10e-09 | 60 |
abdomen | 2.10e-09 | 60 |
endo-epithelium | 5.19e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.02e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.