FFCP PHASE1:Hg19::chr9:4792880..4792902,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10171|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17687|TSSclassifier=S|UniProt=Q9Y2P8|association_with_transcript=11bp_to_ENST00000381750_5end|description=CAGE_peak_3_at_RCL1_5end|id=chr9:4792880..4792902,+|ontology_enrichment_celltype=CL:0000945!2.19e-09!24;CL:0000826!2.19e-09!24|ontology_enrichment_celltype_v019=CL:0000945;1.38e-10;24!CL:0000236;4.30e-07;13|ontology_enrichment_celltype_v019_2=CL:0000945,2.99e-12,24;CL:0000826,2.99e-12,24;CL:0000236,2.99e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.69e-19!235;DOID:14566!1.74e-18!239;DOID:2531!1.66e-12!51;DOID:0060083!1.66e-12!51;DOID:0050686!5.56e-12!137;DOID:1240!2.07e-09!39;DOID:8692!5.04e-08!31;DOID:0050687!1.69e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,9.94e-14,235;DOID:14566,7.07e-13,239;DOID:2531,3.91e-09,51;DOID:0060083,3.91e-09,51;DOID:0050686,2.59e-08,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.866364470720326,1.98838425436749,0.672325146451775,0.602694528023977,0,0,1.72369481307503,0.204000691244253,0.626909442956176,1.14494394852423,1.36874425072884,1.12988375635323,1.83392173795083,2.21671591514854,2.99100968991981,0,0,0.464448369948228,0,1.8072355126695,1.47901604066715,1.85921281392724,1.70603078984906,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0.182664153764634,1.75996244461323,0,0.889509253863555,1.70692089026603,2.00197993518006,1.14950487990897,1.98313461835459,1.90810750907073,1.70763890732835,1.17447437874188,2.6759125968766,1.32171328579026,0,2.10707267820062,0.590129310341499,0.786021525498329,0.411202997999018,0.167186495390678,2.28145586643513,0.946895611469467,0,0.222820913770347,0,0,0.812411591295047,0.640456598628376,0.390178042679635,0.164437904603676,0.829050053357545,0.869409257205157,0.741432815810302,1.33770414044857,0,0,0.383220493601921,1.03088233644789,0.253019692019503,0.318565414324097,1.95325036156926,1.90090408889675,0.451725357233318,0.511946444617674,0,0.710331756132051,0,0,0.534880391567015,0.434473211648397,0,0,0.639312809217652,0.722878304769133,0.50133791063589,0.434539556882471,0,0.486634870302636,0.945348171640679,0.886917589850256,1.05401742831751,0.982343066232845,1.09288586487763,2.96627554227544,0.324547393654683,0,0,0.476981248610684,1.14398982156026,0.371457501329565,1.59009925893364,0,0,1.13061588384802,0.838998872419812,0.550236083880135,1.04497483268405,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.267899184852239,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0.872188104285069,0,0.506522046658319,0.397227542439656,1.14734648299525,0,0.560677600142307,0,0.74000264525148,0,0.67355336034844,0.490385709340376,0.454072282934794,0.576175924479999,1.17160715916898,0,0.570471821544449,0.747243402759005,0.822041490506354,1.45685649931318,0.561803226808994,0.204154171254893,1.35117749042945,0.206651562351531,0,0,0,1.43723628363248,0.841680569770331,1.00094815897571,0.277064115484183,1.75591048352335,0,0.45071417671979,0.907457465280168,0.717558542755448,0,0.423863802319124,0.300091096084402,0.103052529238439,0.772921620136887,0.930584281657949,0.337552664482532,0.584622030967192,0,0.552299391853796,0.323292113637624,0.710019185033229,0.705264687593482,0.67824236924195,0.966304265816484,0,0.286804595389004,1.34171076742555,2.38553582978673,0.69716365721711,0.414644220061482,1.26160425437814,2.55484151353081,0,0,0,0.464367928031979,0,2.72105640091641,0.505754070234305,0.723033089650446,1.10293972732394,0.435758888184812,1.42362371466658,0.674156540800822,1.37355025587742,1.15424147083917,0,0,1.6462960453256,0,1.26755034821831,0.982827216677626,0.590789906681404,0.882926198829301,0.122988438543114,0.686271241194102,0.98775256867763,0,1.40740561376283,1.01847289674383,0.977424915930974,1.03993478527958,0,0.579652024875384,0.70445216541493,0,0.925971025153221,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,1.34337784054272,2.03443756959773,1.53353071666084,0,0,0,0.720599767084807,0.50496973370552,0.317489471460845,0,0,0,0.411309970813294,1.20137223137567,0.857479297891735,1.12131084345361,0.87192013766656,0.5867062865676,0.129271715757778,0,0.845302752556,0.26593811658487,0,0.771622122786426,0,0,0.142977993658148,0,0.823240336780769,0,0.710783897485092,1.58390374586686,0,0,0.499864955910285,0,0,0,0.479249710983165,0,1.42636905040718,0.723906533337896,1.2328579353023,0.358121926479791,0.672510863961164,0.197030760201927,0.646882724578552,0.256686072559497,0.508189248444927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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17687 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2P8 | |||
|association_with_transcript=11bp_to_ENST00000381750_5end | |||
|description=CAGE_peak_3_at_RCL1_5end | |||
|id=chr9:4792880..4792902,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.19e-09!24;CL:0000826!2.19e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.38e-10;24!CL:0000236;4.30e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.99e-12,24;CL:0000826,2.99e-12,24;CL:0000236,2.99e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.69e-19!235;DOID:14566!1.74e-18!239;DOID:2531!1.66e-12!51;DOID:0060083!1.66e-12!51;DOID:0050686!5.56e-12!137;DOID:1240!2.07e-09!39;DOID:8692!5.04e-08!31;DOID:0050687!1.69e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.94e-14,235;DOID:14566,7.07e-13,239;DOID:2531,3.91e-09,51;DOID:0060083,3.91e-09,51;DOID:0050686,2.59e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@RCL1 | |||
}} |
Revision as of 09:06, 14 September 2013
Short description: | p3@RCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RCL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000381750_5end |
EntrezGene: | RCL1 |
HGNC: | 17687 |
UniProt: | Q9Y2P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.99e-12 | 24 |
pro-B cell | 2.99e-12 | 24 |
B cell | 2.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.94e-14 | 235 |
disease of cellular proliferation | 7.07e-13 | 239 |
hematologic cancer | 3.91e-09 | 51 |
immune system cancer | 3.91e-09 | 51 |
organ system cancer | 2.59e-08 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.