FFCP PHASE1:Hg19::chr9:4839762..4839779,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10171|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17687|TSSclassifier=S|UniProt=Q5VZU2,Q5VZU1|association_with_transcript=0bp_to_ENST00000441844,ENST00000448872,uc010mhl.1_5end|coexpression_cluster_id=C129|description=CAGE_peak_6_at_RCL1_5end|id=chr9:4839762..4839779,+|ontology_enrichment_celltype=CL:0000181!1.60e-14!12;CL:0000417!1.60e-14!12;CL:0000668!1.60e-14!12;CL:0000414!1.60e-14!12;CL:0000412!1.60e-14!12;CL:0000182!1.60e-14!12|ontology_enrichment_celltype_v019=CL:0000182;3.27e-45;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.40e-45,12;CL:0000223,2.15e-12,58|ontology_enrichment_development_v019=UBERON:0004161;1.54e-34;11!UBERON:0009497;2.93e-29;13!UBERON:0001041;9.64e-13;30!UBERON:0003104;2.58e-12;31!CL:0000223;2.34e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.31e-14!19;UBERON:0006925!1.31e-14!19;UBERON:0008836!1.31e-14!19;UBERON:0009854!1.86e-14!23;UBERON:0009856!1.53e-12!26;UBERON:0005057!1.55e-12!26;UBERON:0008835!2.28e-12!22;UBERON:0003894!2.28e-12!22;UBERON:0007499!1.14e-10!25;UBERON:0009497!1.14e-10!25;UBERON:0000015!1.14e-10!25;UBERON:0002423!1.14e-10!25;UBERON:0006235!1.14e-10!25;UBERON:0004161!1.14e-10!25;UBERON:0002365!3.91e-10!31;UBERON:0002330!3.91e-10!31;UBERON:0003929!1.06e-08!54;UBERON:0002417!1.72e-08!61;UBERON:0000916!1.72e-08!61;UBERON:0002368!4.00e-07!35;UBERON:0005172!5.02e-07!55;UBERON:0005173!5.02e-07!55|ontology_enrichment_uberon_v019=UBERON:0002107;1.21e-50;19!UBERON:0006925;1.21e-50;19!UBERON:0002423;2.12e-38;25!UBERON:0002365;1.03e-29;31!UBERON:0002330;1.03e-29;31!UBERON:0002368;3.25e-26;33!UBERON:0000949;5.56e-23;43!UBERON:0005172;1.73e-11;52!UBERON:0005173;1.73e-11;52!UBERON:0002417;4.22e-10;58!UBERON:0000916;4.22e-10;58!UBERON:0002530;5.68e-10;57!UBERON:0001007;3.31e-09;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.29e-50,19;UBERON:0006925,1.29e-50,19;UBERON:0008836,1.29e-50,19;UBERON:0008835,1.15e-43,22;UBERON:0003894,1.15e-43,22;UBERON:0009854,9.49e-42,23;UBERON:0007499,2.23e-38,25;UBERON:0009497,2.23e-38,25;UBERON:0000015,2.23e-38,25;UBERON:0002423,2.23e-38,25;UBERON:0006235,2.23e-38,25;UBERON:0004161,2.23e-38,25;UBERON:0009856,6.93e-37,26;UBERON:0002365,7.24e-31,31;UBERON:0002330,7.24e-31,31;UBERON:0002368,2.76e-27,35;UBERON:0000949,1.08e-26,45;UBERON:0003929,4.45e-22,54;UBERON:0005172,1.68e-17,54;UBERON:0005173,1.68e-17,54;UBERON:0002530,5.73e-16,59;UBERON:0002417,1.08e-15,60;UBERON:0000916,1.08e-15,60;UBERON:0005911,2.73e-14,82;UBERON:0005177,1.76e-11,101;UBERON:0001041,1.26e-10,87;UBERON:0004921,1.36e-09,118;UBERON:0009569,4.24e-08,112;UBERON:0003914,1.01e-07,117;UBERON:0001007,1.18e-07,145;UBERON:0001555,1.18e-07,145;UBERON:0007026,1.18e-07,145;UBERON:0000490,1.54e-07,148;UBERON:0005256,2.24e-07,122;UBERON:0004119,7.43e-07,160;UBERON:0000925,7.43e-07,160;UBERON:0006595,7.43e-07,160|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.3775174109154,6.87979051674338,45.4908228144681,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.4106760201683,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.9547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.49688046383725,1.31865373409866,1.55028150864625,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,45.4311924402056,76.8539955690884,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,1.63936315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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10171 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17687 | |||
|TSSclassifier=S | |||
|UniProt=Q5VZU2,Q5VZU1 | |||
|association_with_transcript=0bp_to_ENST00000441844,ENST00000448872,uc010mhl.1_5end | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_6_at_RCL1_5end | |||
|id=chr9:4839762..4839779,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.60e-14!12;CL:0000417!1.60e-14!12;CL:0000668!1.60e-14!12;CL:0000414!1.60e-14!12;CL:0000412!1.60e-14!12;CL:0000182!1.60e-14!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.27e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.40e-45,12;CL:0000223,2.15e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.54e-34;11!UBERON:0009497;2.93e-29;13!UBERON:0001041;9.64e-13;30!UBERON:0003104;2.58e-12;31!CL:0000223;2.34e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.31e-14!19;UBERON:0006925!1.31e-14!19;UBERON:0008836!1.31e-14!19;UBERON:0009854!1.86e-14!23;UBERON:0009856!1.53e-12!26;UBERON:0005057!1.55e-12!26;UBERON:0008835!2.28e-12!22;UBERON:0003894!2.28e-12!22;UBERON:0007499!1.14e-10!25;UBERON:0009497!1.14e-10!25;UBERON:0000015!1.14e-10!25;UBERON:0002423!1.14e-10!25;UBERON:0006235!1.14e-10!25;UBERON:0004161!1.14e-10!25;UBERON:0002365!3.91e-10!31;UBERON:0002330!3.91e-10!31;UBERON:0003929!1.06e-08!54;UBERON:0002417!1.72e-08!61;UBERON:0000916!1.72e-08!61;UBERON:0002368!4.00e-07!35;UBERON:0005172!5.02e-07!55;UBERON:0005173!5.02e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.21e-50;19!UBERON:0006925;1.21e-50;19!UBERON:0002423;2.12e-38;25!UBERON:0002365;1.03e-29;31!UBERON:0002330;1.03e-29;31!UBERON:0002368;3.25e-26;33!UBERON:0000949;5.56e-23;43!UBERON:0005172;1.73e-11;52!UBERON:0005173;1.73e-11;52!UBERON:0002417;4.22e-10;58!UBERON:0000916;4.22e-10;58!UBERON:0002530;5.68e-10;57!UBERON:0001007;3.31e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.29e-50,19;UBERON:0006925,1.29e-50,19;UBERON:0008836,1.29e-50,19;UBERON:0008835,1.15e-43,22;UBERON:0003894,1.15e-43,22;UBERON:0009854,9.49e-42,23;UBERON:0007499,2.23e-38,25;UBERON:0009497,2.23e-38,25;UBERON:0000015,2.23e-38,25;UBERON:0002423,2.23e-38,25;UBERON:0006235,2.23e-38,25;UBERON:0004161,2.23e-38,25;UBERON:0009856,6.93e-37,26;UBERON:0002365,7.24e-31,31;UBERON:0002330,7.24e-31,31;UBERON:0002368,2.76e-27,35;UBERON:0000949,1.08e-26,45;UBERON:0003929,4.45e-22,54;UBERON:0005172,1.68e-17,54;UBERON:0005173,1.68e-17,54;UBERON:0002530,5.73e-16,59;UBERON:0002417,1.08e-15,60;UBERON:0000916,1.08e-15,60;UBERON:0005911,2.73e-14,82;UBERON:0005177,1.76e-11,101;UBERON:0001041,1.26e-10,87;UBERON:0004921,1.36e-09,118;UBERON:0009569,4.24e-08,112;UBERON:0003914,1.01e-07,117;UBERON:0001007,1.18e-07,145;UBERON:0001555,1.18e-07,145;UBERON:0007026,1.18e-07,145;UBERON:0000490,1.54e-07,148;UBERON:0005256,2.24e-07,122;UBERON:0004119,7.43e-07,160;UBERON:0000925,7.43e-07,160;UBERON:0006595,7.43e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.3775174109154,6.87979051674338,45.4908228144681,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.4106760201683,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.9547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.49688046383725,1.31865373409866,1.55028150864625,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,45.4311924402056,76.8539955690884,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,1.63936315354902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.654261577023377,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,25.7899623706921,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p6@RCL1 | |||
}} |
Revision as of 09:06, 14 September 2013
Short description: | p6@RCL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RCL1_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 0bp_to_ENST00000441844, ENST00000448872, uc010mhl.1_5end |
EntrezGene: | RCL1 |
HGNC: | 17687 |
UniProt: | Q5VZU2Q5VZU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.40e-45 | 12 |
endodermal cell | 2.15e-12 | 58 |
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