FFCP PHASE1:Mm9::chr6:146450561..146450582,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16439|HGNC=|UniProt=Q9Z329|association_with_transcript=38bp_to_ENSMUST00000053273_5end|description=CAGE_peak_3_at_Itpr2_5end|id=chr6:146450561..146450582,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!5.21e-09!193;UBERON:0004120!5.21e-09!193;UBERON:0006603!5.21e-09!193;UBERON:0000077!8.29e-09!97;UBERON:0003104!1.46e-08!131;UBERON:0009142!1.46e-08!131;UBERON:0001041!1.49e-08!92;UBERON:0005057!6.02e-08!51;UBERON:0001048!4.14e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0003408,3.44e-07,24;UBERON:0003081,4.60e-07,87;UBERON:0006562,4.70e-07,24;UBERON:0001557,4.70e-07,24;UBERON:0001042,4.70e-07,24;UBERON:0008814,4.70e-07,24;UBERON:0009145,4.70e-07,24|phase1_expression=1.12104192973356,0.348975407639361,0,0.60492842261366,0.500895729946347,0.671517087647559,0.700837921786577,5.93967287831251,1.68946466582,1.40438715793196,0,0.8774937489487,5.9920255475922,7.08105259593879,2.6648780945253,2.02475267389826,0,5.99378114180652,7.67840828192137,5.94145512517242,0.850432901510698,2.97872853602656,0.783599367416806,0.639969691173627,1.60586496747019,1.14846392823004,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,1.1554064790051,0.166234645358492,0,4.18531630736908,0.7813353445238,3.66466620781659,7.05877785637217,2.73218193983378,3.88408282424923,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,6.54352163625172,2.90144856804538,4.7053131879945,1.80081605225163,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,1.14260393761521,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,1.12552522006336,0.763991238884051,0,0.569486723196412,0.186399445825301,0,0.0755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,3.2382191498269,4.54843492213368,2.24013443548668,2.24711072210803,0.340860645156116,0.259786004602869,0,0.985903938436763,2.56652954828636,2.54805239706646,0,1.5154372870785,0.760079596425296,0.505524445014783,1.94112595522402,5.69663344023778,0.593768556259299,0.520455980298408,0.913396434936424,0,0.60289056221049,1.41106448562846,1.50799909595611,4.6967043869531,14.749134405831,2.65383165584962,0.970601099684455,2.42925670306433,0.969750506270444,0,0,0,1.02182822083437,0.718890747035522,0.599902730993408,0.508280908292259,0.449371918214468,0,0,0.521472960576829,0.255715457330331,0.41557608911912,0.162241263067758,0.407357455401265,2.36373244159177,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,1.09597866213787,0.278047249225598,1.74126083261083,0.61734640922383,0.199034266818493,0,0,0.568326998791185,1.44988040774851,0.938104239924385,1.2604344302271,1.18372367792605,1.57411385397923,1.3884040159864,2.09280550275367,2.68273401399619,2.21854150497622,1.48103864922132,3.11918181750281,2.59420190546738,2.48539978623065,3.29325172936576,2.54992195644706,0.210289948564127,0.205809224758569,1.98251269790279,1.05780226665418,0,0,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,2.84717436926707,0.494096864172033,0.754005626400808,0.198956472041151,0.58489226135736,0,0.648414149624083,1.1948476395262,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,1.26244475802573,1.64414996523069,3.69025369949005,1.8839847340965,2.34454611451421,3.85388415213294,0.166845105716094,0,0.224862112384854,0.202860121388503,0.72353147925725,1.78238096246994,3.74004978686054,0.648540907100142,2.19649130550465,5.75072826109418,0.744281895337007,2.18426371180192,4.54641980304801,2.15276896226295,2.8946611281802,1.10851914099963,0.37898282354097,0.325929952884052,0,0,1.50755631697634,0.476087281772027,1.36593553500459,0.945810864637146,0.8858587585951,1.91345722388985,2.29408640602033,2.93564469172023,2.4590339958857,0,1.08781136763742,4.91764273019036,2.48343071674259,0.642202359951168,0.35163505977661,0.163934945376675,2.52470927204373,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0.890328018336276,0.488660878060728,1.31976098378028,3.98235415019888,0.728341908464944,0.604647113929502,1.13163047853539,0.590603785761546,2.15204603560749,0.775284879504663,1.09060118843252,1.78248689192361,2.52829406348653,2.10837217149998,4.12542172992747,1.36175842301515,0.18006109403131,0.129358683782755,0,0.532020700926821,0.356737635204141,0.493647061806363,0,1.17335854031855,1.69465656691056,1.10264199027481,1.6488625294148,0.968786560175433,0.904693873922338,0.835606408021955,0.656563598980245,0.874442509889552,0.370850604021019,1.53783792718067,0.82554747185289,1.11116716421827,0.753473828018764,1.50363650493128,1.60144721244566,1.35982743995084,1.11961161858926,0.967399816630967,0,0,0.203319467126849,0.324016022465404,0.20908829601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| ||
|EntrezGene=16439 | |||
|HGNC= | |||
|UniProt=Q9Z329 | |||
|association_with_transcript=38bp_to_ENSMUST00000053273_5end | |||
|description=CAGE_peak_3_at_Itpr2_5end | |||
|id=chr6:146450561..146450582,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!5.21e-09!193;UBERON:0004120!5.21e-09!193;UBERON:0006603!5.21e-09!193;UBERON:0000077!8.29e-09!97;UBERON:0003104!1.46e-08!131;UBERON:0009142!1.46e-08!131;UBERON:0001041!1.49e-08!92;UBERON:0005057!6.02e-08!51;UBERON:0001048!4.14e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,3.44e-07,24;UBERON:0003081,4.60e-07,87;UBERON:0006562,4.70e-07,24;UBERON:0001557,4.70e-07,24;UBERON:0001042,4.70e-07,24;UBERON:0008814,4.70e-07,24;UBERON:0009145,4.70e-07,24 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0.60492842261366,0.500895729946347,0.671517087647559,0.700837921786577,5.93967287831251,1.68946466582,1.40438715793196,0,0.8774937489487,5.9920255475922,7.08105259593879,2.6648780945253,2.02475267389826,0,5.99378114180652,7.67840828192137,5.94145512517242,0.850432901510698,2.97872853602656,0.783599367416806,0.639969691173627,1.60586496747019,1.14846392823004,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,1.1554064790051,0.166234645358492,0,4.18531630736908,0.7813353445238,3.66466620781659,7.05877785637217,2.73218193983378,3.88408282424923,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.139986421625363,0,6.54352163625172,2.90144856804538,4.7053131879945,1.80081605225163,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,1.14260393761521,0.220868540951614,0,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,1.12552522006336,0.763991238884051,0,0.569486723196412,0.186399445825301,0,0.0755715601067855,0.579728977403356,0.860423876981386,0.679971333707751,3.2382191498269,4.54843492213368,2.24013443548668,2.24711072210803,0.340860645156116,0.259786004602869,0,0.985903938436763,2.56652954828636,2.54805239706646,0,1.5154372870785,0.760079596425296,0.505524445014783,1.94112595522402,5.69663344023778,0.593768556259299,0.520455980298408,0.913396434936424,0,0.60289056221049,1.41106448562846,1.50799909595611,4.6967043869531,14.749134405831,2.65383165584962,0.970601099684455,2.42925670306433,0.969750506270444,0,0,0,1.02182822083437,0.718890747035522,0.599902730993408,0.508280908292259,0.449371918214468,0,0,0.521472960576829,0.255715457330331,0.41557608911912,0.162241263067758,0.407357455401265,2.36373244159177,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.204109497453984,0.2562274405697,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,1.09597866213787,0.278047249225598,1.74126083261083,0.61734640922383,0.199034266818493,0,0,0.568326998791185,1.44988040774851,0.938104239924385,1.2604344302271,1.18372367792605,1.57411385397923,1.3884040159864,2.09280550275367,2.68273401399619,2.21854150497622,1.48103864922132,3.11918181750281,2.59420190546738,2.48539978623065,3.29325172936576,2.54992195644706,0.210289948564127,0.205809224758569,1.98251269790279,1.05780226665418,0,0,0.515469845288373,0.80673409849337,0.22237804384487,0.380451252225118,2.84717436926707,0.494096864172033,0.754005626400808,0.198956472041151,0.58489226135736,0,0.648414149624083,1.1948476395262,0.189667900953082,0.228497025219458,0,0.407302655690628,0.193952487167626,1.26244475802573,1.64414996523069,3.69025369949005,1.8839847340965,2.34454611451421,3.85388415213294,0.166845105716094,0,0.224862112384854,0.202860121388503,0.72353147925725,1.78238096246994,3.74004978686054,0.648540907100142,2.19649130550465,5.75072826109418,0.744281895337007,2.18426371180192,4.54641980304801,2.15276896226295,2.8946611281802,1.10851914099963,0.37898282354097,0.325929952884052,0,0,1.50755631697634,0.476087281772027,1.36593553500459,0.945810864637146,0.8858587585951,1.91345722388985,2.29408640602033,2.93564469172023,2.4590339958857,0,1.08781136763742,4.91764273019036,2.48343071674259,0.642202359951168,0.35163505977661,0.163934945376675,2.52470927204373,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0.567760340833074,0.890328018336276,0.488660878060728,1.31976098378028,3.98235415019888,0.728341908464944,0.604647113929502,1.13163047853539,0.590603785761546,2.15204603560749,0.775284879504663,1.09060118843252,1.78248689192361,2.52829406348653,2.10837217149998,4.12542172992747,1.36175842301515,0.18006109403131,0.129358683782755,0,0.532020700926821,0.356737635204141,0.493647061806363,0,1.17335854031855,1.69465656691056,1.10264199027481,1.6488625294148,0.968786560175433,0.904693873922338,0.835606408021955,0.656563598980245,0.874442509889552,0.370850604021019,1.53783792718067,0.82554747185289,1.11116716421827,0.753473828018764,1.50363650493128,1.60144721244566,1.35982743995084,1.11961161858926,0.967399816630967,0,0,0.203319467126849,0.324016022465404,0.209088296014469,1.31017538247707,0.404593039154462,1.1571483801547,2.09404753587224,0.777689839750757,6.83473244395618,0,0,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0,0.104859344425711,0.241584120826006,0.864090018773596,4.4241556887945,0.202725215290164,0.718976700153791,0.909445760844565,2.68540043501222,2.18549490259391,4.20684073319891,2.80610101631697,4.54349024766664,4.19137436602499,3.7305688500631,4.77543615624787,6.15755786498109,7.12949103307571,3.40095575422817,0,0,0,0.19318959403219,0.750729901804728,2.19781949120718,1.71494703263253,2.00628841614145,0,0.920650473014354,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,1.55572709461131,1.44224540067226,1.92551525755089,1.26348605881899,2.02783439912192,1.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| |||
|short_description=p3@Itpr2 | |||
}} | |||
Revision as of 09:23, 14 September 2013
| Short description: | p3@Itpr2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Itpr2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 38bp_to_ENSMUST00000053273_5end |
| EntrezGene: | Itpr2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gland of gut | 3.44e-07 | 24 |
| lateral plate mesoderm | 4.60e-07 | 87 |
| pharynx | 4.70e-07 | 24 |
| upper respiratory tract | 4.70e-07 | 24 |
| chordate pharynx | 4.70e-07 | 24 |
| pharyngeal arch system | 4.70e-07 | 24 |
| pharyngeal region of foregut | 4.70e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
