FFCP PHASE1:Mm9::chr6:20963159..20963195,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=218|UniProt=|association_with_transcript=46bp_to_ENSMUST00000157206_5end|description=CAGE_peak_1_at_ENSMUST00000157206_5end|id=chr6:20963159..20963195,-|ontology_enrichment_celltype=CL:0002614!3.51e-09!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!1.74e-26!6;UBERON:0002950!7.90e-15!4;UBERON:0001891!7.90e-15!4;UBERON:0009616!7.90e-15!4;UBERON:0000955!3.38e-14!50;UBERON:0006238!3.38e-14!50;UBERON:0001896!7.05e-14!2;UBERON:0005290!7.05e-14!2;UBERON:0010096!7.05e-14!2;UBERON:0002616!7.24e-12!49;UBERON:0001017!2.59e-11!73;UBERON:0005743!2.59e-11!73;UBERON:0001049!3.09e-11!52;UBERON:0005068!3.09e-11!52;UBERON:0006241!3.09e-11!52;UBERON:0007135!3.09e-11!52;UBERON:0000033!5.18e-11!63;UBERON:0000073!5.64e-11!75;UBERON:0001016!5.64e-11!75;UBERON:0004733!2.88e-10!6;UBERON:0004732!2.88e-10!6;UBERON:0002028!2.88e-10!6;UBERON:0007277!2.88e-10!6;UBERON:0002038!3.51e-09!3;UBERON:0002308!3.51e-09!3;UBERON:0009663!3.51e-09!3;UBERON:0009661!3.51e-09!3;UBERON:0006331!3.51e-09!3;UBERON:0000125!3.51e-09!3;UBERON:0003076!5.93e-09!12;UBERON:0003057!5.93e-09!12;UBERON:0002259!6.29e-08!1;UBERON:0002314!6.29e-08!1;UBERON:0006777!6.29e-08!1;UBERON:0005882!6.29e-08!1;UBERON:0002346!6.46e-08!71;UBERON:0003075!6.46e-08!71;UBERON:0007284!6.46e-08!71;UBERON:0007811!1.03e-07!86;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0000153!6.10e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002259,8.39e-23,1;UBERON:0002314,8.39e-23,1;UBERON:0004061,8.39e-23,1;UBERON:0006777,8.39e-23,1;UBERON:0005882,8.39e-23,1;UBERON:0001896,3.12e-12,2;UBERON:0002298,3.12e-12,2;UBERON:0005290,3.12e-12,2;UBERON:0010096,3.12e-12,2;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0007023,1.20e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,1.3481157546434,0,0,0,0,0.83115217823824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000157206}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENSMUST00000157206_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000157206_5end | |||
|id=chr6:20963159..20963195,- | |||
|ontology_enrichment_celltype=CL:0002614!3.51e-09!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.74e-26!6;UBERON:0002950!7.90e-15!4;UBERON:0001891!7.90e-15!4;UBERON:0009616!7.90e-15!4;UBERON:0000955!3.38e-14!50;UBERON:0006238!3.38e-14!50;UBERON:0001896!7.05e-14!2;UBERON:0005290!7.05e-14!2;UBERON:0010096!7.05e-14!2;UBERON:0002616!7.24e-12!49;UBERON:0001017!2.59e-11!73;UBERON:0005743!2.59e-11!73;UBERON:0001049!3.09e-11!52;UBERON:0005068!3.09e-11!52;UBERON:0006241!3.09e-11!52;UBERON:0007135!3.09e-11!52;UBERON:0000033!5.18e-11!63;UBERON:0000073!5.64e-11!75;UBERON:0001016!5.64e-11!75;UBERON:0004733!2.88e-10!6;UBERON:0004732!2.88e-10!6;UBERON:0002028!2.88e-10!6;UBERON:0007277!2.88e-10!6;UBERON:0002038!3.51e-09!3;UBERON:0002308!3.51e-09!3;UBERON:0009663!3.51e-09!3;UBERON:0009661!3.51e-09!3;UBERON:0006331!3.51e-09!3;UBERON:0000125!3.51e-09!3;UBERON:0003076!5.93e-09!12;UBERON:0003057!5.93e-09!12;UBERON:0002259!6.29e-08!1;UBERON:0002314!6.29e-08!1;UBERON:0006777!6.29e-08!1;UBERON:0005882!6.29e-08!1;UBERON:0002346!6.46e-08!71;UBERON:0003075!6.46e-08!71;UBERON:0007284!6.46e-08!71;UBERON:0007811!1.03e-07!86;UBERON:0004121!1.09e-07!102;UBERON:0000924!1.09e-07!102;UBERON:0006601!1.09e-07!102;UBERON:0000153!6.10e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002259,8.39e-23,1;UBERON:0002314,8.39e-23,1;UBERON:0004061,8.39e-23,1;UBERON:0006777,8.39e-23,1;UBERON:0005882,8.39e-23,1;UBERON:0001896,3.12e-12,2;UBERON:0002298,3.12e-12,2;UBERON:0005290,3.12e-12,2;UBERON:0010096,3.12e-12,2;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0007023,1.20e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0,0,0,0,0,1.3481157546434,0,0,0,0,0.83115217823824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000157206 | |||
}} |
Revision as of 09:28, 14 September 2013
Short description: | p1@ENSMUST00000157206 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000157206_5end |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | 46bp_to_ENSMUST00000157206_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpora quadrigemina | 8.39e-23 | 1 |
midbrain tectum | 8.39e-23 | 1 |
neural tube mantle layer | 8.39e-23 | 1 |
tectal plate | 8.39e-23 | 1 |
neural tube alar plate | 8.39e-23 | 1 |
medulla oblongata | 3.12e-12 | 2 |
brainstem | 3.12e-12 | 2 |
myelencephalon | 3.12e-12 | 2 |
future myelencephalon | 3.12e-12 | 2 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
adult organism | 1.20e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.