FFCP PHASE1:Mm9::chr7:103741871..103741887,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1127|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:103741871..103741887,+|id=chr7:103741871..103741887,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.04e-07!333;UBERON:0003056!3.87e-07!49;UBERON:0002021!5.87e-07!10;UBERON:0000411!5.87e-07!10;UBERON:0001950!5.87e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.21e-11,49;UBERON:0010371,2.95e-09,73;UBERON:0002346,6.77e-09,64;UBERON:0003075,6.77e-09,64;UBERON:0007284,6.77e-09,64;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0000955,1.81e-08,47;UBERON:0006238,1.81e-08,47;UBERON:0003080,4.26e-08,40;UBERON:0002616,9.92e-08,46;UBERON:0002780,2.19e-07,39;UBERON:0001890,2.19e-07,39;UBERON:0006240,2.19e-07,39;UBERON:0001049,8.20e-07,52;UBERON:0005068,8.20e-07,52;UBERON:0006241,8.20e-07,52;UBERON:0007135,8.20e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.517875767294343,0.742210695324124,0.173485326766136,0,0,0.301445281105245,1.76383060703557,0.125666591329675,0.988779870937496,0.144599356919912,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,0.878342391034642,0.41889341362691,0,0,0,0.127070227073065,4.34392854273986,5.03250663100489,2.1361239859187,4.17178368461463,4.60287823194595,1.87009240103604,5.19172041816825,1.93494791315601,0.124406970610093,0,0.420883711772948,2.86264974517948,0.229902104433473,0.360124259610698,4.21973489940002,5.44291993210623,4.48398020996974,2.43624483855295,5.95017752699736,1.29340795759705,3.59301552318857,1.40760899331159,0,2.78047249225598,0.696504333044333,1.23469281844766,1.19420560091096,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0.393528463494808,0.308534225774757,0.697601834251224,0.536546802799238,0.233530684734339,0.493679549740441,0,0.0810688095458557,0,0.219550115291051,0,2.73376933133365,3.39585220851639,0,0,2.13288250535234,2.78684006232526,0.644337306610467,0.80673409849337,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0,0,0,2.62771579002376,0,2.24016460629846,1.74557238450863,3.36651935473529,1.01178459398812,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.651859905768103,1.52770577197669,0.938760993154008,0.837531287209079,0.476087281772027,0.780534591431195,2.52216230569906,1.99318220683897,3.02964060449226,0,0.345369963731791,0.433947175744535,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0.99358059645788,1.24645922567079,1.95464351224291,2.14461159864296,0,1.21390318077491,0.302323556964751,0.565815239267694,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,3.74483566329167,1.62054984628179,0.258717367565509,0.428674070063185,1.06404140185364,1.78368817602071,1.15184314421485,0,0,0.21183207086382,0,1.6488625294148,0.807322133479528,1.62844897306021,1.19372344003136,1.64140899745061,0.291480836629851,2.22510362412612,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,0.972048067396211,1.67270636811575,1.09181281873089,1.34864346384821,0.826534557253359,0,0.129614973291793,0,0,0.747582730219894,0.827292452285488,0.388902376688095,1.42075805825504,3.37912250981556,4.5769323071844,2.47388331203505,0.629156066554265,0.483168241652012,0,0,1.01362607645082,1.1298205288131,0.389762468933385,0.895133478337407,1.39076948346885,0.721172697119813,0.590758108698309,0.504832249740738,0.533447646584999,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0,0,2.38097111547445,4.93047271881851,0,5.64751842617067,3.22227665555024,1.14579102687879,3.95262319390481,0.685082519770642,3.0215755895588,3.37511250115903,4.5032120322422,3.17199686288943,3.62432218226274,0.415149390336707,1.99512436700516,1.70733605754134,1.21553358534147,0,0,1.33348036680969,1.85431551515005,1.28367683836726,1.01078884705519,0,0.377252682772152,1.96647165686753,1.60062881012173,1.20614484806788,1.90517476513229,1.15884325944855,1.15745532278223,0.824171801606613,1.47198920134397,0,1.95223386775271,1.66905332963125,0.726732083161643,0.846984423737976,1.26921911837515,1.46342378298218,0.526139422875686,0.950628796921032,2.80571135828869,1.30498519936592,1.97008964751127,0.409231043169689,0.77468420592983,0,0.749431733813838,0.233931608445408,0.644613162144895,0.191288332068843,0,0|short_description=p@chr7:103741871..103741887,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1127 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:103741871..103741887,+ | |||
|id=chr7:103741871..103741887,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.04e-07!333;UBERON:0003056!3.87e-07!49;UBERON:0002021!5.87e-07!10;UBERON:0000411!5.87e-07!10;UBERON:0001950!5.87e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.21e-11,49;UBERON:0010371,2.95e-09,73;UBERON:0002346,6.77e-09,64;UBERON:0003075,6.77e-09,64;UBERON:0007284,6.77e-09,64;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0000955,1.81e-08,47;UBERON:0006238,1.81e-08,47;UBERON:0003080,4.26e-08,40;UBERON:0002616,9.92e-08,46;UBERON:0002780,2.19e-07,39;UBERON:0001890,2.19e-07,39;UBERON:0006240,2.19e-07,39;UBERON:0001049,8.20e-07,52;UBERON:0005068,8.20e-07,52;UBERON:0006241,8.20e-07,52;UBERON:0007135,8.20e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0.517875767294343,0.742210695324124,0.173485326766136,0,0,0.301445281105245,1.76383060703557,0.125666591329675,0.988779870937496,0.144599356919912,0.884610551949874,0.647067399789637,0.441683036920787,0.484875253135222,0,0.878342391034642,0.41889341362691,0,0,0,0.127070227073065,4.34392854273986,5.03250663100489,2.1361239859187,4.17178368461463,4.60287823194595,1.87009240103604,5.19172041816825,1.93494791315601,0.124406970610093,0,0.420883711772948,2.86264974517948,0.229902104433473,0.360124259610698,4.21973489940002,5.44291993210623,4.48398020996974,2.43624483855295,5.95017752699736,1.29340795759705,3.59301552318857,1.40760899331159,0,2.78047249225598,0.696504333044333,1.23469281844766,1.19420560091096,0,0,0,0.414251545071004,0.234526059981096,0,0.473489471170421,0.393528463494808,0.308534225774757,0.697601834251224,0.536546802799238,0.233530684734339,0.493679549740441,0,0.0810688095458557,0,0.219550115291051,0,2.73376933133365,3.39585220851639,0,0,2.13288250535234,2.78684006232526,0.644337306610467,0.80673409849337,0.22237804384487,0.570676878337677,0,0.164698954724011,0,0.397912944082302,0.38992817423824,0,0,0,0,2.62771579002376,0,2.24016460629846,1.74557238450863,3.36651935473529,1.01178459398812,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.651859905768103,1.52770577197669,0.938760993154008,0.837531287209079,0.476087281772027,0.780534591431195,2.52216230569906,1.99318220683897,3.02964060449226,0,0.345369963731791,0.433947175744535,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0.99358059645788,1.24645922567079,1.95464351224291,2.14461159864296,0,1.21390318077491,0.302323556964751,0.565815239267694,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,1.06949213515416,0.316036757935816,0,0,3.74483566329167,1.62054984628179,0.258717367565509,0.428674070063185,1.06404140185364,1.78368817602071,1.15184314421485,0,0,0.21183207086382,0,1.6488625294148,0.807322133479528,1.62844897306021,1.19372344003136,1.64140899745061,0.291480836629851,2.22510362412612,0.170870880797853,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0,0,0.954670618015114,0.474503990371703,1.42323626988794,0.972048067396211,1.67270636811575,1.09181281873089,1.34864346384821,0.826534557253359,0,0.129614973291793,0,0,0.747582730219894,0.827292452285488,0.388902376688095,1.42075805825504,3.37912250981556,4.5769323071844,2.47388331203505,0.629156066554265,0.483168241652012,0,0,1.01362607645082,1.1298205288131,0.389762468933385,0.895133478337407,1.39076948346885,0.721172697119813,0.590758108698309,0.504832249740738,0.533447646584999,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0,0,2.38097111547445,4.93047271881851,0,5.64751842617067,3.22227665555024,1.14579102687879,3.95262319390481,0.685082519770642,3.0215755895588,3.37511250115903,4.5032120322422,3.17199686288943,3.62432218226274,0.415149390336707,1.99512436700516,1.70733605754134,1.21553358534147,0,0,1.33348036680969,1.85431551515005,1.28367683836726,1.01078884705519,0,0.377252682772152,1.96647165686753,1.60062881012173,1.20614484806788,1.90517476513229,1.15884325944855,1.15745532278223,0.824171801606613,1.47198920134397,0,1.95223386775271,1.66905332963125,0.726732083161643,0.846984423737976,1.26921911837515,1.46342378298218,0.526139422875686,0.950628796921032,2.80571135828869,1.30498519936592,1.97008964751127,0.409231043169689,0.77468420592983,0,0.749431733813838,0.233931608445408,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p@chr7:103741871..103741887,+ | |||
}} |
Revision as of 11:08, 14 September 2013
Short description: | p@chr7:103741871..103741887, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:103741871..103741887, + |
Coexpression cluster: | MCL_coexpression_mm9:1127 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.21e-11 | 49 |
ecto-epithelium | 2.95e-09 | 73 |
neurectoderm | 6.77e-09 | 64 |
neural plate | 6.77e-09 | 64 |
presumptive neural plate | 6.77e-09 | 64 |
occipital lobe | 1.11e-08 | 10 |
visual cortex | 1.11e-08 | 10 |
neocortex | 1.11e-08 | 10 |
brain | 1.81e-08 | 47 |
future brain | 1.81e-08 | 47 |
anterior neural tube | 4.26e-08 | 40 |
regional part of brain | 9.92e-08 | 46 |
regional part of forebrain | 2.19e-07 | 39 |
forebrain | 2.19e-07 | 39 |
future forebrain | 2.19e-07 | 39 |
neural tube | 8.20e-07 | 52 |
neural rod | 8.20e-07 | 52 |
future spinal cord | 8.20e-07 | 52 |
neural keel | 8.20e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.