FFCP PHASE1:Hg19::chrX:48325956..48325972,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92745|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18070|TSSclassifier=S|UniProt=Q8WUX1|association_with_transcript=-76bp_to_ENST00000376875,uc004djk.3_5end|coexpression_cluster_id=C14|description=CAGE_peak_9_at_SLC38A5_5end|id=chrX:48325956..48325972,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;6.87e-11;2!CL:0000558;6.87e-11;2!CL:0000349;3.62e-08;19!CL:0002577;3.60e-07;3!CL:0002541;4.27e-07;3|ontology_enrichment_celltype_v019_2=CL:0000764,7.23e-11,2;CL:0000765,7.23e-11,2;CL:0000050,7.23e-11,2;CL:0000038,7.23e-11,2;CL:0000558,7.23e-11,2;CL:0000547,7.23e-11,2;CL:0000549,7.23e-11,2;CL:0000550,7.23e-11,2;CL:0000552,7.23e-11,2;CL:0000349,3.28e-08,19;CL:0002577,2.89e-07,3;CL:0002541,3.60e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!3.81e-08!14;UBERON:0000158!3.81e-08!14;UBERON:0003124!7.80e-08!7|ontology_enrichment_uberon_v019=UBERON:0000178;7.34e-26;15!UBERON:0000179;7.34e-26;15!UBERON:0000463;7.34e-26;15!UBERON:0002390;8.08e-13;32!UBERON:0005631;1.81e-07;10!UBERON:0000158;1.81e-07;10!UBERON:0003124;4.27e-07;3!UBERON:0000920;4.27e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.37e-26,15;UBERON:0000179,7.37e-26,15;UBERON:0000463,7.37e-26,15;UBERON:0005631,2.36e-11,14;UBERON:0000158,2.36e-11,14;UBERON:0003124,5.68e-11,7;UBERON:0000920,3.60e-07,3|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0.312160076830321,0,0.597794722207204,0,0,0,0.408308342509787,0,0.309977343527296,0,0,0.910161361938026,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0,0.389748020644795,0.252433774244115,0.276149695926898,0.161646056818812,0,0,0,0.966304265816484,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.53650399572076,1.1240175325762,0,0,0.325808305310325,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0.503946384596579,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.22001485746285,0.258543431515556,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0.909382714338778,3.32870879020994,1.81434175997808,0,0.460385919864187,0,0.128139149255701,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.492762936082855,2.07701771673448,0.232420756919918,0,0,0.184161977871793,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60445740956463,4.70583811844821,0,0.328014645699706,0,0.515205058238611,0,0,1.72279661398852,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0.330569830721956,1.15314040419064,0.255225424989168,0.10115778085555,2.78907329578371,1.88887408098384,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0,2.11300293513511,0,0,0,1.10273068709225,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0.709522128141196,0,0,0,0,0.384888450902048,0.670302275535787,0,0.376575203107117,0.86101074534246,0,0.886860307073351,0.229723400206959,206.023729348261,166.690911157038,127.600969927012,85.5252073893462,77.7474696132907,172.493900777263,175.510217102387,130.865654088555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,1.53580351049616,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,45.5017875459186,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,2.23300811812344,0.0915975934018623,1.5991043280559,0,0,0.166211681900156,1.35357396370308,1.76456280885966,0.839107934879214,1.13852239634511,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0.489961987071888,0,0,0,0,0,0,0.193978032976839,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,1.34173875039706,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92745 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18070 | |||
|TSSclassifier=S | |||
|UniProt=Q8WUX1 | |||
|association_with_transcript=-76bp_to_ENST00000376875,uc004djk.3_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_9_at_SLC38A5_5end | |||
|id=chrX:48325956..48325972,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;6.87e-11;2!CL:0000558;6.87e-11;2!CL:0000349;3.62e-08;19!CL:0002577;3.60e-07;3!CL:0002541;4.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.23e-11,2;CL:0000765,7.23e-11,2;CL:0000050,7.23e-11,2;CL:0000038,7.23e-11,2;CL:0000558,7.23e-11,2;CL:0000547,7.23e-11,2;CL:0000549,7.23e-11,2;CL:0000550,7.23e-11,2;CL:0000552,7.23e-11,2;CL:0000349,3.28e-08,19;CL:0002577,2.89e-07,3;CL:0002541,3.60e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!3.81e-08!14;UBERON:0000158!3.81e-08!14;UBERON:0003124!7.80e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.34e-26;15!UBERON:0000179;7.34e-26;15!UBERON:0000463;7.34e-26;15!UBERON:0002390;8.08e-13;32!UBERON:0005631;1.81e-07;10!UBERON:0000158;1.81e-07;10!UBERON:0003124;4.27e-07;3!UBERON:0000920;4.27e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.37e-26,15;UBERON:0000179,7.37e-26,15;UBERON:0000463,7.37e-26,15;UBERON:0005631,2.36e-11,14;UBERON:0000158,2.36e-11,14;UBERON:0003124,5.68e-11,7;UBERON:0000920,3.60e-07,3 | |||
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| |||
|short_description=p9@SLC38A5 | |||
}} |
Revision as of 12:04, 14 September 2013
Short description: | p9@SLC38A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SLC38A5_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -76bp_to_ENST00000376875, uc004djk.3_5end |
EntrezGene: | SLC38A5 |
HGNC: | 18070 |
UniProt: | Q8WUX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.23e-11 | 2 |
erythroblast | 7.23e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 7.23e-11 | 2 |
erythroid progenitor cell | 7.23e-11 | 2 |
reticulocyte | 7.23e-11 | 2 |
proerythroblast | 7.23e-11 | 2 |
basophilic erythroblast | 7.23e-11 | 2 |
polychromatophilic erythroblast | 7.23e-11 | 2 |
orthochromatic erythroblast | 7.23e-11 | 2 |
extraembryonic cell | 3.28e-08 | 19 |
placental epithelial cell | 2.89e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 7.37e-26 | 15 |
haemolymphatic fluid | 7.37e-26 | 15 |
organism substance | 7.37e-26 | 15 |
extraembryonic membrane | 2.36e-11 | 14 |
membranous layer | 2.36e-11 | 14 |
chorion | 5.68e-11 | 7 |
egg chorion | 3.60e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.