FFCP PHASE1:Mm9::chr7:141416771..141416787,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=11489|HGNC=|MCL_coexpression_id=1839|UniProt=F8VQN4,Q61824|association_with_transcript=0bp_to_ENSMUST00000067680,NM_007400,uc009kdp.1_5end|description=CAGE_peak_2_at_Adam12_5end|id=chr7:141416771..141416787,-|ontology_enrichment_celltype=CL:0000107!3.92e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.94e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.69e-07!333;UBERON:0002410!3.92e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.94e-07,9;UBERON:0000010,6.56e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.62203089951223,3.67093504323363,55.5497854487108,14.8257106338704,7.0299578475031,8.74934545834275,26.3174472655682,2.87505128729943,0,0,0,47.3357362306142,16.3324060765091,4.64104883049698,0.202316460859598,0,0,34.2232977389823,33.7932022522233,0,0,0.7104801149461,2.09720077362883,1.15265491596466,0.207379224616955,0.135005938331691,0.210324961351382,1.14260393761521,1.98781686856452,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0.659431438650969,0.182975287204819,0.52091337055676,0.558365998002762,1.12552522006336,1.06958773443767,1.76777151284201,1.56608848879013,0.559198337475902,1.81742863999642,3.92972112555285,0.289864488701678,0.860423876981386,1.3599426674155,0,0,0,1.54488862144927,2.21559419351475,1.55871602761721,1.41335829804136,0.281686839553361,15.3991772897181,22.9324715735981,7.11066703153331,6.71122227134764,4.56047757855178,5.56076889516262,0.91347103775248,10.0985774622397,1.03909497345377,5.37804512975021,3.34912026143355,2.30615497256059,2.41156224884196,3.76283862834255,3.01599819191221,1.97755974187499,17.2073234734695,1.76922110389975,8.7354098971601,6.18356251689102,9.21262980956922,0,0.878342391034642,0.41889341362691,0,0,0,0,1.64769703345305,0.457500602818626,0.125654352112864,0.695297280769106,2.04572365864264,0.41557608911912,0.973447578406546,8.65634592727688,9.08170885453679,0,0.420883711772948,0.910843100738926,0.689706313300419,0.900310649026746,2.10986744970001,4.62648194229029,4.35586648968489,5.15359485078509,1.03481348295606,0.862271971731369,1.70195472151037,1.40760899331159,2.41115305670332,3.05851974148158,5.92028683087683,5.96768195583036,1.59227413454795,0,0,0,2.48550927042602,1.64168241986767,0.900310307305074,3.78791576936336,2.16440654922144,2.1597395804233,1.62773761325285,1.60964040839772,0.467061369468678,1.97471819896177,1.47750717671186,0.56748166682099,0.146199987425332,0.878200461164203,1.07365135008297,1.05144974282064,0.720332286654991,0.330418782983798,0,6.82522401712749,6.50262681209228,4.63922860759536,2.8235693447268,3.33567065767305,1.33157938278791,1.42358718463353,1.64698954724011,2.01068167040216,0.795825888164603,2.33956904542944,0,0.216138049874694,0.597423819763102,1.70701110857774,2.28497025219458,7.88954149711563,1.83286195060783,1.74557238450863,1.75339549725796,8.22074982615345,3.54264355151045,5.65195420228949,3.08492909804501,0.592905254174298,3.33690211432188,3.73462090715086,1.79889689907883,3.44862206360455,1.4470629585145,2.29163266603278,4.31544206176216,0.810676133875177,1.64736847912849,1.43768206527355,2.97712758134803,2.18426371180192,1.76805214562978,0.538192240565737,0,0.369506380333209,9.66406200029472,15.3187077855504,15.1073126339917,15.2548661387526,13.4005005953453,9.28370199455454,1.36593553500459,10.8768249433272,7.52979944805835,6.37819074629948,1.96635977658886,2.24490476425664,0.289298117163023,0,0,1.96705709207614,3.58717770196152,1.28440471990234,0.586058432961016,7.70494243270374,5.30188947129183,36.5989534522858,33.5777320095109,39.8533285805678,19.3564726341567,17.6010952525091,12.1722908239198,15.7876173653209,16.3663280430335,16.602086673754,2.24924921495265,7.94864477166304,3.02711526234334,4.56083486190013,4.12425307431339,0,2.6705869977048,2.41858845571801,2.64047111658257,5.02013217897314,12.2974059177571,5.94385074286909,8.36127577798263,8.91243445961803,2.84433082142234,2.10837217149998,5.15677716240934,0.340439605753788,1.8006109403131,1.4229455216103,3.00071849044229,5.67488747655275,4.28085162244969,4.44282355625727,3.65357938937519,16.8963629805871,3.81297727554876,0.220528398054962,0.98931751764888,4.84393280087717,8.62474826472629,5.72987251215055,3.93938159388147,0.874442509889552,0.556275906031529,0.683483523191411,6.19160603889667,3.70389054739423,1.88368457004691,0.410082683163076,0.686334519619568,0,0,0,0,4.58687190692646,3.86306987541013,2.05210147561422,1.67270636811575,3.05707589244649,1.48350781023303,1.40510874733071,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,2.99033092087958,1.98550188548517,2.13896307178452,3.22899558694328,4.73077151374179,5.04636126176742,9.37471570876441,4.92838918800841,0.966336483304024,1.15212002503146,0.948033361884535,3.24360344464263,4.10843828659309,1.94881234466693,2.50637373934474,1.58945083825012,1.08175904567972,0.590758108698309,1.61546319917036,0.533447646584999,0.604957110821043,0,0.192423683280659,0.116876902181569,0,0,0,0,0.965947970160952,15.0145980360946,19.7803754208646,3.00115730710692,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,2.79317411380722,3.07320490357441,6.07766792670735,3.5634237646757,3.30918315210025,11.3345831178824,10.5077879191836,14.1204452220399,10.3605856823157,12.673964994512,10.9403278003924,9.08322622457859,8.51534526984761,6.94969174362921,7.62069906052918,10.1978206831473,10.0312794641127,5.76920261124629,11.481515770483,9.60033906679163,9.40621772644489,8.58370283810355,7.1219744149841,10.3520318456864,9.39222147597609,8.23175877927476,10.5227884575137,8.28405094459757,7.2948495315506,10.0839765405548,8.0773675547962,9.00308294973317,7.7468420592983,8.68079749415136,5.9954538705107,8.88940112092552,5.58664740525576,5.7386499620653,7.0589254118245,8.11537424671475|short_description=p2@Adam12}} | ||
|EntrezGene=11489 | |||
|HGNC= | |||
|MCL_coexpression_id=1839 | |||
|UniProt=F8VQN4,Q61824 | |||
|association_with_transcript=0bp_to_ENSMUST00000067680,NM_007400,uc009kdp.1_5end | |||
|description=CAGE_peak_2_at_Adam12_5end | |||
|id=chr7:141416771..141416787,- | |||
|ontology_enrichment_celltype=CL:0000107!3.92e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.94e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.69e-07!333;UBERON:0002410!3.92e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.94e-07,9;UBERON:0000010,6.56e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.62203089951223,3.67093504323363,55.5497854487108,14.8257106338704,7.0299578475031,8.74934545834275,26.3174472655682,2.87505128729943,0,0,0,47.3357362306142,16.3324060765091,4.64104883049698,0.202316460859598,0,0,34.2232977389823,33.7932022522233,0,0,0.7104801149461,2.09720077362883,1.15265491596466,0.207379224616955,0.135005938331691,0.210324961351382,1.14260393761521,1.98781686856452,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0.46081959976873,0.659431438650969,0.182975287204819,0.52091337055676,0.558365998002762,1.12552522006336,1.06958773443767,1.76777151284201,1.56608848879013,0.559198337475902,1.81742863999642,3.92972112555285,0.289864488701678,0.860423876981386,1.3599426674155,0,0,0,1.54488862144927,2.21559419351475,1.55871602761721,1.41335829804136,0.281686839553361,15.3991772897181,22.9324715735981,7.11066703153331,6.71122227134764,4.56047757855178,5.56076889516262,0.91347103775248,10.0985774622397,1.03909497345377,5.37804512975021,3.34912026143355,2.30615497256059,2.41156224884196,3.76283862834255,3.01599819191221,1.97755974187499,17.2073234734695,1.76922110389975,8.7354098971601,6.18356251689102,9.21262980956922,0,0.878342391034642,0.41889341362691,0,0,0,0,1.64769703345305,0.457500602818626,0.125654352112864,0.695297280769106,2.04572365864264,0.41557608911912,0.973447578406546,8.65634592727688,9.08170885453679,0,0.420883711772948,0.910843100738926,0.689706313300419,0.900310649026746,2.10986744970001,4.62648194229029,4.35586648968489,5.15359485078509,1.03481348295606,0.862271971731369,1.70195472151037,1.40760899331159,2.41115305670332,3.05851974148158,5.92028683087683,5.96768195583036,1.59227413454795,0,0,0,2.48550927042602,1.64168241986767,0.900310307305074,3.78791576936336,2.16440654922144,2.1597395804233,1.62773761325285,1.60964040839772,0.467061369468678,1.97471819896177,1.47750717671186,0.56748166682099,0.146199987425332,0.878200461164203,1.07365135008297,1.05144974282064,0.720332286654991,0.330418782983798,0,6.82522401712749,6.50262681209228,4.63922860759536,2.8235693447268,3.33567065767305,1.33157938278791,1.42358718463353,1.64698954724011,2.01068167040216,0.795825888164603,2.33956904542944,0,0.216138049874694,0.597423819763102,1.70701110857774,2.28497025219458,7.88954149711563,1.83286195060783,1.74557238450863,1.75339549725796,8.22074982615345,3.54264355151045,5.65195420228949,3.08492909804501,0.592905254174298,3.33690211432188,3.73462090715086,1.79889689907883,3.44862206360455,1.4470629585145,2.29163266603278,4.31544206176216,0.810676133875177,1.64736847912849,1.43768206527355,2.97712758134803,2.18426371180192,1.76805214562978,0.538192240565737,0,0.369506380333209,9.66406200029472,15.3187077855504,15.1073126339917,15.2548661387526,13.4005005953453,9.28370199455454,1.36593553500459,10.8768249433272,7.52979944805835,6.37819074629948,1.96635977658886,2.24490476425664,0.289298117163023,0,0,1.96705709207614,3.58717770196152,1.28440471990234,0.586058432961016,7.70494243270374,5.30188947129183,36.5989534522858,33.5777320095109,39.8533285805678,19.3564726341567,17.6010952525091,12.1722908239198,15.7876173653209,16.3663280430335,16.602086673754,2.24924921495265,7.94864477166304,3.02711526234334,4.56083486190013,4.12425307431339,0,2.6705869977048,2.41858845571801,2.64047111658257,5.02013217897314,12.2974059177571,5.94385074286909,8.36127577798263,8.91243445961803,2.84433082142234,2.10837217149998,5.15677716240934,0.340439605753788,1.8006109403131,1.4229455216103,3.00071849044229,5.67488747655275,4.28085162244969,4.44282355625727,3.65357938937519,16.8963629805871,3.81297727554876,0.220528398054962,0.98931751764888,4.84393280087717,8.62474826472629,5.72987251215055,3.93938159388147,0.874442509889552,0.556275906031529,0.683483523191411,6.19160603889667,3.70389054739423,1.88368457004691,0.410082683163076,0.686334519619568,0,0,0,0,4.58687190692646,3.86306987541013,2.05210147561422,1.67270636811575,3.05707589244649,1.48350781023303,1.40510874733071,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,2.99033092087958,1.98550188548517,2.13896307178452,3.22899558694328,4.73077151374179,5.04636126176742,9.37471570876441,4.92838918800841,0.966336483304024,1.15212002503146,0.948033361884535,3.24360344464263,4.10843828659309,1.94881234466693,2.50637373934474,1.58945083825012,1.08175904567972,0.590758108698309,1.61546319917036,0.533447646584999,0.604957110821043,0,0.192423683280659,0.116876902181569,0,0,0,0,0.965947970160952,15.0145980360946,19.7803754208646,3.00115730710692,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,1.5107877947794,0,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,2.79317411380722,3.07320490357441,6.07766792670735,3.5634237646757,3.30918315210025,11.3345831178824,10.5077879191836,14.1204452220399,10.3605856823157,12.673964994512,10.9403278003924,9.08322622457859,8.51534526984761,6.94969174362921,7.62069906052918,10.1978206831473,10.0312794641127,5.76920261124629,11.481515770483,9.60033906679163,9.40621772644489,8.58370283810355,7.1219744149841,10.3520318456864,9.39222147597609,8.23175877927476,10.5227884575137,8.28405094459757,7.2948495315506,10.0839765405548,8.0773675547962,9.00308294973317,7.7468420592983,8.68079749415136,5.9954538705107,8.88940112092552,5.58664740525576,5.7386499620653,7.0589254118245,8.11537424671475 | |||
|short_description=p2@Adam12 | |||
}} | |||
Revision as of 12:07, 14 September 2013
| Short description: | p2@Adam12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Adam12_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1839 |
| Association with transcript: | 0bp_to_ENSMUST00000067680, NM_007400, uc009kdp.1_5end |
| EntrezGene: | Adam12 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 1.94e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| autonomic nervous system | 1.94e-07 | 9 |
| peripheral nervous system | 6.56e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
