FFCP PHASE1:Mm9::chr7:36340309..36340372,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=110959|HGNC=|UniProt=|association_with_transcript=-96bp_to_ENSMUST00000142930_5end|description=CAGE_peak_3_at_Nudt19_5end|id=chr7:36340309..36340372,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.47e-10!59;UBERON:0000160!2.25e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.48e-09,47;UBERON:0000160,3.32e-08,31|phase1_expression=4.16387002472464,8.02643437570531,8.18998630901165,13.0059610861937,7.51343594919521,14.1018588405987,14.2503710763271,10.5881125222093,13.938083493015,16.6185813688615,24.4841694562472,29.6752431462651,12.6688540149092,13.8998439846206,30.3129883252253,15.1856450542369,26.5833513688696,8.51747846467242,9.04955261797876,10.1853516431527,8.75945888556019,26.7092658730381,30.2991755401165,20.1590452719692,13.9939661450974,14.9300310669905,18.5227658348402,13.1437451938392,24.3229976904159,22.6827116783938,15.299405235216,35.5617177137393,26.4477858661365,0,28.3074587356249,43.221007793208,33.4837744270285,1.25559489221072,2.3440060335714,3.14114246384279,0,0.683045484958446,1.45653105909346,7.05022180663233,5.98123894195136,4.77221555620372,10.9534788208725,4.57852828398938,1.75748946187577,3.30530828426282,5.03951117851305,1.43752564364972,4.19456515144341,13.7818806982155,11.7632829699862,5.40244815675489,9.16907007804022,3.6097046459421,14.3644687210314,19.5726662330652,14.5781222806421,3.72728985276045,8.00365316500025,7.19919773825119,1.97773272513395,14.209602298922,5.39280198933128,1.92109152660777,1.45165457231869,1.75507719831198,0.630974884054146,30.564655331207,29.5963844875162,3.06226998037385,2.30029130443767,2.75765635983006,36.3382407297983,22.0899094887375,24.4234387877427,13.4524013484798,14.3635600455783,10.939180781692,30.9893128891533,21.9477417912355,23.3781319098519,17.3830865429464,26.4811326286331,21.9951346073855,7.19398836665249,4.53429360640713,11.0148505706638,7.74381489283248,9.51959867190851,6.47643829965381,12.3457519315057,12.9927797258227,14.7466641138339,9.20323741921512,8.05336614268893,8.48014978824817,6.61964072950398,1.28326477414318,0,0,11.2575341325831,9.62767488805375,9.60496445528088,14.5013527243206,10.8753911131812,7.71899123137089,8.15381035800839,6.69824052286711,4.84292544237723,6.48107354376277,5.29149182110672,6.78599593180248,3.21353458054686,10.8449517689934,11.4999371753484,6.63244084784378,12.8088080707028,8.24287930329878,18.6391761218122,16.9812862266697,8.16842156572475,26.3120766864849,7.18890747035522,8.99854096490112,7.62421362438388,43.5890760668034,24.7050325522058,6.03140890141749,18.7730265807659,16.1100738118108,32.8305110404105,24.4984307232314,5.70300437561771,9.45492976636707,10.3616330957807,44.1927897361595,9.10843100738926,7.35686734187113,7.56260945182467,5.42537344208574,4.42237244483631,4.99643509110914,5.80950692270319,26.3877438153796,10.1316956678436,7.75334928688059,4.92663147659057,6.79506770525482,8.34141747676794,3.83077383174383,6.79081050146213,11.3449532086541,11.2354109970118,13.1247432628505,9.37739548005456,21.9553318887632,17.3549284386011,13.1445304866541,17.992599904476,19.8731874064878,18.8205877722601,24.8811320882936,16.6329508867764,14.478902453529,16.1268652915211,14.2825693748813,11.2685645268739,14.6199987425332,19.9790604914856,12.3469905259542,16.1923260394378,4.32199371992995,17.5121954981413,43.1054423661577,10.4511242762265,9.75394021813842,21.3919985794675,28.6390604965146,31.1329261382818,31.3872283085723,22.7773949541366,25.0342411180497,14.8287773192159,12.9321706826748,15.5971269695296,20.6728463990471,27.2333942842115,24.6935178835415,11.1904061562318,8.22589290790047,5.63538678365402,10.7935203758017,13.9645790760691,11.8529535614638,11.1928670709935,27.3078773762264,30.6147519290681,28.2579505380923,11.858105083486,35.3711624118119,33.0219111790181,32.6050062958038,22.1117532313468,23.6353616557368,16.8053062175737,13.2340223227373,19.9426328933294,10.9824565275233,1.43768206527355,5.95425516269605,5.61667811606209,9.34541848404313,15.6075749764064,24.6046195895317,6.28160846566456,13.0749074121634,10.9186534216157,7.97801903143384,7.27539769694356,5.86271901046355,4.76087281772027,4.48807390072937,5.35959489961049,3.32197034473162,4.30527875375215,5.40748938561935,3.7990696010497,5.20736610893442,16.5870412333199,17.9488875660174,17.2117495556663,11.5893433447988,36.284433337241,29.6545567078274,15.7377547561608,9.3414243065618,5.99465616890888,7.80877488593277,9.26320610251035,4.54040716109849,2.67358408898873,4.24614796183249,8.09621403349789,5.55286130031493,4.74345333535828,23.7777774152137,6.10342366395555,5.52003371368491,6.02681749608232,8.24850614862677,9.2921596837974,14.0812768969889,18.7440605318146,20.7465587731488,15.651000322681,18.4461088766356,10.8539883130653,13.0872142611902,11.0514187299264,13.2735438333043,15.8127912862498,4.12542172992747,14.9793426531667,9.72329907769075,5.56242340265844,8.35914436623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| ||
|EntrezGene=110959 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-96bp_to_ENSMUST00000142930_5end | |||
|description=CAGE_peak_3_at_Nudt19_5end | |||
|id=chr7:36340309..36340372,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.47e-10!59;UBERON:0000160!2.25e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.48e-09,47;UBERON:0000160,3.32e-08,31 | |||
|phase1_expression=4.16387002472464,8.02643437570531,8.18998630901165,13.0059610861937,7.51343594919521,14.1018588405987,14.2503710763271,10.5881125222093,13.938083493015,16.6185813688615,24.4841694562472,29.6752431462651,12.6688540149092,13.8998439846206,30.3129883252253,15.1856450542369,26.5833513688696,8.51747846467242,9.04955261797876,10.1853516431527,8.75945888556019,26.7092658730381,30.2991755401165,20.1590452719692,13.9939661450974,14.9300310669905,18.5227658348402,13.1437451938392,24.3229976904159,22.6827116783938,15.299405235216,35.5617177137393,26.4477858661365,0,28.3074587356249,43.221007793208,33.4837744270285,1.25559489221072,2.3440060335714,3.14114246384279,0,0.683045484958446,1.45653105909346,7.05022180663233,5.98123894195136,4.77221555620372,10.9534788208725,4.57852828398938,1.75748946187577,3.30530828426282,5.03951117851305,1.43752564364972,4.19456515144341,13.7818806982155,11.7632829699862,5.40244815675489,9.16907007804022,3.6097046459421,14.3644687210314,19.5726662330652,14.5781222806421,3.72728985276045,8.00365316500025,7.19919773825119,1.97773272513395,14.209602298922,5.39280198933128,1.92109152660777,1.45165457231869,1.75507719831198,0.630974884054146,30.564655331207,29.5963844875162,3.06226998037385,2.30029130443767,2.75765635983006,36.3382407297983,22.0899094887375,24.4234387877427,13.4524013484798,14.3635600455783,10.939180781692,30.9893128891533,21.9477417912355,23.3781319098519,17.3830865429464,26.4811326286331,21.9951346073855,7.19398836665249,4.53429360640713,11.0148505706638,7.74381489283248,9.51959867190851,6.47643829965381,12.3457519315057,12.9927797258227,14.7466641138339,9.20323741921512,8.05336614268893,8.48014978824817,6.61964072950398,1.28326477414318,0,0,11.2575341325831,9.62767488805375,9.60496445528088,14.5013527243206,10.8753911131812,7.71899123137089,8.15381035800839,6.69824052286711,4.84292544237723,6.48107354376277,5.29149182110672,6.78599593180248,3.21353458054686,10.8449517689934,11.4999371753484,6.63244084784378,12.8088080707028,8.24287930329878,18.6391761218122,16.9812862266697,8.16842156572475,26.3120766864849,7.18890747035522,8.99854096490112,7.62421362438388,43.5890760668034,24.7050325522058,6.03140890141749,18.7730265807659,16.1100738118108,32.8305110404105,24.4984307232314,5.70300437561771,9.45492976636707,10.3616330957807,44.1927897361595,9.10843100738926,7.35686734187113,7.56260945182467,5.42537344208574,4.42237244483631,4.99643509110914,5.80950692270319,26.3877438153796,10.1316956678436,7.75334928688059,4.92663147659057,6.79506770525482,8.34141747676794,3.83077383174383,6.79081050146213,11.3449532086541,11.2354109970118,13.1247432628505,9.37739548005456,21.9553318887632,17.3549284386011,13.1445304866541,17.992599904476,19.8731874064878,18.8205877722601,24.8811320882936,16.6329508867764,14.478902453529,16.1268652915211,14.2825693748813,11.2685645268739,14.6199987425332,19.9790604914856,12.3469905259542,16.1923260394378,4.32199371992995,17.5121954981413,43.1054423661577,10.4511242762265,9.75394021813842,21.3919985794675,28.6390604965146,31.1329261382818,31.3872283085723,22.7773949541366,25.0342411180497,14.8287773192159,12.9321706826748,15.5971269695296,20.6728463990471,27.2333942842115,24.6935178835415,11.1904061562318,8.22589290790047,5.63538678365402,10.7935203758017,13.9645790760691,11.8529535614638,11.1928670709935,27.3078773762264,30.6147519290681,28.2579505380923,11.858105083486,35.3711624118119,33.0219111790181,32.6050062958038,22.1117532313468,23.6353616557368,16.8053062175737,13.2340223227373,19.9426328933294,10.9824565275233,1.43768206527355,5.95425516269605,5.61667811606209,9.34541848404313,15.6075749764064,24.6046195895317,6.28160846566456,13.0749074121634,10.9186534216157,7.97801903143384,7.27539769694356,5.86271901046355,4.76087281772027,4.48807390072937,5.35959489961049,3.32197034473162,4.30527875375215,5.40748938561935,3.7990696010497,5.20736610893442,16.5870412333199,17.9488875660174,17.2117495556663,11.5893433447988,36.284433337241,29.6545567078274,15.7377547561608,9.3414243065618,5.99465616890888,7.80877488593277,9.26320610251035,4.54040716109849,2.67358408898873,4.24614796183249,8.09621403349789,5.55286130031493,4.74345333535828,23.7777774152137,6.10342366395555,5.52003371368491,6.02681749608232,8.24850614862677,9.2921596837974,14.0812768969889,18.7440605318146,20.7465587731488,15.651000322681,18.4461088766356,10.8539883130653,13.0872142611902,11.0514187299264,13.2735438333043,15.8127912862498,4.12542172992747,14.9793426531667,9.72329907769075,5.56242340265844,8.3591443662321,8.51233121482913,5.35106452806212,8.88564711251453,5.48036908406279,11.7335854031855,6.35496212591461,9.04166432025344,6.5954501176592,2.42196640043858,6.27254419252821,6.92359595218192,8.86360858623331,19.2377352175701,33.1911290598812,20.5045056957423,12.7959858137198,16.4823129359043,25.8064786096427,17.7702496037333,19.2173665493479,9.34881364966204,11.1961161858926,6.21899882119907,16.2294005062569,9.80641580101519,9.75933442208874,13.608672943547,11.290767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| |||
|short_description=p3@Nudt19 | |||
}} | |||
Revision as of 13:23, 14 September 2013
| Short description: | p3@Nudt19 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Nudt19_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -96bp_to_ENSMUST00000142930_5end |
| EntrezGene: | Nudt19 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 1.48e-09 | 47 |
| intestine | 3.32e-08 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
