FFCP PHASE1:Mm9::chr7:53631818..53631829,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17927|HGNC=|MCL_coexpression_id=449|UniProt=P10085|association_with_transcript=-14bp_to_ENSMUST00000072514,NM_010866,uc012fkv.1_5end|description=CAGE_peak_2_at_Myod1_5end|id=chr7:53631818..53631829,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000026!4.67e-11!13;UBERON:0004708!4.67e-11!13;UBERON:0002101!4.67e-11!13;UBERON:0004357!4.67e-11!13;UBERON:0009872!4.67e-11!13;UBERON:0004347!4.67e-11!13;UBERON:0005732!4.67e-11!13;UBERON:0005733!4.67e-11!13;UBERON:0003102!3.37e-10!23|ontology_enrichment_uberon_v019_2=UBERON:0000026,5.57e-16,12;UBERON:0004708,5.57e-16,12;UBERON:0002101,5.57e-16,12;UBERON:0004357,5.57e-16,12;UBERON:0004347,5.57e-16,12;UBERON:0005732,5.57e-16,12;UBERON:0005733,5.57e-16,12;UBERON:0010707,1.56e-14,13;UBERON:0002102,1.79e-11,7;UBERON:0004710,1.79e-11,7;UBERON:0005419,1.79e-11,7;UBERON:0005417,1.79e-11,7;UBERON:0005729,1.79e-11,7;UBERON:0010708,7.06e-10,8;UBERON:0003102,1.75e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0,0.461230994512117,0,0.117588707135705,0,0,0,2.65383165584962,5.66183974815932,2.65009822152472,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,1.04096354370163,1.60931473103431,0.540186389416048,1.20563854268572,0.204109497453984,1.0249097622788,0.655912071918102,0.776110112217047,1.94011193639558,5.67318240503458,3.51902248327898,5.69908904311695,3.89266148915837,1.74126083261083,1.4404749548556,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,1.51593129416388,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0.220528398054962,0.49465875882444,0,0.72375509913787,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.418176592028937,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86817225651518,1.59609949360412,2.73173769206615,3.16038732188782,4.61148957781561,2.02227859295016,2.889207461421,3.91466608753899,4.49286893428541,3.03236654116557,4.81610669791456,3.2066478035633,2.24739617927718,2.04880487695582,3.33125719942557,3.81034953026459,3.1288768005111,3.08654752741928,2.88460130562315,2.50238164228475,1.71434626192708,2.12970967391205,1.90748951957857,1.88950341622027,2.54095327121393,1.94613598150856,1.28049581010941,2.36762740294059,2.03706170768793,2.24456908663095,1.77952527186261,3.05363895364247,4.50154147486658,2.63392630016142,2.70069255373598,3.49734809113124,1.40358965067245,0.859484216193193,1.91288332068843,5.07360263974886,3.2461496986859|short_description=p2@Myod1}} | ||
|EntrezGene=17927 | |||
|HGNC= | |||
|MCL_coexpression_id=449 | |||
|UniProt=P10085 | |||
|association_with_transcript=-14bp_to_ENSMUST00000072514,NM_010866,uc012fkv.1_5end | |||
|description=CAGE_peak_2_at_Myod1_5end | |||
|id=chr7:53631818..53631829,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!4.67e-11!13;UBERON:0004708!4.67e-11!13;UBERON:0002101!4.67e-11!13;UBERON:0004357!4.67e-11!13;UBERON:0009872!4.67e-11!13;UBERON:0004347!4.67e-11!13;UBERON:0005732!4.67e-11!13;UBERON:0005733!4.67e-11!13;UBERON:0003102!3.37e-10!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000026,5.57e-16,12;UBERON:0004708,5.57e-16,12;UBERON:0002101,5.57e-16,12;UBERON:0004357,5.57e-16,12;UBERON:0004347,5.57e-16,12;UBERON:0005732,5.57e-16,12;UBERON:0005733,5.57e-16,12;UBERON:0010707,1.56e-14,13;UBERON:0002102,1.79e-11,7;UBERON:0004710,1.79e-11,7;UBERON:0005419,1.79e-11,7;UBERON:0005417,1.79e-11,7;UBERON:0005729,1.79e-11,7;UBERON:0010708,7.06e-10,8;UBERON:0003102,1.75e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0,0,0,0.693941307064543,0,0.461230994512117,0,0.117588707135705,0,0,0,2.65383165584962,5.66183974815932,2.65009822152472,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,1.04096354370163,1.60931473103431,0.540186389416048,1.20563854268572,0.204109497453984,1.0249097622788,0.655912071918102,0.776110112217047,1.94011193639558,5.67318240503458,3.51902248327898,5.69908904311695,3.89266148915837,1.74126083261083,1.4404749548556,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0,0,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,1.51593129416388,0.162964976442026,0,0,0,0.238043640886014,0.390267295715598,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,5.30188947129183,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0,0.220528398054962,0.49465875882444,0,0.72375509913787,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.418176592028937,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86817225651518,1.59609949360412,2.73173769206615,3.16038732188782,4.61148957781561,2.02227859295016,2.889207461421,3.91466608753899,4.49286893428541,3.03236654116557,4.81610669791456,3.2066478035633,2.24739617927718,2.04880487695582,3.33125719942557,3.81034953026459,3.1288768005111,3.08654752741928,2.88460130562315,2.50238164228475,1.71434626192708,2.12970967391205,1.90748951957857,1.88950341622027,2.54095327121393,1.94613598150856,1.28049581010941,2.36762740294059,2.03706170768793,2.24456908663095,1.77952527186261,3.05363895364247,4.50154147486658,2.63392630016142,2.70069255373598,3.49734809113124,1.40358965067245,0.859484216193193,1.91288332068843,5.07360263974886,3.2461496986859 | |||
|short_description=p2@Myod1 | |||
}} |
Revision as of 13:50, 14 September 2013
Short description: | p2@Myod1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Myod1_5end |
Coexpression cluster: | MCL_coexpression_mm9:449 |
Association with transcript: | -14bp_to_ENSMUST00000072514, NM_010866, uc012fkv.1_5end |
EntrezGene: | Myod1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
appendage | 5.57e-16 | 12 |
paired limb/fin | 5.57e-16 | 12 |
limb | 5.57e-16 | 12 |
paired limb/fin bud | 5.57e-16 | 12 |
limb bud | 5.57e-16 | 12 |
limb/fin field | 5.57e-16 | 12 |
limb field | 5.57e-16 | 12 |
appendage girdle complex | 1.56e-14 | 13 |
forelimb | 1.79e-11 | 7 |
pectoral appendage | 1.79e-11 | 7 |
pectoral appendage bud | 1.79e-11 | 7 |
forelimb bud | 1.79e-11 | 7 |
forelimb/pectoral fin field | 1.79e-11 | 7 |
pectoral complex | 7.06e-10 | 8 |
surface structure | 1.75e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.