FFCP PHASE1:Mm9::chr8:28582047..28582054,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=143|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:28582047..28582054,+|id=chr8:28582047..28582054,+|ontology_enrichment_celltype=CL:0000624!2.22e-11!8;CL:0000893!2.30e-11!6;CL:0002489!2.30e-11!6;CL:0000898!2.30e-11!6;CL:0000809!2.30e-11!6;CL:0000810!2.30e-11!6;CL:0000895!2.30e-11!6;CL:0000808!2.30e-11!6;CL:0000894!2.30e-11!6;CL:0000806!2.30e-11!6;CL:0000807!2.30e-11!6;CL:0000805!2.30e-11!6;CL:0002425!2.30e-11!6;CL:0002436!2.30e-11!6;CL:0002427!2.30e-11!6;CL:0002428!2.30e-11!6;CL:0002429!2.30e-11!6;CL:0002433!2.30e-11!6;CL:0002431!2.30e-11!6;CL:0002432!2.30e-11!6;CL:0000791!5.81e-10!9;CL:0000789!5.81e-10!9;CL:0002420!5.81e-10!9;CL:0002419!5.81e-10!9;CL:0000790!5.81e-10!9;CL:0000084!6.72e-10!11;CL:0000827!6.72e-10!11;CL:0000838!6.19e-09!12;CL:0002031!3.80e-08!25;CL:0000542!4.03e-08!13;CL:0000051!4.03e-08!13;CL:0000349!5.68e-07!3;CL:0000351!5.68e-07!3|ontology_enrichment_celltype_v019_2=CL:0000349,5.61e-30,3;CL:0000351,5.61e-30,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.85e-08!23;UBERON:0000974!2.85e-08!23;UBERON:0004807!2.85e-08!23;UBERON:0005058!2.85e-08!23;UBERON:0003351!2.85e-08!23;UBERON:0009113!2.85e-08!23;UBERON:0003295!2.85e-08!23;UBERON:0009722!2.85e-08!23;UBERON:0005562!2.85e-08!23;UBERON:0007690!2.85e-08!23;UBERON:0006562!8.18e-08!24;UBERON:0003408!8.18e-08!24;UBERON:0001557!8.18e-08!24;UBERON:0001042!8.18e-08!24;UBERON:0008814!8.18e-08!24;UBERON:0009145!8.18e-08!24;UBERON:0004177!3.19e-07!29;UBERON:0002390!3.85e-07!45;UBERON:0003061!3.85e-07!45;UBERON:0000358!5.68e-07!3;UBERON:0000307!5.68e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.61e-30,3;UBERON:0000307,5.61e-30,3;UBERON:0007010,5.61e-30,3|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.70219357896598,0.34243593645101,0.159544317990673,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.887943813496259,2.15313255862742,0.335769232728157,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:28582047..28582054,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=143 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:28582047..28582054,+ | |||
|id=chr8:28582047..28582054,+ | |||
|ontology_enrichment_celltype=CL:0000624!2.22e-11!8;CL:0000893!2.30e-11!6;CL:0002489!2.30e-11!6;CL:0000898!2.30e-11!6;CL:0000809!2.30e-11!6;CL:0000810!2.30e-11!6;CL:0000895!2.30e-11!6;CL:0000808!2.30e-11!6;CL:0000894!2.30e-11!6;CL:0000806!2.30e-11!6;CL:0000807!2.30e-11!6;CL:0000805!2.30e-11!6;CL:0002425!2.30e-11!6;CL:0002436!2.30e-11!6;CL:0002427!2.30e-11!6;CL:0002428!2.30e-11!6;CL:0002429!2.30e-11!6;CL:0002433!2.30e-11!6;CL:0002431!2.30e-11!6;CL:0002432!2.30e-11!6;CL:0000791!5.81e-10!9;CL:0000789!5.81e-10!9;CL:0002420!5.81e-10!9;CL:0002419!5.81e-10!9;CL:0000790!5.81e-10!9;CL:0000084!6.72e-10!11;CL:0000827!6.72e-10!11;CL:0000838!6.19e-09!12;CL:0002031!3.80e-08!25;CL:0000542!4.03e-08!13;CL:0000051!4.03e-08!13;CL:0000349!5.68e-07!3;CL:0000351!5.68e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.61e-30,3;CL:0000351,5.61e-30,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.85e-08!23;UBERON:0000974!2.85e-08!23;UBERON:0004807!2.85e-08!23;UBERON:0005058!2.85e-08!23;UBERON:0003351!2.85e-08!23;UBERON:0009113!2.85e-08!23;UBERON:0003295!2.85e-08!23;UBERON:0009722!2.85e-08!23;UBERON:0005562!2.85e-08!23;UBERON:0007690!2.85e-08!23;UBERON:0006562!8.18e-08!24;UBERON:0003408!8.18e-08!24;UBERON:0001557!8.18e-08!24;UBERON:0001042!8.18e-08!24;UBERON:0008814!8.18e-08!24;UBERON:0009145!8.18e-08!24;UBERON:0004177!3.19e-07!29;UBERON:0002390!3.85e-07!45;UBERON:0003061!3.85e-07!45;UBERON:0000358!5.68e-07!3;UBERON:0000307!5.68e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,5.61e-30,3;UBERON:0000307,5.61e-30,3;UBERON:0007010,5.61e-30,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.422366166455,0.70219357896598,0.34243593645101,0.159544317990673,0.513602189793617,0.262261207256992,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.328281799490123,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.887943813496259,2.15313255862742,0.335769232728157,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:28582047..28582054,+ | |||
}} |
Revision as of 15:28, 14 September 2013
Short description: | p@chr8:28582047..28582054, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:28582047..28582054, + |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.61e-30 | 3 |
trophoblast cell | 5.61e-30 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 5.61e-30 | 3 |
blastula | 5.61e-30 | 3 |
cleaving embryo | 5.61e-30 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.